FFCP PHASE1:Mm9::chr12:114659852..114659872,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |MCL_coexpression_id=48 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114659852..114659872,+ | |||
|description=CAGE_peak_at_chr12:114659852..114659872,+ | |description=CAGE_peak_at_chr12:114659852..114659872,+ | ||
|id=chr12:114659852..114659872,+ | |id=chr12:114659852..114659872,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.91e-10!6;CL:0000556!1.91e-10!6;CL:0002031!2.02e-09!25;CL:0000988!6.20e-09!32;CL:0002032!6.20e-09!32;CL:0000037!6.20e-09!32;CL:0000566!6.20e-09!32;CL:0000837!6.20e-09!32;CL:0000838!7.29e-07!12;CL:0000414!7.52e-07!11 | |ontology_enrichment_celltype=CL:0000553!1.91e-10!6;CL:0000556!1.91e-10!6;CL:0002031!2.02e-09!25;CL:0000988!6.20e-09!32;CL:0002032!6.20e-09!32;CL:0000037!6.20e-09!32;CL:0000566!6.20e-09!32;CL:0000837!6.20e-09!32;CL:0000838!7.29e-07!12;CL:0000414!7.52e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.02e-40,6;CL:0000556,1.02e-40,6;CL:0000050,4.01e-27,9;CL:0002027,7.30e-21,3;CL:0002006,7.30e-21,3;CL:0002024,7.30e-21,3;CL:0000839,9.84e-19,13;CL:0002031,7.15e-17,25;CL:0000763,3.49e-15,16;CL:0000988,4.87e-13,32;CL:0002032,4.87e-13,32;CL:0000037,4.87e-13,32;CL:0000837,4.87e-13,32;CL:0000049,9.49e-13,19;CL:0002320,7.46e-09,46;CL:0000134,7.46e-09,46;CL:0000945,1.56e-08,1;CL:0000236,1.56e-08,1;CL:0000826,1.56e-08,1;CL:0000219,1.98e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.67e-14!48;UBERON:0002390!1.22e-11!45;UBERON:0003061!1.22e-11!45;UBERON:0002405!1.98e-11!70;UBERON:0004177!1.61e-08!29;UBERON:0006562!7.22e-08!24;UBERON:0001557!7.22e-08!24;UBERON:0001042!7.22e-08!24;UBERON:0008814!7.22e-08!24;UBERON:0009145!7.22e-08!24;UBERON:0002370!3.89e-07!23;UBERON:0000974!3.89e-07!23;UBERON:0004807!3.89e-07!23;UBERON:0005058!3.89e-07!23;UBERON:0003351!3.89e-07!23;UBERON:0009113!3.89e-07!23;UBERON:0003295!3.89e-07!23;UBERON:0009722!3.89e-07!23;UBERON:0005562!3.89e-07!23;UBERON:0007690!3.89e-07!23;UBERON:0000065!4.85e-07!41;UBERON:0003081!7.09e-07!88;UBERON:0001004!9.15e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!1.67e-14!48;UBERON:0002390!1.22e-11!45;UBERON:0003061!1.22e-11!45;UBERON:0002405!1.98e-11!70;UBERON:0004177!1.61e-08!29;UBERON:0006562!7.22e-08!24;UBERON:0001557!7.22e-08!24;UBERON:0001042!7.22e-08!24;UBERON:0008814!7.22e-08!24;UBERON:0009145!7.22e-08!24;UBERON:0002370!3.89e-07!23;UBERON:0000974!3.89e-07!23;UBERON:0004807!3.89e-07!23;UBERON:0005058!3.89e-07!23;UBERON:0003351!3.89e-07!23;UBERON:0009113!3.89e-07!23;UBERON:0003295!3.89e-07!23;UBERON:0009722!3.89e-07!23;UBERON:0005562!3.89e-07!23;UBERON:0007690!3.89e-07!23;UBERON:0000065!4.85e-07!41;UBERON:0003081!7.09e-07!88;UBERON:0001004!9.15e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-15,16;UBERON:0001962,1.23e-14,2;UBERON:0001961,1.23e-14,2;UBERON:0001744,1.23e-14,2;UBERON:0001474,5.65e-11,22;UBERON:0004765,5.65e-11,22;UBERON:0001434,5.65e-11,22;UBERON:0002193,9.61e-11,48;UBERON:0002405,9.61e-11,48;UBERON:0002465,4.52e-10,3;UBERON:0002384,7.46e-09,46;UBERON:0003199,4.10e-08,1;UBERON:0002204,1.90e-07,32;UBERON:0002390,5.58e-07,45;UBERON:0003061,5.58e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0,0,0,0.513602189793617,0.262261207256992,3.99731714178795,7.89653542820321,1.39912375625629,9.46386496074713,