FFCP PHASE1:Mm9::chr10:79771024..79771028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79771024..79771028,+ | |||
|description=CAGE_peak_at_chr10:79771024..79771028,+ | |description=CAGE_peak_at_chr10:79771024..79771028,+ | ||
|id=chr10:79771024..79771028,+ | |id=chr10:79771024..79771028,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.11e-21!23;CL:0000337!1.11e-21!23;CL:0000540!2.22e-19!33;CL:0000047!2.22e-19!33;CL:0000031!2.22e-19!33;CL:0000404!2.22e-19!33;CL:0002319!1.99e-18!43;CL:0000221!8.41e-18!44;CL:0000133!8.41e-18!44;CL:0000393!9.40e-17!39;CL:0000211!9.40e-17!39;CL:0000055!5.66e-16!50;CL:0002609!1.89e-09!6;CL:0002321!6.70e-09!70;CL:0000220!6.70e-09!70 | |ontology_enrichment_celltype=CL:0000117!1.11e-21!23;CL:0000337!1.11e-21!23;CL:0000540!2.22e-19!33;CL:0000047!2.22e-19!33;CL:0000031!2.22e-19!33;CL:0000404!2.22e-19!33;CL:0002319!1.99e-18!43;CL:0000221!8.41e-18!44;CL:0000133!8.41e-18!44;CL:0000393!9.40e-17!39;CL:0000211!9.40e-17!39;CL:0000055!5.66e-16!50;CL:0002609!1.89e-09!6;CL:0002321!6.70e-09!70;CL:0000220!6.70e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-34,23;CL:0000337,6.12e-34,23;CL:0002609,3.59e-26,6;CL:0000540,1.23e-23,33;CL:0000047,1.23e-23,33;CL:0000031,1.23e-23,33;CL:0000404,1.23e-23,33;CL:0000393,5.55e-20,39;CL:0000211,5.55e-20,39;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000120,3.14e-14,3;CL:0002613,4.25e-14,3;CL:0002608,1.20e-13,3;CL:0002321,4.95e-11,70;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.34e-28!73;UBERON:0005743!3.34e-28!73;UBERON:0000073!4.55e-27!75;UBERON:0001016!4.55e-27!75;UBERON:0002616!2.28e-25!49;UBERON:0001049!3.93e-25!52;UBERON:0005068!3.93e-25!52;UBERON:0006241!3.93e-25!52;UBERON:0007135!3.93e-25!52;UBERON:0000955!1.24e-24!50;UBERON:0006238!1.24e-24!50;UBERON:0002346!1.80e-22!71;UBERON:0003075!1.80e-22!71;UBERON:0007284!1.80e-22!71;UBERON:0000033!3.00e-22!63;UBERON:0004121!3.35e-20!102;UBERON:0000924!3.35e-20!102;UBERON:0006601!3.35e-20!102;UBERON:0003056!3.45e-17!49;UBERON:0003080!4.13e-17!40;UBERON:0002020!1.60e-16!34;UBERON:0002780!4.43e-16!39;UBERON:0001890!4.43e-16!39;UBERON:0006240!4.43e-16!39;UBERON:0002791!7.42e-15!29;UBERON:0003528!7.42e-15!29;UBERON:0001893!7.42e-15!29;UBERON:0007811!3.86e-13!86;UBERON:0000153!1.08e-12!94;UBERON:0000025!3.06e-09!114;UBERON:0003076!9.50e-09!12;UBERON:0003057!9.50e-09!12;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002420!3.37e-08!8;UBERON:0007245!3.37e-08!8;UBERON:0010009!3.37e-08!8;UBERON:0010011!3.37e-08!8;UBERON:0000454!3.37e-08!8;UBERON:0004111!6.72e-08!122;UBERON:0002298!2.65e-07!6;UBERON:0001954!7.64e-07!7;UBERON:0003022!7.64e-07!7;UBERON:0002421!7.64e-07!7;UBERON:0000349!7.64e-07!7;UBERON:0002600!7.64e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!3.34e-28!73;UBERON:0005743!3.34e-28!73;UBERON:0000073!4.55e-27!75;UBERON:0001016!4.55e-27!75;UBERON:0002616!2.28e-25!49;UBERON:0001049!3.93e-25!52;UBERON:0005068!3.93e-25!52;UBERON:0006241!3.93e-25!52;UBERON:0007135!3.93e-25!52;UBERON:0000955!1.24e-24!50;UBERON:0006238!1.24e-24!50;UBERON:0002346!1.80e-22!71;UBERON:0003075!1.80e-22!71;UBERON:0007284!1.80e-22!71;UBERON:0000033!3.00e-22!63;UBERON:0004121!3.35e-20!102;UBERON:0000924!3.35e-20!102;UBERON:0006601!3.35e-20!102;UBERON:0003056!3.45e-17!49;UBERON:0003080!4.13e-17!40;UBERON:0002020!1.60e-16!34;UBERON:0002780!4.43e-16!39;UBERON:0001890!4.43e-16!39;UBERON:0006240!4.43e-16!39;UBERON:0002791!7.42e-15!29;UBERON:0003528!7.42e-15!29;UBERON:0001893!7.42e-15!29;UBERON:0007811!3.86e-13!86;UBERON:0000153!1.08e-12!94;UBERON:0000025!3.06e-09!114;UBERON:0003076!9.50e-09!12;UBERON:0003057!9.50e-09!12;UBERON:0000956!1.47e-08!21;UBERON:0001869!1.47e-08!21;UBERON:0000203!1.47e-08!21;UBERON:0002420!3.37e-08!8;UBERON:0007245!3.37e-08!8;UBERON:0010009!3.37e-08!8;UBERON:0010011!3.37e-08!8;UBERON:0000454!3.37e-08!8;UBERON:0004111!6.