FFCP PHASE1:Mm9::chr7:25763320..25763329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:25763320..25763329,- | |||
|description=CAGE_peak_at_chr7:25763320..25763329,- | |description=CAGE_peak_at_chr7:25763320..25763329,- | ||
|id=chr7:25763320..25763329,- | |id=chr7:25763320..25763329,- | ||
|ontology_enrichment_celltype=CL:0000117!2.26e-15!23;CL:0000337!2.26e-15!23;CL:0000540!8.60e-10!33;CL:0000047!8.60e-10!33;CL:0000031!8.60e-10!33;CL:0000404!8.60e-10!33;CL:0002610!1.02e-08!3;CL:0002612!2.49e-08!3;CL:0002614!3.65e-08!3;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39;CL:0002319!7.71e-07!43 | |ontology_enrichment_celltype=CL:0000117!2.26e-15!23;CL:0000337!2.26e-15!23;CL:0000540!8.60e-10!33;CL:0000047!8.60e-10!33;CL:0000031!8.60e-10!33;CL:0000404!8.60e-10!33;CL:0002610!1.02e-08!3;CL:0002612!2.49e-08!3;CL:0002614!3.65e-08!3;CL:0000393!7.81e-08!39;CL:0000211!7.81e-08!39;CL:0002319!7.71e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.06e-27,3;CL:0000117,1.66e-18,23;CL:0000337,1.66e-18,23;CL:0000540,7.79e-13,33;CL:0000047,7.79e-13,33;CL:0000031,7.79e-13,33;CL:0000404,7.79e-13,33;CL:0002612,8.30e-13,3;CL:0002614,2.42e-12,3;CL:0000393,8.08e-11,39;CL:0000211,8.08e-11,39;CL:0002319,8.75e-10,43;CL:0000221,1.48e-09,44;CL:0000133,1.48e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.46e-20!73;UBERON:0005743!9.46e-20!73;UBERON:0000073!4.79e-19!75;UBERON:0001016!4.79e-19!75;UBERON:0001049!5.01e-19!52;UBERON:0005068!5.01e-19!52;UBERON:0006241!5.01e-19!52;UBERON:0007135!5.01e-19!52;UBERON:0003076!8.97e-19!12;UBERON:0003057!8.97e-19!12;UBERON:0004121!4.71e-17!102;UBERON:0000924!4.71e-17!102;UBERON:0006601!4.71e-17!102;UBERON:0002346!1.45e-16!71;UBERON:0003075!1.45e-16!71;UBERON:0007284!1.45e-16!71;UBERON:0000955!2.16e-16!50;UBERON:0006238!2.16e-16!50;UBERON:0002616!5.57e-15!49;UBERON:0000033!8.85e-15!63;UBERON:0002240!1.77e-14!6;UBERON:0005174!1.77e-14!6;UBERON:0001137!1.77e-14!6;UBERON:0002298!3.17e-14!6;UBERON:0002020!3.63e-14!34;UBERON:0001948!2.34e-12!5;UBERON:0002315!2.34e-12!5;UBERON:0002950!2.62e-10!4;UBERON:0001891!2.62e-10!4;UBERON:0009616!2.62e-10!4;UBERON:0007811!2.35e-09!86;UBERON:0004684!1.02e-08!3;UBERON:0002275!1.02e-08!3;UBERON:0002257!2.49e-08!3;UBERON:0002038!3.65e-08!3;UBERON:0002308!3.65e-08!3;UBERON:0009663!3.65e-08!3;UBERON:0009661!3.65e-08!3;UBERON:0006331!3.65e-08!3;UBERON:0000125!3.65e-08!3;UBERON:0000153!4.19e-08!94;UBERON:0002791!1.90e-07!29;UBERON:0003528!1.90e-07!29;UBERON:0001893!1.90e-07!29;UBERON:0003056!2.75e-07!49;UBERON:0003080!4.67e-07!40;UBERON:0002420!5.16e-07!8;UBERON:0007245!5.16e-07!8;UBERON:0010009!5.16e-07!8;UBERON:0010011!5.16e-07!8;UBERON:0000454!5.16e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!9.46e-20!73;UBERON:0005743!9.46e-20!73;UBERON:0000073!4.79e-19!75;UBERON:0001016!4.79e-19!75;UBERON:0001049!5.01e-19!52;UBERON:0005068!5.01e-19!52;UBERON:0006241!5.01e-19!52;UBERON:0007135!5.01e-19!52;UBERON:0003076!8.97e-19!12;UBERON:0003057!8.97e-19!12;UBERON:0004121!4.71e-17!102;UBERON:0000924!4.71e-17!102;UBERON:0006601!4.71e-17!102;UBERON:0002346!1.45e-16!71;UBERON:0003075!1.45e-16!71;UBERON:0007284!1.45e-16!71;UBERON:0000955!2.16e-16!50;UBERON:0006238!2.16e-16!50;UBERON:0002616!5.57e-15!49;UBERON:0000033!8.85e-15!63;UBERON:0002240!1.77e-14!6;UBERON:0005174!1.77e-14!6;UBERON:0001137!1.77e-14!6;UBERON:0002298!3.17e-14!6;UBERON:0002020!3.63e-14!34;UBERON:0001948!2.34e-12!5;UBERON:0002315!2.34e-12!5;UBERON:0002950!2.62e-10!4;UBERON:0001891!2.62e-10!4;UBERON:0009616!2.62e-10!4;UBERON:0007811!2.35e-09!86;UBERON:0004684!1.02e-08!3;UBERON:0002275!1.02e-08!3;UBERON:0002257!2.49e-08!3;UBERON:0002038!3.65e-08!3;UBERON:0002308!3.65e-08!3;UBERON:0009663!3.65e-08!3;UBERON:0009661!3.65e-08!3;UBERON:0006331!3.65e-08!3;UBERON:0000125!3.65e-08!3;UBERON:0000153!4.19e-08!94;UBERON:0002791!1.90e-07!29;UBERON:0