FFCP PHASE1:Mm9::chr12:115561236..115561248,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:115561236..115561248,+ to FFCP PHASE1:Mm9::chr12:115561236..115561248,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:115561236..115561248,+ | |||
|description=CAGE_peak_at_chr12:115561236..115561248,+ | |||
|id=chr12:115561236..115561248,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.22e-11!6;CL:0000556!2.22e-11!6;CL:0000050!2.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.88e-24,6;CL:0000556,4.88e-24,6;CL:0000050,3.54e-16,9;CL:0000839,2.58e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.97e-09,16;CL:0002031,5.39e-09,25;CL:0000049,7.75e-08,19;CL:0000988,4.94e-07,32;CL:0002032,4.94e-07,32;CL:0000037,4.94e-07,32;CL:0000837,4.94e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.68e-07!48;UBERON:0002106!3.25e-07!6;UBERON:0004457!3.25e-07!6;UBERON:0000042!3.25e-07!6;UBERON:0004854!3.25e-07!6;UBERON:0009034!3.25e-07!6;UBERON:0002095!3.25e-07!6;UBERON:0004782!3.25e-07!6;UBERON:0003281!3.25e-07!6;UBERON:0009664!3.25e-07!6;UBERON:0002296!3.25e-07!6;UBERON:0005602!3.25e-07!6;UBERON:0001179!3.25e-07!6;UBERON:0006293!3.25e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.50e-13,6;UBERON:0004457,1.50e-13,6;UBERON:0000042,1.50e-13,6;UBERON:0004854,1.50e-13,6;UBERON:0009034,1.50e-13,6;UBERON:0002095,1.50e-13,6;UBERON:0004782,1.50e-13,6;UBERON:0003281,1.50e-13,6;UBERON:0009664,1.50e-13,6;UBERON:0002296,1.50e-13,6;UBERON:0005602,1.50e-13,6;UBERON:0001179,1.50e-13,6;UBERON:0006293,1.50e-13,6;UBERON:0002193,2.14e-11,48;UBERON:0002405,2.14e-11,48;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0002390,2.70e-09,45;UBERON:0003061,2.70e-09,45;UBERON:0002371,2.97e-09,16;UBERON:0003887,2.22e-08,10;UBERON:0002075,1.43e-07,19;UBERON:0001474,8.39e-07,22;UBERON:0004765,8.39e-07,22;UBERON:0001434,8.39e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,0,6.62470547252299,6.85572168028694,6.79023442876848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0.376736914009382,1.91371918809435,2.0590035588587,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,0,6.62470547252299,6.85572168028694,6.79023442876848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0.376736914009382,1.91371918809435,2.0590035588587,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr12:115561236..115561248,+ | |||
}} | }} |
Latest revision as of 20:13, 4 August 2015
Short description: | p@chr12:115561236..115561248, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:115561236..115561248, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.88e-24 | 6 |
megakaryocyte | 4.88e-24 | 6 |
megakaryocyte-erythroid progenitor cell | 3.54e-16 | 9 |
myeloid lineage restricted progenitor cell | 2.58e-11 | 13 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
myeloid cell | 2.97e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 5.39e-09 | 25 |
common myeloid progenitor | 7.75e-08 | 19 |
hematopoietic cell | 4.94e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.94e-07 | 32 |
hematopoietic stem cell | 4.94e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.94e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.50e-13 | 6 |
cavity lining | 1.50e-13 | 6 |
serous membrane | 1.50e-13 | 6 |
gastrointestinal system mesentery | 1.50e-13 | 6 |
stomach region | 1.50e-13 | 6 |
mesentery | 1.50e-13 | 6 |
gastrointestinal system serosa | 1.50e-13 | 6 |
mesentery of stomach | 1.50e-13 | 6 |
gut mesentery | 1.50e-13 | 6 |
dorsal mesentery | 1.50e-13 | 6 |
dorsal mesogastrium | 1.50e-13 | 6 |
peritoneal cavity | 1.50e-13 | 6 |
spleen primordium | 1.50e-13 | 6 |
hemolymphoid system | 2.14e-11 | 48 |
immune system | 2.14e-11 | 48 |
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
hematopoietic system | 2.70e-09 | 45 |
blood island | 2.70e-09 | 45 |
bone marrow | 2.97e-09 | 16 |
intraembryonic coelom | 2.22e-08 | 10 |
viscus | 1.43e-07 | 19 |
bone element | 8.39e-07 | 22 |
skeletal element | 8.39e-07 | 22 |
skeletal system | 8.39e-07 | 22 |