FFCP PHASE1:Mm9::chr12:114040857..114040876,-: Difference between revisions
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{{FFCP|EntrezGene=100041194|HGNC=|MCL_coexpression_id=218|UniProt=E9PYB0,Q3UUE0|association_with_transcript=0bp_to_ENSMUST00000124526,uc007pff.1_5end|description=CAGE_peak_1_at_Ahnak2_5end|id=chr12:114040857..114040876,-|ontology_enrichment_celltype=CL:0000055!1.30e-13!50;CL:0000221!1.84e-11!44;CL:0000133!1.84e-11!44;CL:0002319!2.87e-11!43;CL:0000393!4.32e-09!39;CL:0000211!4.32e-09!39;CL:0002321!8.32e-08!70;CL:0000220!8.32e-08!70;CL:0000333!7.71e-07!10;CL:0000095!7.71e-07!10;CL:0000243!7.71e-07!10;CL:0000123!7.71e-07!10;CL:0000125!7.71e-07!10;CL:0000030!7.71e-07!10;CL:0000339!7.71e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,3.10e-15,10;CL:0000095,3.10e-15,10;CL:0000243,3.10e-15,10;CL:0000123,3.10e-15,10;CL:0000125,3.10e-15,10;CL:0000030,3.10e-15,10;CL:0000339,3.10e-15,10;CL:0002319,1.07e-13,43;CL:0000221,2.89e-13,44;CL:0000133,2.89e-13,44;CL:0000128,6.73e-12,6;CL:0000126,6.73e-12,6;CL:0000127,6.73e-12,6;CL:0002453,1.61e-11,8;CL:0002321,3.91e-11,70;CL:0000393,1.45e-08,39;CL:0000211,1.45e-08,39;CL:0000680,5.80e-07,6;CL:0000187,5.80e-07,6;CL:0000056,5.80e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.34e-11!102;UBERON:0000924!4.34e-11!102;UBERON:0006601!4.34e-11!102;UBERON:0000073!7.01e-10!75;UBERON:0001016!7.01e-10!75;UBERON:0001017!8.56e-09!73;UBERON:0005743!8.56e-09!73;UBERON:0003076!9.33e-08!12;UBERON:0003057!9.33e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0003076,5.95e-16,12;UBERON:0003057,5.95e-16,12;UBERON:0001016,2.80e-14,75;UBERON:0004121,1.30e-12,95;UBERON:0000924,1.30e-12,95;UBERON:0006601,1.30e-12,95;UBERON:0002240,2.22e-12,6;UBERON:0005174,2.22e-12,6;UBERON:0001137,2.22e-12,6;UBERON:0001017,3.80e-12,73;UBERON:0001948,2.39e-10,5;UBERON:0002315,2.39e-10,5;UBERON:0000073,4.26e-09,54;UBERON:0002346,9.62e-09,64;UBERON:0003075,9.62e-09,64;UBERON:0007284,9.62e-09,64;UBERON:0001049,1.43e-08,52;UBERON:0005068,1.43e-08,52;UBERON:0006241,1.43e-08,52;UBERON:0007135,1.43e-08,52;UBERON:0010371,4.95e-07,73|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.92616169317078,1.65192076945513,6.25913075478431,1.30815093828268,16.6961498878199,6.80504646759992,2.65974201088189,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,1.03134418455488,0.202316460859598,0,0,1.35537812827653,2.66788438833342,0.899899717281399,0,0.7104801149461,0,1.53687322128622,0.103689612308478,0,0,5.71301968807607,4.41737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.893811366596314,2.4577045320999,0.131886287730194,0.0914876436024097,0,5.02529398202486,0,0.45839474333043,2.94628585473668,2.70506193518296,1.67759501242771,4.7707501799906,6.34801104896998,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0.209446706813455,0,1.55759661857696,0.599902730993408,0.508280908292259,0.599162557619291,0.457500602818626,0.125654352112864,0,0,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0,1.05220927943237,0,0.229902104433473,0.360124259610698,0.30140963567143,0.272145996605311,0.2562274405697,1.12442069471675,2.06962696591213,0,0,0,0,0.556094498451196,0,0.61734640922383,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,0,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,1.63171705145613,0,0,15.2523060488402,15.1203075703942,0,0,0.94652465824877,0.780877488593277,0.430846795465598,0.477937595905104,1.33679204449436,1.41538265394416,0.404810701674894,1.16902343164525,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,3.0322698992352,2.96188237083818,3.34911444026059,0,0,0.220528398054