72e-08!122;UBERON:0002298!2.65e-07!6;UBERON:0001954!7.64e-07!7;UBERON:0003022!7.64e-07!7;UBERON:0002421!7.64e-07!7;UBERON:0000349!7.64e-07!7;UBERON:0002600!7.64e-07!7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.25e-12,29;UBERON:0002791,4.25e-12,29;UBERON:0001893,4.25e-12,29;UBERON:0001017,1.45e-10,73;UBERON:0002020,2.58e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0002780,5.53e-09,39;UBERON:0001890,5.53e-09,39;UBERON:0006240,5.53e-09,39;UBERON:0000369,7.70e-09,5;UBERON:0002435,7.70e-09,5;UBERON:0000204,7.70e-09,5;UBERON:0010082,7.70e-09,5;UBERON:0003080,9.33e-09,40;UBERON:0000073,1.21e-08,54;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0000956,9.04e-08,21;UBERON:0001869,9.04e-08,21;UBERON:0000203,9.04e-08,21;UBERON:0002616,1.34e-07,46;UBERON:0000955,1.95e-07,47;UBERON:0006238,1.95e-07,47;UBERON:0003056,3.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.61853168687678,2.11596391708813,0,0.338844532069132,0,0,0,0,0,0,0.622137673850866,2.70011876663381,1.26194976810829,0,0.662605622854841,1.10241719293459,1.15014565221884,0.919218786610021,1.10115880999389,0.638436690425939,0.153606533256243,1.45074916503213,2.01272815925301,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0,0.502617408451458,0.173824320192276,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.823236899034275,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,1.61853168687678,2.11596391708813,0,0.338844532069132,0,0,0,0,0,0,0.622137673850866,2.70011876663381,1.26194976810829,0,0.662605622854841,1.10241719293459,1.15014565221884,0.919218786610021,1.10115880999389,0.638436690425939,0.153606533256243,1.45074916503213,2.01272815925301,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,0.589257170947335,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0,0.502617408451458,0.173824320192276,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.823236899034275,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0.341467211508268,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr10:79771024..79771028,+ | |short_description=p@chr10:79771024..79771028,+ | ||
}} | }} |
Latest revision as of 19:41, 4 August 2015
Short description: | p@chr10:79771024..79771028, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79771024..79771028, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-34 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-34 | 23 |
neuron of cerebral cortex | 3.59e-26 | 6 |
neuron | 1.23e-23 | 33 |
neuronal stem cell | 1.23e-23 | 33 |
neuroblast | 1.23e-23 | 33 |
electrically signaling cell | 1.23e-23 | 33 |
electrically responsive cell | 5.55e-20 | 39 |
electrically active cell | 5.55e-20 | 39 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
granule cell | 3.14e-14 | 3 |
striatum neuron | 4.25e-14 | 3 |
hippocampal neuron | 1.20e-13 | 3 |
embryonic cell | 4.95e-11 | 70 |
somatic stem cell | 2.09e-08 | 91 |
multi fate stem cell | 2.09e-08 | 91 |
stem cell | 7.32e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 4.25e-12 | 29 |
regional part of telencephalon | 4.25e-12 | 29 |
telencephalon | 4.25e-12 | 29 |
central nervous system | 1.45e-10 | 73 |
gray matter | 2.58e-10 | 34 |
nervous system | 2.82e-10 | 75 |
regional part of forebrain | 5.53e-09 | 39 |
forebrain | 5.53e-09 | 39 |
future forebrain | 5.53e-09 | 39 |
corpus striatum | 7.70e-09 | 5 |
striatum | 7.70e-09 | 5 |
ventral part of telencephalon | 7.70e-09 | 5 |
future corpus striatum | 7.70e-09 | 5 |
anterior neural tube | 9.33e-09 | 40 |
regional part of nervous system | 1.21e-08 | 54 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
cerebral cortex | 9.04e-08 | 21 |
cerebral hemisphere | 9.04e-08 | 21 |
pallium | 9.04e-08 | 21 |
regional part of brain | 1.34e-07 | 46 |
brain | 1.95e-07 | 47 |
future brain | 1.95e-07 | 47 |
pre-chordal neural plate | 3.97e-07 | 49 |