003528!1.90e-07!29;UBERON:0001893!1.90e-07!29;UBERON:0003056!2.75e-07!49;UBERON:0003080!4.67e-07!40;UBERON:0002420!5.16e-07!8;UBERON:0007245!5.16e-07!8;UBERON:0010009!5.16e-07!8;UBERON:0010011!5.16e-07!8;UBERON:0000454!5.16e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.06e-27,3;UBERON:0002275,2.06e-27,3;UBERON:0000073,8.19e-16,54;UBERON:0002257,8.30e-13,3;UBERON:0002038,2.42e-12,3;UBERON:0009663,2.42e-12,3;UBERON:0009661,2.42e-12,3;UBERON:0000125,2.42e-12,3;UBERON:0002308,2.42e-12,3;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002950,1.71e-09,4;UBERON:0001891,1.71e-09,4;UBERON:0009616,1.71e-09,4;UBERON:0010286,1.71e-09,4;UBERON:0002020,4.58e-09,34;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001948,4.72e-08,5;UBERON:0002315,4.72e-08,5;UBERON:0001049,5.95e-08,52;UBERON:0005068,5.95e-08,52;UBERON:0006241,5.95e-08,52;UBERON:0007135,5.95e-08,52;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12;UBERON:0002240,7.48e-07,6;UBERON:0005174,7.48e-07,6;UBERON:0001137,7.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,2.20231761998777,1.53224805702225,1.68967186581868,0,0.182975287204819,0,1.11673199600552,0.56276261003168,1.06958773443767,1.47314292736834,1.99320353118744,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,8.79676168616511,0,0,0,0,0.748953197024114,0,0.125654352112864,0.347648640384553,0,0.62336413367868,0,0,0,0,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,1.03111909406213,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,2.20231761998777,1.53224805702225,1.68967186581868,0,0.182975287204819,0,1.11673199600552,0.56276261003168,1.06958773443767,1.47314292736834,1.99320353118744,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,8.79676168616511,0,0,0,0,0.748953197024114,0,0.125654352112864,0.347648640384553,0,0.62336413367868,0,0,0,0,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,1.03111909406213,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr7:25763320..25763329,- | |short_description=p@chr7:25763320..25763329,- | ||
}} | }} |
Latest revision as of 19:48, 4 August 2015
Short description: | p@chr7:25763320..25763329, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25763320..25763329, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.06e-27 | 3 |
CNS neuron (sensu Vertebrata) | 1.66e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-18 | 23 |
neuron | 7.79e-13 | 33 |
neuronal stem cell | 7.79e-13 | 33 |
neuroblast | 7.79e-13 | 33 |
electrically signaling cell | 7.79e-13 | 33 |
neuron of the ventral spinal cord | 8.30e-13 | 3 |
neuron of the substantia nigra | 2.42e-12 | 3 |
electrically responsive cell | 8.08e-11 | 39 |
electrically active cell | 8.08e-11 | 39 |
neural cell | 8.75e-10 | 43 |
ectodermal cell | 1.48e-09 | 44 |
neurectodermal cell | 1.48e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.06e-27 | 3 |
reticular formation | 2.06e-27 | 3 |
regional part of nervous system | 8.19e-16 | 54 |
ventral horn of spinal cord | 8.30e-13 | 3 |
substantia nigra | 2.42e-12 | 3 |
telencephalic nucleus | 2.42e-12 | 3 |
midbrain nucleus | 2.42e-12 | 3 |
neural nucleus | 2.42e-12 | 3 |
nucleus of brain | 2.42e-12 | 3 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
regional part of midbrain | 1.71e-09 | 4 |
midbrain | 1.71e-09 | 4 |
presumptive midbrain | 1.71e-09 | 4 |
midbrain neural tube | 1.71e-09 | 4 |
gray matter | 4.58e-09 | 34 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
regional part of spinal cord | 4.72e-08 | 5 |
gray matter of spinal cord | 4.72e-08 | 5 |
neural tube | 5.95e-08 | 52 |
neural rod | 5.95e-08 | 52 |
future spinal cord | 5.95e-08 | 52 |
neural keel | 5.95e-08 | 52 |
posterior neural tube | 2.36e-07 | 12 |
chordal neural plate | 2.36e-07 | 12 |
spinal cord | 7.48e-07 | 6 |
dorsal region element | 7.48e-07 | 6 |
dorsum | 7.48e-07 | 6 |