FFCP PHASE1:Mm9::chr1:134463580..134463593,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:134463580..134463593,-|id=chr1:134463580..134463593,-|ontology_enrichment_celltype=CL:0000540!1.05e-20!33;CL:0000047!1.05e-20!33;CL:0000031!1.05e-20!33;CL:0000404!1.05e-20!33;CL:0002319!4.87e-19!43;CL:0000221!2.77e-18!44;CL:0000133!2.77e-18!44;CL:0000117!2.33e-16!23;CL:0000337!2.33e-16!23;CL:0000393!1.34e-15!39;CL:0000211!1.34e-15!39;CL:0000055!1.93e-14!50;CL:0002321!7.47e-07!70;CL:0000220!7.47e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-23,23;CL:0000337,3.60e-23,23;CL:0000540,5.45e-23,33;CL:0000047,5.45e-23,33;CL:0000031,5.45e-23,33;CL:0000404,5.45e-23,33;CL:0000393,1.38e-18,39;CL:0000211,1.38e-18,39;CL:0002319,2.44e-16,43;CL:0000221,7.68e-16,44;CL:0000133,7.68e-16,44;CL:0002321,5.55e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.40e-46!75;UBERON:0001016!8.40e-46!75;UBERON:0001017!2.39e-45!73;UBERON:0005743!2.39e-45!73;UBERON:0002346!7.47e-40!71;UBERON:0003075!7.47e-40!71;UBERON:0007284!7.47e-40!71;UBERON:0004121!2.24e-39!102;UBERON:0000924!2.24e-39!102;UBERON:0006601!2.24e-39!102;UBERON:0001049!7.58e-37!52;UBERON:0005068!7.58e-37!52;UBERON:0006241!7.58e-37!52;UBERON:0007135!7.58e-37!52;UBERON:0000955!9.11e-33!50;UBERON:0006238!9.11e-33!50;UBERON:0002616!3.77e-32!49;UBERON:0003056!1.57e-31!49;UBERON:0000033!3.07e-31!63;UBERON:0003080!7.17e-30!40;UBERON:0002780!5.56e-29!39;UBERON:0001890!5.56e-29!39;UBERON:0006240!5.56e-29!39;UBERON:0002020!5.32e-27!34;UBERON:0002791!8.74e-23!29;UBERON:0003528!8.74e-23!29;UBERON:0001893!8.74e-23!29;UBERON:0007811!6.01e-18!86;UBERON:0000956!4.62e-17!21;UBERON:0001869!4.62e-17!21;UBERON:0000203!4.62e-17!21;UBERON:0000153!9.88e-15!94;UBERON:0002619!7.70e-14!17;UBERON:0002021!4.02e-10!10;UBERON:0000411!4.02e-10!10;UBERON:0001950!4.02e-10!10;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0000025!3.68e-07!114;UBERON:0001894!4.96e-07!10;UBERON:0006222!4.96e-07!10;UBERON:0002420!7.39e-07!8;UBERON:0007245!7.39e-07!8;UBERON:0010009!7.39e-07!8;UBERON:0010011!7.39e-07!8;UBERON:0000454!7.39e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-49,73;UBERON:0001016,8.59e-48,75;UBERON:0000073,4.42e-46,54;UBERON:0001049,2.36e-45,52;UBERON:0005068,2.36e-45,52;UBERON:0006241,2.36e-45,52;UBERON:0007135,2.36e-45,52;UBERON:0002346,2.48e-42,64;UBERON:0003075,2.48e-42,64;UBERON:0007284,2.48e-42,64;UBERON:0004121,7.25e-38,95;UBERON:0000924,7.25e-38,95;UBERON:0006601,7.25e-38,95;UBERON:0002616,3.01e-37,46;UBERON:0002020,5.39e-37,34;UBERON:0000955,2.77e-36,47;UBERON:0006238,2.77e-36,47;UBERON:0010371,5.59e-36,73;UBERON:0003080,1.56e-32,40;UBERON:0003528,3.81e-31,29;UBERON:0002791,3.81e-31,29;UBERON:0001893,3.81e-31,29;UBERON:0002780,6.68e-31,39;UBERON:0001890,6.68e-31,39;UBERON:0006240,6.68e-31,39;UBERON:0003056,1.47e-27,49;UBERON:0010314,1.22e-26,92;UBERON:0000956,3.65e-24,21;UBERON:0001869,3.65e-24,21;UBERON:0000203,3.65e-24,21;UBERON:0002021,9.19e-20,10;UBERON:0000411,9.19e-20,10;UBERON:0001950,9.19e-20,10;UBERON:0002619,1.12e-17,17;UBERON:0000025,7.29e-16,114;UBERON:0004111,3.04e-14,122;UBERON:0011216,1.63e-12,194;UBERON:0003076,1.74e-12,12;UBERON:0003057,1.74e-12,12;UBERON:0000483,1.06e-09,174;UBERON:0000119,1.75e-09,176;UBERON:0002240,9.70e-09,6;UBERON:0005174,9.70e-09,6;UBERON:0001137,9.70e-09,6;UBERON:0002420,4.93e-08,8;UBERON:0007245,4.93e-08,8