962,0.98931751764888,0.322928853391811,0.844380948994182,0,0.328281799490123,0,39.1247387242175,0,0.206386867963223,0,0,0,0,1.01987057996313,0.419854356970974,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0.524296722128554,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0.386379188064381,0.187682475451182,0,0.428736758158132,0,0,1.38097570952153,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,1.13175804831646,0.468207537349412,0.704276676453562,0.516919220600519,0.476293691283074,0.579421629724277,0.964546102318525,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.376437521661322,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,0,1.30498519936592,1.77308068276014,0,0.77468420592983,0.578719832943424,2.74791635731741,1.16965804222704,0.644613162144895,0.57386499620653,1.54413993383661,2.08681052058379|short_description=p1@Ahnak2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100041194 | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PYB0,uniprot:Q3UUE0 | |||
|association_with_transcript=0bp_to_ENSMUST00000124526,uc007pff.1_5end | |||
|cluster_id=chr12:114040857..114040876,- | |||
|description=CAGE_peak_1_at_Ahnak2_5end | |||
|id=chr12:114040857..114040876,- | |||
|ontology_enrichment_celltype=CL:0000055!1.30e-13!50;CL:0000221!1.84e-11!44;CL:0000133!1.84e-11!44;CL:0002319!2.87e-11!43;CL:0000393!4.32e-09!39;CL:0000211!4.32e-09!39;CL:0002321!8.32e-08!70;CL:0000220!8.32e-08!70;CL:0000333!7.71e-07!10;CL:0000095!7.71e-07!10;CL:0000243!7.71e-07!10;CL:0000123!7.71e-07!10;CL:0000125!7.71e-07!10;CL:0000030!7.71e-07!10;CL:0000339!7.71e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.10e-15,10;CL:0000095,3.10e-15,10;CL:0000243,3.10e-15,10;CL:0000123,3.10e-15,10;CL:0000125,3.10e-15,10;CL:0000030,3.10e-15,10;CL:0000339,3.10e-15,10;CL:0002319,1.07e-13,43;CL:0000221,2.89e-13,44;CL:0000133,2.89e-13,44;CL:0000128,6.73e-12,6;CL:0000126,6.73e-12,6;CL:0000127,6.73e-12,6;CL:0002453,1.61e-11,8;CL:0002321,3.91e-11,70;CL:0000393,1.45e-08,39;CL:0000211,1.45e-08,39;CL:0000680,5.80e-07,6;CL:0000187,5.80e-07,6;CL:0000056,5.80e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.34e-11!102;UBERON:0000924!4.34e-11!102;UBERON:0006601!4.34e-11!102;UBERON:0000073!7.01e-10!75;UBERON:0001016!7.01e-10!75;UBERON:0001017!8.56e-09!73;UBERON:0005743!8.56e-09!73;UBERON:0003076!9.33e-08!12;UBERON:0003057!9.33e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,5.95e-16,12;UBERON:0003057,5.95e-16,12;UBERON:0001016,2.80e-14,75;UBERON:0004121,1.30e-12,95;UBERON:0000924,1.30e-12,95;UBERON:0006601,1.30e-12,95;UBERON:0002240,2.22e-12,6;UBERON:0005174,2.22e-12,6;UBERON:0001137,2.22e-12,6;UBERON:0001017,3.80e-12,73;UBERON:0001948,2.39e-10,5;UBERON:0002315,2.39e-10,5;UBERON:0000073,4.26e-09,54;UBERON:0002346,9.62e-09,64;UBERON:0003075,9.62e-09,64;UBERON:0007284,9.62e-09,64;UBERON:0001049,1.43e-08,52;UBERON:0005068,1.43e-08,52;UBERON:0006241,1.43e-08,52;UBERON:0007135,1.43e-08,52;UBERON:0010371,4.95e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.25896817975577,1.92616169317078,1.65192076945513,6.25913075478431,1.30815093828268,16.6961498878199,6.80504646759992,2.65974201088189,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,1.03134418455488,0.202316460859598,0,0,1.35537812827653,2.66788438833342,0.899899717281399,0,0.7104801149461,0,1.53687322128622,0.103689612308478,0,0,5.71301968807607,4.41737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.893811366596314,2.4577045320999,0.131886287730194,0.0914876436024097,0,5.02529398202486,0,0.45839474333043,2.94628585473668,2.70506193518296,1.67759501242771,4.7707501799906,6