FFCP PHASE1:Mm9::chr12:114667701..114667713,-: Difference between revisions
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|id=chr12:114667701..114667713,-
|short_description=p1@uc007pgg.1
|description=CAGE_peak_1_at_uc007pgg.1_5end
|association_with_transcript=10bp_to_uc007pgg.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=192 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_uc007pgg.1_5end | |||
|cluster_id=chr12:114667701..114667713,- | |||
|description=CAGE_peak_1_at_uc007pgg.1_5end | |||
|id=chr12:114667701..114667713,- | |||
|ontology_enrichment_celltype=CL:0000553!6.19e-13!6;CL:0000556!6.19e-13!6;CL:0000050!2.76e-08!9;CL:0002027!3.22e-07!3;CL:0002006!3.22e-07!3;CL:0002024!3.22e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.95e-30,6;CL:0000556,3.95e-30,6;CL:0000050,5.59e-20,9;CL:0002027,9.20e-16,3;CL:0002006,9.20e-16,3;CL:0002024,9.20e-16,3;CL:0000839,1.03e-13,13;CL:0000763,4.64e-11,16;CL:0000049,3.06e-09,19;CL:0002031,3.18e-09,25;CL:0000988,4.82e-07,32;CL:0002032,4.82e-07,32;CL:0000037,4.82e-07,32;CL:0000837,4.82e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.99e-09!51;UBERON:0002465!2.56e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.18e-16,3;UBERON:0002193,9.64e-16,48;UBERON:0002405,9.64e-16,48;UBERON:0002371,4.64e-11,16;UBERON:0001962,5.51e-11,2;UBERON:0001961,5.51e-11,2;UBERON:0001744,5.51e-11,2;UBERON:0002390,1.15e-09,45;UBERON:0003061,1.15e-09,45;UBERON:0001474,6.46e-08,22;UBERON:0004765,6.46e-08,22;UBERON:0001434,6.46e-08,22;UBERON:0002106,7.92e-08,6;UBERON:0004457,7.92e-08,6;UBERON:0000042,7.92e-08,6;UBERON:0004854,7.92e-08,6;UBERON:0009034,7.92e-08,6;UBERON:0002095,7.92e-08,6;UBERON:0004782,7.92e-08,6;UBERON:0003281,7.92e-08,6;UBERON:0009664,7.92e-08,6;UBERON:0002296,7.92e-08,6;UBERON:0005602,7.92e-08,6;UBERON:0001179,7.92e-08,6;UBERON:0006293,7.92e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,5.3297561890506,5.4668322195253,3.49780939064073,6.62470547252299,10.4206969540361,3.39511721438424,0.255129870453209,0.397163804803541,0,4.31979541542198,4.35877634027623,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,17.3488382043605,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,8.43008282188352,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.863424909329478,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22702756308404,0.206386867963223,0,0,1.36694227721025,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,5.3297561890506,5.4668322195253,3.49780939064073,6.62470547252299,10.4206969540361,3.39511721438424,0.255129870453209,0.397163804803541,0,4.31979541542198,4.35877634027623,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02008690903925,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,17.3488382043605,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,8.43008282188352,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.863424909329478,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22702756308404,0.206386867963223,0,0,1.36694227721025,1.37266903923914,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p1@uc007pgg.1 | |||
}} | }} |
Latest revision as of 19:58, 4 August 2015
Short description: | p1@uc007pgg.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007pgg.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | 10bp_to_uc007pgg.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.95e-30 | 6 |
megakaryocyte | 3.95e-30 | 6 |
megakaryocyte-erythroid progenitor cell | 5.59e-20 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 9.20e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.20e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.20e-16 | 3 |
myeloid lineage restricted progenitor cell | 1.03e-13 | 13 |
myeloid cell | 4.64e-11 | 16 |
common myeloid progenitor | 3.06e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 3.18e-09 | 25 |
hematopoietic cell | 4.82e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.82e-07 | 32 |
hematopoietic stem cell | 4.82e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.82e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.18e-16 | 3 |
hemolymphoid system | 9.64e-16 | 48 |
immune system | 9.64e-16 | 48 |
bone marrow | 4.64e-11 | 16 |
gut-associated lymphoid tissue | 5.51e-11 | 2 |
mucosa-associated lymphoid tissue | 5.51e-11 | 2 |
lymphoid tissue | 5.51e-11 | 2 |
hematopoietic system | 1.15e-09 | 45 |
blood island | 1.15e-09 | 45 |
bone element | 6.46e-08 | 22 |
skeletal element | 6.46e-08 | 22 |
skeletal system | 6.46e-08 | 22 |
spleen | 7.92e-08 | 6 |
cavity lining | 7.92e-08 | 6 |
serous membrane | 7.92e-08 | 6 |
gastrointestinal system mesentery | 7.92e-08 | 6 |
stomach region | 7.92e-08 | 6 |
mesentery | 7.92e-08 | 6 |
gastrointestinal system serosa | 7.92e-08 | 6 |
mesentery of stomach | 7.92e-08 | 6 |
gut mesentery | 7.92e-08 | 6 |
dorsal mesentery | 7.92e-08 | 6 |
dorsal mesogastrium | 7.92e-08 | 6 |
peritoneal cavity | 7.92e-08 | 6 |
spleen primordium | 7.92e-08 | 6 |