FFCP PHASE1:Mm9::chr12:115630425..115630437,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENSMUST00000103486_5end | |association_with_transcript=-45bp_to_ENSMUST00000103486_5end | ||
|cluster_id=chr12:115630425..115630437,- | |||
|description=CAGE_peak_2_at_ENSMUST00000103486_5end | |description=CAGE_peak_2_at_ENSMUST00000103486_5end | ||
|id=chr12:115630425..115630437,- | |id=chr12:115630425..115630437,- | ||
|ontology_enrichment_celltype=CL:0000553!2.91e-08!6;CL:0000556!2.91e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.12e-13,6;CL:0000556,1.12e-13,6;CL:0000050,8.61e-09,9;CL:0002027,1.58e-07,3;CL:0002006,1.58e-07,3;CL:0002024,1.58e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.25e-09!128;UBERON:0001555!1.25e-09!128;UBERON:0007026!1.25e-09!128;UBERON:0004119!3.04e-09!130;UBERON:0000925!3.04e-09!130;UBERON:0006595!3.04e-09!130;UBERON:0004921!1.38e-08!126;UBERON:0004185!1.38e-08!126;UBERON:0007023!2.01e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.55e-10,51;UBERON:0002193,1.22e-08,48;UBERON:0002405,1.22e-08,48;UBERON:0002106,1.41e-08,6;UBERON:0004457,1.41e-08,6;UBERON:0000042,1.41e-08,6;UBERON:0004854,1.41e-08,6;UBERON:0009034,1.41e-08,6;UBERON:0002095,1.41e-08,6;UBERON:0004782,1.41e-08,6;UBERON:0003281,1.41e-08,6;UBERON:0009664,1.41e-08,6;UBERON:0002296,1.41e-08,6;UBERON:0005602,1.41e-08,6;UBERON:0001179,1.41e-08,6;UBERON:0006293,1.41e-08,6;UBERON:0002075,1.54e-08,19;UBERON:0002465,5.66e-07,3;UBERON:0003887,6.67e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9624399850313,111.766347599184,16.7894850750755,108.992178131271,142.187667649151,57.2926029927341,0.17008658030214,0,0,2.87986361028132,5.04700418347774,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,28.019695211642,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,220.097201100096,0,0,0,0,0,0.117588707135705,0,0,2.74738778147832,5.30766331169925,0.323533699894818,1.98757366614354,0.969750506270444,11.1835056730873,0.292780797011547,0,16.3492515333498,0,0,0.127070227073065,0,0,0,0,0,0,0,0,4.47865094196335,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46199987425332,0.658650345873152,0.671032093801859,0,0,3.96502539580558,17.982638533121,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.72910439899755,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,1.62135226775035,0.823684239564244,1.43768206527355,0,0.936113019343682,0,0,0,3.14080423283228,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,2.45794972073607,1.72684981865896,0.867894351489069,0,0,3.44234991113325,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0,0,2.65490276679926,0,0,0,0,0,0.258428293168221,0.363533729477506,0,2.84433082142234,4.21674434299995,1.03135543248187,0,0,0,0,0,0,0,0,0,0,5.51320995137405,0.49465875882444,0,0,0,0,0.582961673259701,0.370850604021019,88.3402453724898,0,1.11116716421827,4.52084296811258,18.0436380591753,22.4202609742392,0.849892149969277,1.6794174278839,1.93479963326193,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0.388844919875379,18.0188400795208,0,0,0,0,0,0,0,0.13020438484395,0,0,0,7.90027801570446,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,1.36441033035653,1.15454209968395,0.818138315270983,0,0,0,0,9.46629010757733,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9624399850313,111.766347599184,16.7894850750755,108.992178131271,142.187667649151,57.2926029927341,0.17008658030214,0,0,2.87986361028132,5.04700418347774,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,28.019695211642,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,220.097201100096,0,0,0,0,0,0.117588707135705,0,0,2.74738778147832,5.30766331169925,0.323533699894818,1.98757366614354,0.969750506270444,11.1835056730873,0.292780797011547,0,16.3492515333498,0,0,0.127070227073065,0,0,0,0,0,0,0,0,4.47865094196335,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46199987425332,0.658650345873152,0.671032093801859,0,0,3.96502539580558,17.982638533121,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.72910439899755,12.3467589417708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,1.62135226775035,0.823684239564244,1.43768206527355,0,0.936113019343682,0,0,0,3.14080423283228,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,2.45794972073607,1.72684981865896,0.867894351489069,0,0,3.44234991113325,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.70328102249922,0,0,0,2.65490276679926,0,0,0,0,0,0.258428293168221,0.363533729477506,0,2.84433082142234,4.21674434299995,1.03135543248187,0,0,0,0,0,0,0,0,0,0,5.51320995137405,0.49465875882444,0,0,0,0,0.582961673259701,0.370850604021019,88.3402453724898,0,1.11116716421827,4.52084296811258,18.0436380591753,22.4202609742392,0.849892149969277,1.6794174278839,1.93479963326193,0.954670618015114,0,0,0,0,0,0.134864346384821,0,0,0.388844919875379,18.0188400795208,0,0,0,0,0,0,0,0.13020438484395,0,0,0,7.90027801570446,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,1.36441033035653,1.15454209968395,0.818138315270983,0,0,0,0,9.46629010757733,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p2@ENSMUST00000103486 | |short_description=p2@ENSMUST00000103486 | ||
}} | }} |
Latest revision as of 20:13, 4 August 2015
Short description: | p2@ENSMUST00000103486 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000103486_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -45bp_to_ENSMUST00000103486_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.12e-13 | 6 |
megakaryocyte | 1.12e-13 | 6 |
megakaryocyte-erythroid progenitor cell | 8.61e-09 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.58e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.58e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.55e-10 | 51 |
hemolymphoid system | 1.22e-08 | 48 |
immune system | 1.22e-08 | 48 |
spleen | 1.41e-08 | 6 |
cavity lining | 1.41e-08 | 6 |
serous membrane | 1.41e-08 | 6 |
gastrointestinal system mesentery | 1.41e-08 | 6 |
stomach region | 1.41e-08 | 6 |
mesentery | 1.41e-08 | 6 |
gastrointestinal system serosa | 1.41e-08 | 6 |
mesentery of stomach | 1.41e-08 | 6 |
gut mesentery | 1.41e-08 | 6 |
dorsal mesentery | 1.41e-08 | 6 |
dorsal mesogastrium | 1.41e-08 | 6 |
peritoneal cavity | 1.41e-08 | 6 |
spleen primordium | 1.41e-08 | 6 |
viscus | 1.54e-08 | 19 |
lymphoid system | 5.66e-07 | 3 |
intraembryonic coelom | 6.67e-07 | 10 |