FFCP PHASE1:Mm9::chr12:114659370..114659385,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=372 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-150bp_to_uc007pgs.1_5end | |association_with_transcript=-150bp_to_uc007pgs.1_5end | ||
|cluster_id=chr12:114659370..114659385,- | |||
|description=CAGE_peak_6_at_uc007pgs.1_5end | |description=CAGE_peak_6_at_uc007pgs.1_5end | ||
|id=chr12:114659370..114659385,- | |id=chr12:114659370..114659385,- | ||
|ontology_enrichment_celltype=CL:0000553!5.49e-08!6;CL:0000556!5.49e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.27e-34,6;CL:0000556,9.27e-34,6;CL:0000050,9.80e-23,9;CL:0002027,2.33e-17,3;CL:0002006,2.33e-17,3;CL:0002024,2.33e-17,3;CL:0000839,6.33e-16,13;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000763,4.86e-13,16;CL:0002031,8.60e-13,25;CL:0000049,4.64e-11,19;CL:0000988,4.61e-10,32;CL:0002032,4.61e-10,32;CL:0000037,4.61e-10,32;CL:0000837,4.61e-10,32;CL:0002320,4.50e-07,46;CL:0000134,4.50e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.58e-15!48;UBERON:0002390!4.95e-11!45;UBERON:0003061!4.95e-11!45;UBERON:0002405!2.46e-10!70;UBERON:0004177!9.97e-10!29;UBERON:0003081!2.99e-09!88;UBERON:0002465!4.27e-09!3;UBERON:0002106!2.32e-07!6;UBERON:0004457!2.32e-07!6;UBERON:0000042!2.32e-07!6;UBERON:0004854!2.32e-07!6;UBERON:0009034!2.32e-07!6;UBERON:0002095!2.32e-07!6;UBERON:0004782!2.32e-07!6;UBERON:0003281!2.32e-07!6;UBERON:0009664!2.32e-07!6;UBERON:0002296!2.32e-07!6;UBERON:0005602!2.32e-07!6;UBERON:0001179!2.32e-07!6;UBERON:0006293!2.32e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.69e-14,1;UBERON:0001097,8.69e-14,1;UBERON:0003968,8.69e-14,1;UBERON:0001467,8.69e-14,1;UBERON:0002371,4.86e-13,16;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0001474,1.29e-09,22;UBERON:0004765,1.29e-09,22;UBERON:0001434,1.29e-09,22;UBERON:0002390,2.79e-07,45;UBERON:0003061,2.79e-07,45;UBERON:0002384,4.50e-07,46;UBERON:0002204,9.80e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.61980213911861,0,2.83915948822414,2.74228867211478,0,0,0.297872853602656,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.61980213911861,0,2.83915948822414,2.74228867211478,0,0,0.297872853602656,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@uc007pgs.1 | |short_description=p6@uc007pgs.1 | ||
}} | }} |
Latest revision as of 19:45, 4 August 2015
Short description: | p6@uc007pgs.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_uc007pgs.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | -150bp_to_uc007pgs.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.27e-34 | 6 |
megakaryocyte | 9.27e-34 | 6 |
megakaryocyte-erythroid progenitor cell | 9.80e-23 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.33e-17 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.33e-17 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.33e-17 | 3 |
myeloid lineage restricted progenitor cell | 6.33e-16 | 13 |
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
myeloid cell | 4.86e-13 | 16 |
hematopoietic lineage restricted progenitor cell | 8.60e-13 | 25 |
common myeloid progenitor | 4.64e-11 | 19 |
hematopoietic cell | 4.61e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.61e-10 | 32 |
hematopoietic stem cell | 4.61e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.61e-10 | 32 |
connective tissue cell | 4.50e-07 | 46 |
mesenchymal cell | 4.50e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.69e-14 | 1 |
axillary lymph node | 8.69e-14 | 1 |
peripheral lymph node | 8.69e-14 | 1 |
shoulder | 8.69e-14 | 1 |
bone marrow | 4.86e-13 | 16 |
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
bone element | 1.29e-09 | 22 |
skeletal element | 1.29e-09 | 22 |
skeletal system | 1.29e-09 | 22 |
hematopoietic system | 2.79e-07 | 45 |
blood island | 2.79e-07 | 45 |
connective tissue | 4.50e-07 | 46 |
musculoskeletal system | 9.80e-07 | 32 |