.34801104896998,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0,1.86391761218122,0,0.209446706813455,0,1.55759661857696,0.599902730993408,0.508280908292259,0.599162557619291,0.457500602818626,0.125654352112864,0,0,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0,1.05220927943237,0,0.229902104433473,0.360124259610698,0.30140963567143,0.272145996605311,0.2562274405697,1.12442069471675,2.06962696591213,0,0,0,0,0.556094498451196,0,0.61734640922383,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,0,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,1.63171705145613,0,0,15.2523060488402,15.1203075703942,0,0,0.94652465824877,0.780877488593277,0.430846795465598,0.477937595905104,1.33679204449436,1.41538265394416,0.404810701674894,1.16902343164525,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,3.0322698992352,2.96188237083818,3.34911444026059,0,0,0.220528398054962,0.98931751764888,0.322928853391811,0.844380948994182,0,0.328281799490123,0,39.1247387242175,0,0.206386867963223,0,0,0,0,1.01987057996313,0.419854356970974,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0.524296722128554,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0.386379188064381,0.187682475451182,0,0.428736758158132,0,0,1.38097570952153,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,1.13175804831646,0.468207537349412,0.704276676453562,0.516919220600519,0.476293691283074,0.579421629724277,0.964546102318525,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.376437521661322,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,0,1.30498519936592,1.77308068276014,0,0.77468420592983,0.578719832943424,2.74791635731741,1.16965804222704,0.644613162144895,0.57386499620653,1.54413993383661,2.08681052058379 | |||
|short_description=p1@Ahnak2 | |||
}} |
Revision as of 19:17, 4 August 2015
Short description: | p1@Ahnak2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ahnak2_5end |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | 0bp_to_ENSMUST00000124526, uc007pff.1_5end |
EntrezGene: | 100041194 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.10e-15 | 10 |
neuron associated cell | 3.10e-15 | 10 |
glial cell (sensu Vertebrata) | 3.10e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 3.10e-15 | 10 |
glial cell | 3.10e-15 | 10 |
glioblast | 3.10e-15 | 10 |
glioblast (sensu Vertebrata) | 3.10e-15 | 10 |
neural cell | 1.07e-13 | 43 |
ectodermal cell | 2.89e-13 | 44 |
neurectodermal cell | 2.89e-13 | 44 |
oligodendrocyte | 6.73e-12 | 6 |
macroglial cell | 6.73e-12 | 6 |
astrocyte | 6.73e-12 | 6 |
oligodendrocyte precursor cell | 1.61e-11 | 8 |
embryonic cell | 3.91e-11 | 70 |
electrically responsive cell | 1.45e-08 | 39 |
electrically active cell | 1.45e-08 | 39 |
muscle precursor cell | 5.80e-07 | 6 |
muscle cell | 5.80e-07 | 6 |
myoblast | 5.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 5.95e-16 | 12 |
chordal neural plate | 5.95e-16 | 12 |
nervous system | 2.80e-14 | 75 |
ectoderm-derived structure | 1.30e-12 | 95 |
ectoderm | 1.30e-12 | 95 |
presumptive ectoderm | 1.30e-12 | 95 |
spinal cord | 2.22e-12 | 6 |
dorsal region element | 2.22e-12 | 6 |
dorsum | 2.22e-12 | 6 |
central nervous system | 3.80e-12 | 73 |
regional part of spinal cord | 2.39e-10 | 5 |
gray matter of spinal cord | 2.39e-10 | 5 |
regional part of nervous system | 4.26e-09 | 54 |
neurectoderm | 9.62e-09 | 64 |
neural plate | 9.62e-09 | 64 |
presumptive neural plate | 9.62e-09 | 64 |
neural tube | 1.43e-08 | 52 |
neural rod | 1.43e-08 | 52 |
future spinal cord | 1.43e-08 | 52 |
neural keel | 1.43e-08 | 52 |
ecto-epithelium | 4.95e-07 | 73 |