FFCP PHASE1:Mm9::chr12:114660722..114660729,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:114660722..114660729,- to FFCP PHASE1:Mm9::chr12:114660722..114660729,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=372 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:114660722..114660729,- | |||
|description=CAGE_peak_at_chr12:114660722..114660729,- | |||
|id=chr12:114660722..114660729,- | |||
|ontology_enrichment_celltype=CL:0000988!4.86e-10!32;CL:0002032!4.86e-10!32;CL:0000037!4.86e-10!32;CL:0000566!4.86e-10!32;CL:0000837!4.86e-10!32;CL:0000553!7.45e-10!6;CL:0000556!7.45e-10!6;CL:0002031!2.01e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.97e-28,6;CL:0000556,3.97e-28,6;CL:0000050,1.30e-18,9;CL:0002031,6.08e-17,25;CL:0002027,1.44e-14,3;CL:0002006,1.44e-14,3;CL:0002024,1.44e-14,3;CL:0000988,6.65e-13,32;CL:0002032,6.65e-13,32;CL:0000037,6.65e-13,32;CL:0000837,6.65e-13,32;CL:0000839,9.75e-13,13;CL:0002320,2.79e-10,46;CL:0000134,2.79e-10,46;CL:0000763,2.98e-10,16;CL:0000049,1.51e-08,19;CL:0000219,1.70e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.20e-13!48;UBERON:0002405!3.72e-11!70;UBERON:0002390!7.51e-11!45;UBERON:0003061!7.51e-11!45;UBERON:0001474!5.85e-08!22;UBERON:0004765!5.85e-08!22;UBERON:0001434!5.85e-08!22;UBERON:0003081!6.47e-08!88;UBERON:0004177!3.82e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,4.96e-14,3;UBERON:0002193,5.48e-14,48;UBERON:0002405,5.48e-14,48;UBERON:0002384,2.79e-10,46;UBERON:0002371,2.98e-10,16;UBERON:0001962,8.62e-10,2;UBERON:0001961,8.62e-10,2;UBERON:0001744,8.62e-10,2;UBERON:0002390,1.06e-08,45;UBERON:0003061,1.06e-08,45;UBERON:0001474,2.62e-07,22;UBERON:0004765,2.62e-07,22;UBERON:0001434,2.62e-07,22;UBERON:0002106,3.39e-07,6;UBERON:0004457,3.39e-07,6;UBERON:0000042,3.39e-07,6;UBERON:0004854,3.39e-07,6;UBERON:0009034,3.39e-07,6;UBERON:0002095,3.39e-07,6;UBERON:0004782,3.39e-07,6;UBERON:0003281,3.39e-07,6;UBERON:0009664,3.39e-07,6;UBERON:0002296,3.39e-07,6;UBERON:0005602,3.39e-07,6;UBERON:0001179,3.39e-07,6;UBERON:0006293,3.39e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,1.19840510951844,0.174840804837995,8.99396356902289,9.31386229993199,4.89693314689703,14.8267217718372,14.671244395814,11.8829102503448,0.0850432901510698,1.48936426801328,0.522399578277871,4.31979541542198,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.863424909329478,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.582961673259701,0,8.71441492069049,0,0,1.31857919903284,0.956859594047176,3.66045077130436,0.169978429993855,0.419854356970974,0.552799895217695,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0.228620419965,0.504130925684203,0.682205165178267,0.481059208201647,0.233753804363138,0,0,0,0,0.965947970160952,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0,0,0,0,1.19840510951844,0.174840804837995,8.99396356902289,9.31386229993199,4.89693314689703,14.8267217718372,14.671244395814,11.8829102503448,0.0850432901510698,1.48936426801328,0.522399578277871,4.31979541542198,1.60586496747019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0.725362142011344,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,5.17875767294343,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0.838705871541442,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.863424909329478,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0.582961673259701,0,8.71441492069049,0,0,1.31857919903284,0.956859594047176,3.66045077130436,0.169978429993855,0.419854356970974,0.552799895217695,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0.228620419965,0.504130925684203,0.682205165178267,0.481059208201647,0.233753804363138,0,0,0,0,0.965947970160952,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:114660722..114660729,- | |||
}} | }} |
Latest revision as of 19:49, 4 August 2015
Short description: | p@chr12:114660722..114660729, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660722..114660729, - |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.97e-28 | 6 |
megakaryocyte | 3.97e-28 | 6 |
megakaryocyte-erythroid progenitor cell | 1.30e-18 | 9 |
hematopoietic lineage restricted progenitor cell | 6.08e-17 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.44e-14 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.44e-14 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.44e-14 | 3 |
hematopoietic cell | 6.65e-13 | 32 |
hematopoietic oligopotent progenitor cell | 6.65e-13 | 32 |
hematopoietic stem cell | 6.65e-13 | 32 |
hematopoietic multipotent progenitor cell | 6.65e-13 | 32 |
myeloid lineage restricted progenitor cell | 9.75e-13 | 13 |
connective tissue cell | 2.79e-10 | 46 |
mesenchymal cell | 2.79e-10 | 46 |
myeloid cell | 2.98e-10 | 16 |
common myeloid progenitor | 1.51e-08 | 19 |
motile cell | 1.70e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 4.96e-14 | 3 |
hemolymphoid system | 5.48e-14 | 48 |
immune system | 5.48e-14 | 48 |
connective tissue | 2.79e-10 | 46 |
bone marrow | 2.98e-10 | 16 |
gut-associated lymphoid tissue | 8.62e-10 | 2 |
mucosa-associated lymphoid tissue | 8.62e-10 | 2 |
lymphoid tissue | 8.62e-10 | 2 |
hematopoietic system | 1.06e-08 | 45 |
blood island | 1.06e-08 | 45 |
bone element | 2.62e-07 | 22 |
skeletal element | 2.62e-07 | 22 |
skeletal system | 2.62e-07 | 22 |
spleen | 3.39e-07 | 6 |
cavity lining | 3.39e-07 | 6 |
serous membrane | 3.39e-07 | 6 |
gastrointestinal system mesentery | 3.39e-07 | 6 |
stomach region | 3.39e-07 | 6 |
mesentery | 3.39e-07 | 6 |
gastrointestinal system serosa | 3.39e-07 | 6 |
mesentery of stomach | 3.39e-07 | 6 |
gut mesentery | 3.39e-07 | 6 |
dorsal mesentery | 3.39e-07 | 6 |
dorsal mesogastrium | 3.39e-07 | 6 |
peritoneal cavity | 3.39e-07 | 6 |
spleen primordium | 3.39e-07 | 6 |