;UBERON:0010009,4.93e-08,8;UBERON:0010011,4.93e-08,8;UBERON:0000454,4.93e-08,8;UBERON:0001948,8.14e-07,5;UBERON:0002315,8.14e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0.599200221036809,0,2.07379224616955,2.16009501330705,1.26194976810829,2.57085885963423,0.883474163806454,1.10241719293459,0.766763768145891,0.919218786610021,0,2.55374676170375,2.61131106535614,1.05509030184155,2.01272815925301,1.04182674111352,1.95428099300967,0.56276261003168,3.66715794664344,3.53554302568401,2.27794689278565,1.1183966749518,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,1.79748767285787,0.457500602818626,1.25654352112864,1.73824320192276,0.767146371990992,1.66230435647648,3.0825839982874,0,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,0.90422890701429,0.408218994907967,0,0.843315521037559,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,1.74937841044784,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,5.0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:134463580..134463593,- | |||
|description=CAGE_peak_at_chr1:134463580..134463593,- | |||
|id=chr1:134463580..134463593,- | |||
|ontology_enrichment_celltype=CL:0000540!1.05e-20!33;CL:0000047!1.05e-20!33;CL:0000031!1.05e-20!33;CL:0000404!1.05e-20!33;CL:0002319!4.87e-19!43;CL:0000221!2.77e-18!44;CL:0000133!2.77e-18!44;CL:0000117!2.33e-16!23;CL:0000337!2.33e-16!23;CL:0000393!1.34e-15!39;CL:0000211!1.34e-15!39;CL:0000055!1.93e-14!50;CL:0002321!7.47e-07!70;CL:0000220!7.47e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-23,23;CL:0000337,3.60e-23,23;CL:0000540,5.45e-23,33;CL:0000047,5.45e-23,33;CL:0000031,5.45e-23,33;CL:0000404,5.45e-23,33;CL:0000393,1.38e-18,39;CL:0000211,1.38e-18,39;CL:0002319,2.44e-16,43;CL:0000221,7.68e-16,44;CL:0000133,7.68e-16,44;CL:0002321,5.55e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.40e-46!75;UBERON:0001016!8.40e-46!75;UBERON:0001017!2.39e-45!73;UBERON:0005743!2.39e-45!73;UBERON:0002346!7.47e-40!71;UBERON:0003075!7.47e-40!71;UBERON:0007284!7.47e-40!71;UBERON:0004121!2.24e-39!102;UBERON:0000924!2.24e-39!102;UBERON:0006601!2.24e-39!102;UBERON:0001049!7.58e-37!52;UBERON:0005068!7.58e-37!52;UBERON:0006241!7.58e-37!52;UBERON:0007135!7.58e-37!52;UBERON:0000955!9.11e-33!50;UBERON:0006238!9.11e-33!50;UBERON:0002616!3.77e-32!49;UBERON:0003056!1.57e-31!49;UBERON:0000033!3.07e-31!63;UBERON:0003080!7.17e-30!40;UBERON:0002780!5.56e-29!39;UBERON:0001890!5.56e-29!39;UBERON:0006240!5.56e-29!39;UBERON:0002020!5.32e-27!34;UBERON:0002791!8.74e-23!29;UBERON:0003528!8.74e-23!29;UBERON:0001893!8.74e-23!29;UBERON:0007811!6.01e-18!86;UBERON:0000956!4.62e-17!21;UBERON:0001869!4.62e-17!21;UBERON:0000203!4.62e-17!21;UBERON:0000153!9.88e-15!94;UBERON:0002619!7.70e-14!17;UBERON:0002021!4.02e-10!10;UBERON:0000411!4.02e-10!10;UBERON:0001950!4.02e-10!10;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0000025!3.68e-07!114;UBERON:0001894!4.96e-07!10;UBERON:0006222!4.96e-07!10;UBERON:0002420!7.39e-07!8;UBERON:0007245!7.39e-07!8;UBERON:0010009!7.39e-07!8;UBERON:0010011!7.39e-07!8;UBERON:0000454!7.39e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-49,73;UBERON:0001016,8.59e-48,75;UBERON:0000073,4.42e-46,54;UBERON:0001049,2.36e-45,52;UBERON:0005068,2.36e-45,52;UBERON:0006241,2.36e-45,52;UBERON:0007135,2.36e-45,52;UBERON:0002346,2.48e-42,64;UBERON:0003075,2.48e-42,64;UBERON:0007284,2.48e-42,64;UBERON:0004121,7.25e-38,95;UBERON:0000924,7.25e-38,95;UBERON:0006601,7.25e-38,95;UBERON:0002616,3.01e-37,46;UBERON:0002020,5.39e-37,34;UBERON:0000955,2.77e-36,47;UBERON:0006238,2.77e-36,47;UBERON:0010371,5.59e-36,73;UBERON:0003080,1.56e-32,40;UBERON:0003528,3.81e-31,29;UBERON:0002791,3.81e-31,29;UBERON:0001893,3.81e-31,29;UBERON:0002780,6.68e-31,39;UBERON:0001890,6.68e-31,39;UBERON:0006240,6.68e-31,39;UBERON:0003056,1.47e-27,49;UBERON:0010314,1.22e-26,92;UBERON:0000956,3.65e-24,21;UBERON:0001869,3.65e-24,21;UBERON:0000203,3.65e-24,21;UBERON:0002021,9.19e-20,10;UBERON:0000411,9.19e-20,10;UBERON:0001950,9.19e-20,10;UBERON:0002619,1.12e-17,17;UBERON:0000025,7.29e-16,114;UBERON:0004111,3.04e-14,122;UBERON:0011216,1.63e-12,194;UBERON:0003076,1.74e-12,12;UBERON:0003057,1.74e-12,12;UBERON:0000483,1.06e-09,174;UBERON:0000119,1.75e-09,176;UBERON:0002240,9.70e-09,6;UBERON:0005174,9.70e-09,6;UBERON:0001137,9.70e-09,6;UBERON:0002420,4.93e-08,8;UBERON:0007245,4.93e-08,8;UBERON:0010009,4.93e-08,8;UBERON:0010011,4.93e-08,8;UBERON:0000454,4.93e-08,8;UBERON:0001948,8.14e-07,5;UBERON:0002315,8.14e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.26766280701236,0,0,0,0,0,0.599200221036809,0,2.07379224616955,2.16009501330705,1.26194976810829,2.57085885963423,0.883474163806454,1.10241719293459,0.766763768145891,0.919218786610021,0,2.55374676170375,2.61131106535614,1.05509030184155,2.01272815925301,1.04182674111352,1.95428099300967,0.56276261003168,3.66715794664344,3.53554302568401,2.27794689278565,1.1183966749518,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,1.79748767285787,0.457500602818626,1.25654352112864,1.73824320192276,0.767146371990992,1.66230435647648,3.0825839982874,0,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,0.90422890701429,0.408218994907967,0,0.843315521037559,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,1.74937841044784,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,5.04010252346474,0,0,0.315508219416257,1.17131623288992,1.93881057959519,0.477937595905104,1.11399337041197,0.849229592366497,1.61924280669958,0.292255857911312,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,1.08036656418786,0.388076051348264,0.214337035031592,0.532020700926821,0.891844088010353,1.31639216481697,0.304464949114599,0,0,0,0,0,0,0,0,0,5.00648315428376,0.170870880797853,0,0,0,0.27338845544205,0,0,0,0,0.954670618015114,0.316335993581135,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.52390283808612,4.01026859407578,4.29632955859219,1.37016503954128,4.5323633843382,1.35004500046361,2.2516060161211,3.17199686288943,1.03552062350364,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr1:134463580..134463593,- | |||
}} |
Latest revision as of 19:04, 4 August 2015
Short description: | p@chr1:134463580..134463593, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:134463580..134463593, - |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.60e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.60e-23 | 23 |
neuron | 5.45e-23 | 33 |
neuronal stem cell | 5.45e-23 | 33 |
neuroblast | 5.45e-23 | 33 |
electrically signaling cell | 5.45e-23 | 33 |
electrically responsive cell | 1.38e-18 | 39 |
electrically active cell | 1.38e-18 | 39 |
neural cell | 2.44e-16 | 43 |
ectodermal cell | 7.68e-16 | 44 |
neurectodermal cell | 7.68e-16 | 44 |
embryonic cell | 5.55e-08 | 70 |