FFCP PHASE1:Mm9::chr2:180625380..180625391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1538 | |MCL_coexpression_id=1538 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:180625380..180625391,+ | |||
|description=CAGE_peak_at_chr2:180625380..180625391,+ | |description=CAGE_peak_at_chr2:180625380..180625391,+ | ||
|id=chr2:180625380..180625391,+ | |id=chr2:180625380..180625391,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.41e-23!23;CL:0000337!1.41e-23!23;CL:0000540!1.61e-14!33;CL:0000047!1.61e-14!33;CL:0000031!1.61e-14!33;CL:0000404!1.61e-14!33;CL:0000393!2.33e-11!39;CL:0000211!2.33e-11!39;CL:0002609!8.10e-10!6;CL:0002319!9.21e-10!43;CL:0000221!2.07e-09!44;CL:0000133!2.07e-09!44;CL:0000055!1.29e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.41e-23!23;CL:0000337!1.41e-23!23;CL:0000540!1.61e-14!33;CL:0000047!1.61e-14!33;CL:0000031!1.61e-14!33;CL:0000404!1.61e-14!33;CL:0000393!2.33e-11!39;CL:0000211!2.33e-11!39;CL:0002609!8.10e-10!6;CL:0002319!9.21e-10!43;CL:0000221!2.07e-09!44;CL:0000133!2.07e-09!44;CL:0000055!1.29e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.57e-26,23;CL:0000337,2.57e-26,23;CL:0002608,2.21e-20,3;CL:0000120,1.29e-19,3;CL:0000540,4.81e-18,33;CL:0000047,4.81e-18,33;CL:0000031,4.81e-18,33;CL:0000404,4.81e-18,33;CL:0000393,4.15e-15,39;CL:0000211,4.15e-15,39;CL:0002319,1.33e-13,43;CL:0000221,2.86e-13,44;CL:0000133,2.86e-13,44;CL:0002611,5.32e-13,2;CL:0002609,1.73e-10,6;CL:0002321,6.46e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.80e-23!34;UBERON:0001049!1.81e-20!52;UBERON:0005068!1.81e-20!52;UBERON:0006241!1.81e-20!52;UBERON:0007135!1.81e-20!52;UBERON:0001017!1.19e-19!73;UBERON:0005743!1.19e-19!73;UBERON:0003056!3.39e-19!49;UBERON:0000073!7.80e-19!75;UBERON:0001016!7.80e-19!75;UBERON:0000033!5.92e-18!63;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0000955!8.02e-18!50;UBERON:0006238!8.02e-18!50;UBERON:0003080!2.08e-17!40;UBERON:0002791!7.51e-17!29;UBERON:0003528!7.51e-17!29;UBERON:0001893!7.51e-17!29;UBERON:0002616!1.17e-16!49;UBERON:0002780!2.05e-16!39;UBERON:0001890!2.05e-16!39;UBERON:0006240!2.05e-16!39;UBERON:0004121!2.41e-15!102;UBERON:0000924!2.41e-15!102;UBERON:0006601!2.41e-15!102;UBERON:0000956!1.42e-11!21;UBERON:0001869!1.42e-11!21;UBERON:0000203!1.42e-11!21;UBERON:0007811!1.29e-10!86;UBERON:0002619!4.25e-09!17;UBERON:0000153!6.02e-09!94;UBERON:0001948!1.99e-08!5;UBERON:0002315!1.99e-08!5;UBERON:0000369!2.29e-08!5;UBERON:0002435!2.29e-08!5;UBERON:0000204!2.29e-08!5;UBERON:0010082!2.29e-08!5;UBERON:0002240!6.71e-07!6;UBERON:0005174!6.71e-07!6;UBERON:0001137!6.71e-07!6 | |ontology_enrichment_uberon=UBERON:0002020!2.80e-23!34;UBERON:0001049!1.81e-20!52;UBERON:0005068!1.81e-20!52;UBERON:0006241!1.81e-20!52;UBERON:0007135!1.81e-20!52;UBERON:0001017!1.19e-19!73;UBERON:0005743!1.19e-19!73;UBERON:0003056!3.39e-19!49;UBERON:0000073!7.80e-19!75;UBERON:0001016!7.80e-19!75;UBERON:0000033!5.92e-18!63;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0000955!8.02e-18!50;UBERON:0006238!8.02e-18!50;UBERON:0003080!2.08e-17!40;UBERON:0002791!7.51e-17!29;UBERON:0003528!7.51e-17!29;UBERON:0001893!7.51e-17!29;UBERON:0002616!1.17e-16!49;UBERON:0002780!2.05e-16!39;UBERON:0001890!2.05e-16!39;UBERON:0006240!2.05e-16!39;UBERON:0004121!2.41e-15!102;UBERON:0000924!2.41e-15!102;UBERON:0006601!2.41e-15!102;UBERON:0000956!1.42e-11!21;UBERON:0001869!1.42e-11!21;UBERON:0000203!1.42e-11!21;UBERON:0007811!1.29e-10!86;UBERON:0002619!4.25e-09!17;UBERON:0000153!6.02e-09!94;UBERON:0001948!1.99e-08!5;UBERON:0002315!1.99e-08!5;UBERON:0000369!2.29e-08!5;UBERON:0002435!2.29e-08!5;UBERON:0000204!2.29e-08!5;UBERON:0010082!2.29e-08!5;UBERON:0002240!6.71e-07!6;UBERON:0005174!6.71e-07!6;UBERON:0001137!6.71e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