FFCP PHASE1:Mm9::chr7:25677212..25677252,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=553 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:25677212..25677252,- | |||
|description=CAGE_peak_at_chr7:25677212..25677252,- | |description=CAGE_peak_at_chr7:25677212..25677252,- | ||
|id=chr7:25677212..25677252,- | |id=chr7:25677212..25677252,- | ||
|ontology_enrichment_celltype=CL:0000553!1.01e-09!6;CL:0000556!1.01e-09!6;CL:0002031!3.49e-09!25;CL:0000414!4.50e-07!11 | |ontology_enrichment_celltype=CL:0000553!1.01e-09!6;CL:0000556!1.01e-09!6;CL:0002031!3.49e-09!25;CL:0000414!4.50e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.35e-11,8;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000791,2.23e-10,9;CL:0000789,2.23e-10,9;CL:0002420,2.23e-10,9;CL:0002419,2.23e-10,9;CL:0000790,2.23e-10,9;CL:0002031,5.89e-10,25;CL:0000084,1.33e-08,11;CL:0000827,1.33e-08,11;CL:0000838,6.19e-08,12;CL:0000988,8.44e-08,32;CL:0002032,8.44e-08,32;CL:0000037,8.44e-08,32;CL:0000837,8.44e-08,32;CL:0000553,1.51e-07,6;CL:0000556,1.51e-07,6;CL:0000542,2.28e-07,13;CL:0000051,2.28e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.90e-13!48;UBERON:0002390!7.18e-10!45;UBERON:0003061!7.18e-10!45;UBERON:0000065!8.94e-10!41;UBERON:0001004!1.87e-09!42;UBERON:0002048!4.75e-09!14;UBERON:0000117!4.75e-09!14;UBERON:0000171!4.75e-09!14;UBERON:0000170!4.75e-09!14;UBERON:0005597!4.75e-09!14;UBERON:0000118!4.75e-09!14;UBERON:0002405!1.23e-08!70;UBERON:0004177!8.38e-08!29;UBERON:0005153!3.38e-07!17;UBERON:0005178!3.38e-07!17;UBERON:0005181!3.38e-07!17;UBERON:0002224!3.38e-07!17;UBERON:0000915!3.38e-07!17;UBERON:0008947!3.38e-07!17;UBERON:0003258!3.38e-07!17;UBERON:0002465!3.57e-07!3;UBERON:0003887!5.28e-07!10 | |ontology_enrichment_uberon=UBERON:0002193!2.90e-13!48;UBERON:0002390!7.18e-10!45;UBERON:0003061!7.18e-10!45;UBERON:0000065!8.94e-10!41;UBERON:0001004!1.87e-09!42;UBERON:0002048!4.75e-09!14;UBERON:0000117!4.75e-09!14;UBERON:0000171!4.75e-09!14;UBERON:0000170!4.75e-09!14;UBERON:0005597!4.75e-09!14;UBERON:0000118!4.75e-09!14;UBERON:0002405!1.23e-08!70;UBERON:0004177!8.38e-08!29;UBERON:0005153!3.38e-07!17;UBERON:0005178!3.38e-07!17;UBERON:0005181!3.38e-07!17;UBERON:0002224!3.38e-07!17;UBERON:0000915!3.38e-07!17;UBERON:0008947!3.38e-07!17;UBERON:0003258!3.38e-07!17;UBERON:0002465!3.57e-07!3;UBERON:0003887!5.28e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.19e-11,1;UBERON:0001097,7.19e-11,1;UBERON:0003968,7.19e-11,1;UBERON:0001467,7.19e-11,1;UBERON:0002048,6.69e-07,14;UBERON:0000117,6.69e-07,14;UBERON:0000171,6.69e-07,14;UBERON:0000170,6.69e-07,14;UBERON:0005597,6.69e-07,14;UBERON:0000118,6.69e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0,0,0,0,1.19840510951844,0.262261207256992,0.333109761815663,0.404950534779652,0,2.68142840554502,3.01651753932625,0.84877930359606,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.478364305972461,1.47476983244164,0.345369963731791,3.03763023021174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0.577271049841977,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0,0,0,0,1.19840510951844,0.262261207256992,0.333109761815663,0.404950534779652,0,2.68142840554502,3.01651753932625,0.84877930359606,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0.478364305972461,1.47476983244164,0.345369963731791,3.03763023021174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0.577271049841977,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr7:25677212..25677252,- | |short_description=p@chr7:25677212..25677252,- | ||
}} | }} |
Latest revision as of 19:38, 4 August 2015
Short description: | p@chr7:25677212..25677252, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25677212..25677252, - |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.35e-11 | 8 |
regulatory T cell | 1.83e-11 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.83e-11 | 1 |
mature alpha-beta T cell | 2.23e-10 | 9 |
alpha-beta T cell | 2.23e-10 | 9 |
immature T cell | 2.23e-10 | 9 |
mature T cell | 2.23e-10 | 9 |
immature alpha-beta T cell | 2.23e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 5.89e-10 | 25 |
T cell | 1.33e-08 | 11 |
pro-T cell | 1.33e-08 | 11 |
lymphoid lineage restricted progenitor cell | 6.19e-08 | 12 |
hematopoietic cell | 8.44e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.44e-08 | 32 |
hematopoietic stem cell | 8.44e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.44e-08 | 32 |
megakaryocyte progenitor cell | 1.51e-07 | 6 |
megakaryocyte | 1.51e-07 | 6 |
lymphocyte | 2.28e-07 | 13 |
common lymphoid progenitor | 2.28e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.19e-11 | 1 |
axillary lymph node | 7.19e-11 | 1 |
peripheral lymph node | 7.19e-11 | 1 |
shoulder | 7.19e-11 | 1 |
lung | 6.69e-07 | 14 |
respiratory tube | 6.69e-07 | 14 |
respiration organ | 6.69e-07 | 14 |
pair of lungs | 6.69e-07 | 14 |
lung primordium | 6.69e-07 | 14 |
lung bud | 6.69e-07 | 14 |