11.9289557236993,3.81950686618227,0.425216450755349,0.893618560807968,1.04479915655574,4.47978783821539,4.35877634027623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7983475148129,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.883366073841574,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0.936113019343682,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,6.66396435111626,0,0,0,0.27338845544205,0.915112692826091,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0.295379054349154,0.504832249740738,0.0762068066549998,0.403304740547362,0.292373642219257,0.384847366561318,0.818138315270983,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0,0,0,0.513602189793617,0.262261207256992,3.99731714178795,7.89653542820321,1.39912375625629,9.46386496074713,11.9289557236993,3.81950686618227,0.425216450755349,0.893618560807968,1.04479915655574,4.47978783821539,4.35877634027623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7983475148129,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.883366073841574,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0.936113019343682,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0.983528546038072,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,6.66396435111626,0,0,0,0.27338845544205,0.915112692826091,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0.295379054349154,0.504832249740738,0.0762068066549998,0.403304740547362,0.292373642219257,0.384847366561318,0.818138315270983,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:114659852..114659872,+ | |short_description=p@chr12:114659852..114659872,+ | ||
}} | }} |
Latest revision as of 19:47, 4 August 2015
Short description: | p@chr12:114659852..114659872, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114659852..114659872, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.02e-40 | 6 |
megakaryocyte | 1.02e-40 | 6 |
megakaryocyte-erythroid progenitor cell | 4.01e-27 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.30e-21 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.30e-21 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.30e-21 | 3 |
myeloid lineage restricted progenitor cell | 9.84e-19 | 13 |
hematopoietic lineage restricted progenitor cell | 7.15e-17 | 25 |
myeloid cell | 3.49e-15 | 16 |
hematopoietic cell | 4.87e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.87e-13 | 32 |
hematopoietic stem cell | 4.87e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.87e-13 | 32 |
common myeloid progenitor | 9.49e-13 | 19 |
connective tissue cell | 7.46e-09 | 46 |
mesenchymal cell | 7.46e-09 | 46 |
lymphocyte of B lineage | 1.56e-08 | 1 |
B cell | 1.56e-08 | 1 |
pro-B cell | 1.56e-08 | 1 |
motile cell | 1.98e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.49e-15 | 16 |
gut-associated lymphoid tissue | 1.23e-14 | 2 |
mucosa-associated lymphoid tissue | 1.23e-14 | 2 |
lymphoid tissue | 1.23e-14 | 2 |
bone element | 5.65e-11 | 22 |
skeletal element | 5.65e-11 | 22 |
skeletal system | 5.65e-11 | 22 |
hemolymphoid system | 9.61e-11 | 48 |
immune system | 9.61e-11 | 48 |
lymphoid system | 4.52e-10 | 3 |
connective tissue | 7.46e-09 | 46 |
egg chamber | 4.10e-08 | 1 |
musculoskeletal system | 1.90e-07 | 32 |
hematopoietic system | 5.58e-07 | 45 |
blood island | 5.58e-07 | 45 |