.50e-15,7;UBERON:0003022,4.50e-15,7;UBERON:0002421,4.50e-15,7;UBERON:0000349,4.50e-15,7;UBERON:0002600,4.50e-15,7;UBERON:0002020,3.75e-14,34;UBERON:0001017,2.52e-13,73;UBERON:0002256,5.32e-13,2;UBERON:0001016,6.22e-13,75;UBERON:0001948,1.19e-11,5;UBERON:0002315,1.19e-11,5;UBERON:0004121,6.62e-10,95;UBERON:0000924,6.62e-10,95;UBERON:0006601,6.62e-10,95;UBERON:0002240,8.35e-10,6;UBERON:0005174,8.35e-10,6;UBERON:0001137,8.35e-10,6;UBERON:0001049,6.38e-09,52;UBERON:0005068,6.38e-09,52;UBERON:0006241,6.38e-09,52;UBERON:0007135,6.38e-09,52;UBERON:0000073,1.49e-08,54;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29;UBERON:0002346,4.66e-07,64;UBERON:0003075,4.66e-07,64;UBERON:0007284,4.66e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,1.14260393761521,1.32521124570968,2.9397791811589,3.25874601462004,5.51531271966013,0,0.255374676170375,0.307213066512487,1.05509030184155,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.589257170947335,0.854230084794618,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,5.90575454930463,0,0,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,1.60459604795908,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.841299845405528,1.14260393761521,1.32521124570968,2.9397791811589,3.25874601462004,5.51531271966013,0,0.255374676170375,0.307213066512487,1.05509030184155,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.589257170947335,0.854230084794618,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,5.90575454930463,0,0,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.859265911718438,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,1.60459604795908,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.507687647350059,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr2:180625380..180625391,+ | |short_description=p@chr2:180625380..180625391,+ | ||
}} | }} |
Latest revision as of 17:46, 4 August 2015
Short description: | p@chr2:180625380..180625391, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180625380..180625391, + |
Coexpression cluster: | MCL_coexpression_mm9:1538 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.57e-26 | 23 |
neuroblast (sensu Vertebrata) | 2.57e-26 | 23 |
hippocampal neuron | 2.21e-20 | 3 |
granule cell | 1.29e-19 | 3 |
neuron | 4.81e-18 | 33 |
neuronal stem cell | 4.81e-18 | 33 |
neuroblast | 4.81e-18 | 33 |
electrically signaling cell | 4.81e-18 | 33 |
electrically responsive cell | 4.15e-15 | 39 |
electrically active cell | 4.15e-15 | 39 |
neural cell | 1.33e-13 | 43 |
ectodermal cell | 2.86e-13 | 44 |
neurectodermal cell | 2.86e-13 | 44 |
neuron of the dorsal spinal cord | 5.32e-13 | 2 |
neuron of cerebral cortex | 1.73e-10 | 6 |
embryonic cell | 6.46e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.50e-15 | 7 |
lobe parts of cerebral cortex | 4.50e-15 | 7 |
hippocampal formation | 4.50e-15 | 7 |
limbic system | 4.50e-15 | 7 |
limbic lobe | 4.50e-15 | 7 |
gray matter | 3.75e-14 | 34 |
central nervous system | 2.52e-13 | 73 |
dorsal horn of spinal cord | 5.32e-13 | 2 |
nervous system | 6.22e-13 | 75 |
regional part of spinal cord | 1.19e-11 | 5 |
gray matter of spinal cord | 1.19e-11 | 5 |
ectoderm-derived structure | 6.62e-10 | 95 |
ectoderm | 6.62e-10 | 95 |
presumptive ectoderm | 6.62e-10 | 95 |
spinal cord | 8.35e-10 | 6 |
dorsal region element | 8.35e-10 | 6 |
dorsum | 8.35e-10 | 6 |
neural tube | 6.38e-09 | 52 |
neural rod | 6.38e-09 | 52 |
future spinal cord | 6.38e-09 | 52 |
neural keel | 6.38e-09 | 52 |
regional part of nervous system | 1.49e-08 | 54 |
brain grey matter | 1.15e-07 | 29 |
regional part of telencephalon | 1.15e-07 | 29 |
telencephalon | 1.15e-07 | 29 |
neurectoderm | 4.66e-07 | 64 |
neural plate | 4.66e-07 | 64 |
presumptive neural plate | 4.66e-07 | 64 |