FFCP PHASE1:Mm9::chr5:89456984..89456992,+: Difference between revisions
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{{FFCP|EntrezGene=54403|HGNC=|MCL_coexpression_id=11|UniProt=O88343|association_with_transcript=0bp_to_ENSMUST00000130041_5end|description=CAGE_peak_7_at_Slc4a4_5end|id=chr5:89456984..89456992,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!7.85e-30!14;UBERON:0003918!7.85e-30!14;UBERON:0005095!7.85e-30!14;UBERON:0007687!7.85e-30!14;UBERON:0006554!5.64e-26!16;UBERON:0001008!2.19e-24!17;UBERON:0000489!1.54e-19!21;UBERON:0003103!5.91e-09!43;UBERON:0005172!1.03e-07!49;UBERON:0005173!1.03e-07!49;UBERON:0002417!1.03e-07!49;UBERON:0000916!1.03e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.19e-30,14;UBERON:0003918,1.19e-30,14;UBERON:0011143,1.19e-30,14;UBERON:0005095,1.19e-30,14;UBERON:0007687,1.19e-30,14;UBERON:0006554,8.03e-24,18;UBERON:0001008,1.46e-22,19;UBERON:0000489,2.12e-20,21;UBERON:0003103,7.68e-10,43;UBERON:0005172,1.35e-08,49;UBERON:0005173,1.35e-08,49;UBERON:0002417,1.35e-08,49;UBERON:0000916,1.35e-08,49;UBERON:0003104,7.87e-07,61;UBERON:0009142,7.87e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,2.25415471346161,0.814605311381257,1.35766741017338,3.85747009396752,8.41045943752622,18.7464887934095,25.9047900938268,34.1810144063387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Slc4a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54403 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88343 | |||
|association_with_transcript=0bp_to_ENSMUST00000130041_5end | |||
|cluster_id=chr5:89456984..89456992,+ | |||
|description=CAGE_peak_7_at_Slc4a4_5end | |||
|id=chr5:89456984..89456992,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.85e-30!14;UBERON:0003918!7.85e-30!14;UBERON:0005095!7.85e-30!14;UBERON:0007687!7.85e-30!14;UBERON:0006554!5.64e-26!16;UBERON:0001008!2.19e-24!17;UBERON:0000489!1.54e-19!21;UBERON:0003103!5.91e-09!43;UBERON:0005172!1.03e-07!49;UBERON:0005173!1.03e-07!49;UBERON:0002417!1.03e-07!49;UBERON:0000916!1.03e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.19e-30,14;UBERON:0003918,1.19e-30,14;UBERON:0011143,1.19e-30,14;UBERON:0005095,1.19e-30,14;UBERON:0007687,1.19e-30,14;UBERON:0006554,8.03e-24,18;UBERON:0001008,1.46e-22,19;UBERON:0000489,2.12e-20,21;UBERON:0003103,7.68e-10,43;UBERON:0005172,1.35e-08,49;UBERON:0005173,1.35e-08,49;UBERON:0002417,1.35e-08,49;UBERON:0000916,1.35e-08,49;UBERON:0003104,7.87e-07,61;UBERON:0009142,7.87e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,3.65388415100992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,2.25415471346161,0.814605311381257,1.35766741017338,3.85747009396752,8.41045943752622,18.7464887934095,25.9047900938268,34.1810144063387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Slc4a4 | |||
}} |
Revision as of 17:32, 4 August 2015
Short description: | p7@Slc4a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Slc4a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000130041_5end |
EntrezGene: | 54403 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.19e-30 | 14 |
kidney mesenchyme | 1.19e-30 | 14 |
upper urinary tract | 1.19e-30 | 14 |
kidney rudiment | 1.19e-30 | 14 |
kidney field | 1.19e-30 | 14 |
urinary system structure | 8.03e-24 | 18 |
renal system | 1.46e-22 | 19 |
cavitated compound organ | 2.12e-20 | 21 |
compound organ | 7.68e-10 | 43 |
abdomen element | 1.35e-08 | 49 |
abdominal segment element | 1.35e-08 | 49 |
abdominal segment of trunk | 1.35e-08 | 49 |
abdomen | 1.35e-08 | 49 |
mesenchyme | 7.87e-07 | 61 |
entire embryonic mesenchyme | 7.87e-07 | 61 |