FFCP PHASE1:Mm9::chr7:25766629..25766641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=304 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:25766629..25766641,- | |||
|description=CAGE_peak_at_chr7:25766629..25766641,- | |||
|id=chr7:25766629..25766641,- | |||
|ontology_enrichment_celltype=CL:0000117!8.29e-20!23;CL:0000337!8.29e-20!23;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0000393!5.82e-10!39;CL:0000211!5.82e-10!39;CL:0002319!8.86e-10!43;CL:0000221!1.85e-09!44;CL:0000133!1.85e-09!44;CL:0000055!7.97e-08!50;CL:0002610!5.39e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.45e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-26!75;UBERON:0001016!1.09e-26!75;UBERON:0001017!4.75e-26!73;UBERON:0005743!4.75e-26!73;UBERON:0000955!3.19e-25!50;UBERON:0006238!3.19e-25!50;UBERON:0001049!1.21e-23!52;UBERON:0005068!1.21e-23!52;UBERON:0006241!1.21e-23!52;UBERON:0007135!1.21e-23!52;UBERON:0002616!1.30e-23!49;UBERON:0000033!4.85e-22!63;UBERON:0004121!2.17e-21!102;UBERON:0000924!2.17e-21!102;UBERON:0006601!2.17e-21!102;UBERON:0002020!4.03e-20!34;UBERON:0002346!8.06e-20!71;UBERON:0003075!8.06e-20!71;UBERON:0007284!8.06e-20!71;UBERON:0002791!1.81e-17!29;UBERON:0003528!1.81e-17!29;UBERON:0001893!1.81e-17!29;UBERON:0003080!1.49e-16!40;UBERON:0003056!9.42e-16!49;UBERON:0007811!3.25e-15!86;UBERON:0002780!3.26e-15!39;UBERON:0001890!3.26e-15!39;UBERON:0006240!3.26e-15!39;UBERON:0000153!2.99e-13!94;UBERON:0000956!8.69e-11!21;UBERON:0001869!8.69e-11!21;UBERON:0000203!8.69e-11!21;UBERON:0002298!7.62e-09!6;UBERON:0002420!2.89e-08!8;UBERON:0007245!2.89e-08!8;UBERON:0010009!2.89e-08!8;UBERON:0010011!2.89e-08!8;UBERON:0000454!2.89e-08!8;UBERON:0003076!8.52e-08!12;UBERON:0003057!8.52e-08!12;UBERON:0002619!9.82e-08!17;UBERON:0000025!1.16e-07!114;UBERON:0004684!5.39e-07!3;UBERON:0002275!5.39e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.83e-13,73;UBERON:0000073,3.01e-13,54;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,4.36e-13,64;UBERON:0003075,4.36e-13,64;UBERON:0007284,4.36e-13,64;UBERON:0000955,4.83e-13,47;UBERON:0006238,4.83e-13,47;UBERON:0001016,7.16e-13,75;UBERON:0001896,3.38e-12,2;UBERON:0002298,3.38e-12,2;UBERON:0005290,3.38e-12,2;UBERON:0010096,3.38e-12,2;UBERON:0001049,1.08e-11,52;UBERON:0005068,1.08e-11,52;UBERON:0006241,1.08e-11,52;UBERON:0007135,1.08e-11,52;UBERON:0010371,2.93e-11,73;UBERON:0002616,6.34e-11,46;UBERON:0007023,6.67e-10,51;UBERON:0004733,3.98e-09,6;UBERON:0004732,3.98e-09,6;UBERON:0002028,3.98e-09,6;UBERON:0007277,3.98e-09,6;UBERON:0010314,1.45e-08,92;UBERON:0003056,4.91e-08,49;UBERON:0004684,5.45e-08,3;UBERON:0002275,5.45e-08,3;UBERON:0003076,6.49e-08,12;UBERON:0003057,6.49e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.766124028511126,1.0752457327937,0.131886287730194,0.457438218012048,0,0,1.12552522006336,0.45839474333043,0.589257170947335,0.711858403995515,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.80615036115011,0,0,0,0,0,1.04853447583376,2.74500361691176,0.251308704225729,3.82413504423008,0.255715457330331,3.1168206683934,0.324482526135515,0,0,0,0,0,0,0,0,1.36072998302656,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,17.8008289930089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,2.26571204492102,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.766124028511126,1.0752457327937,0.131886287730194,0.457438218012048,0,0,1.12552522006336,0.45839474333043,0.589257170947335,0.711858403995515,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.80615036115011,0,0,0,0,0,1.04853447583376,2.74500361691176,0.251308704225729,3.82413504423008,0.255715457330331,3.1168206683934,0.324482526135515,0,0,0,0,0,0,0,0,1.36072998302656,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,17.8008289930089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,2.26571204492102,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:25766629..25766641,- | |||
}} | }} |
Latest revision as of 19:51, 4 August 2015
Short description: | p@chr7:25766629..25766641, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25766629..25766641, - |
Coexpression cluster: | MCL_coexpression_mm9:304 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.83e-13 | 73 |
regional part of nervous system | 3.01e-13 | 54 |
ectoderm-derived structure | 3.66e-13 | 95 |
ectoderm | 3.66e-13 | 95 |
presumptive ectoderm | 3.66e-13 | 95 |
neurectoderm | 4.36e-13 | 64 |
neural plate | 4.36e-13 | 64 |
presumptive neural plate | 4.36e-13 | 64 |
brain | 4.83e-13 | 47 |
future brain | 4.83e-13 | 47 |
nervous system | 7.16e-13 | 75 |
medulla oblongata | 3.38e-12 | 2 |
brainstem | 3.38e-12 | 2 |
myelencephalon | 3.38e-12 | 2 |
future myelencephalon | 3.38e-12 | 2 |
neural tube | 1.08e-11 | 52 |
neural rod | 1.08e-11 | 52 |
future spinal cord | 1.08e-11 | 52 |
neural keel | 1.08e-11 | 52 |
ecto-epithelium | 2.93e-11 | 73 |
regional part of brain | 6.34e-11 | 46 |
adult organism | 6.67e-10 | 51 |
segmental subdivision of hindbrain | 3.98e-09 | 6 |
segmental subdivision of nervous system | 3.98e-09 | 6 |
hindbrain | 3.98e-09 | 6 |
presumptive hindbrain | 3.98e-09 | 6 |
structure with developmental contribution from neural crest | 1.45e-08 | 92 |
pre-chordal neural plate | 4.91e-08 | 49 |
raphe nuclei | 5.45e-08 | 3 |
reticular formation | 5.45e-08 | 3 |
posterior neural tube | 6.49e-08 | 12 |
chordal neural plate | 6.49e-08 | 12 |