FFCP PHASE1:Mm9::chr7:19152867..19152872,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=545925|HGNC=|MCL_coexpression_id=58|UniProt=Q497W2|association_with_transcript=-213bp_to_ENSMUST00000094794,NM_001037168,uc009fjn.1_5end|description=CAGE_peak_5_at_Psg27_5end|id=chr7:19152867..19152872,-|ontology_enrichment_celltype=CL:0000473!1.46e-25!3;CL:0000627!1.46e-25!3;CL:0000682!1.46e-25!3;CL:0000239!1.52e-21!6;CL:0000677!1.52e-21!6;CL:0000212!1.52e-21!6;CL:0000584!1.52e-21!6;CL:0000075!1.57e-18!7;CL:0000066!1.41e-15!25;CL:0002563!1.68e-14!9;CL:0002251!1.68e-14!9;CL:0002076!7.93e-09!15|ontology_enrichment_celltype_v019_2=CL:0000682,1.17e-38,3;CL:0000473,4.54e-17,7;CL:0000066,6.09e-13,25;CL:0000239,2.87e-09,6;CL:0000677,2.87e-09,6;CL:0000584,2.87e-09,6;CL:0000075,4.45e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.85e-25!15;UBERON:0004923!1.59e-20!24;UBERON:0001962!6.88e-17!2;UBERON:0001961!6.88e-17!2;UBERON:0001744!6.88e-17!2;UBERON:0001242!2.93e-15!13;UBERON:0000060!2.93e-15!13;UBERON:0001262!2.93e-15!13;UBERON:0004786!2.93e-15!13;UBERON:0003350!1.68e-14!9;UBERON:0004808!1.68e-14!9;UBERON:0001277!1.68e-14!9;UBERON:0000485!6.29e-12!11;UBERON:0002465!1.37e-11!3;UBERON:0003199!2.52e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-25,2;UBERON:0001961,3.19e-25,2;UBERON:0001744,3.19e-25,2;UBERON:0002465,3.41e-17,3;UBERON:0000344,1.31e-13,15;UBERON:0003199,1.55e-13,1;UBERON:0004923,1.10e-08,24|phase1_expression=0,2.09385244583617,2.27499619694768,0,0,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,4.01962374880514,2.58457197695445,5.17130958446134,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Psg27}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545925 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q497W2 | |||
|association_with_transcript=-213bp_to_ENSMUST00000094794,NM_001037168,uc009fjn.1_5end | |||
|cluster_id=chr7:19152867..19152872,- | |||
|description=CAGE_peak_5_at_Psg27_5end | |||
|id=chr7:19152867..19152872,- | |||
|ontology_enrichment_celltype=CL:0000473!1.46e-25!3;CL:0000627!1.46e-25!3;CL:0000682!1.46e-25!3;CL:0000239!1.52e-21!6;CL:0000677!1.52e-21!6;CL:0000212!1.52e-21!6;CL:0000584!1.52e-21!6;CL:0000075!1.57e-18!7;CL:0000066!1.41e-15!25;CL:0002563!1.68e-14!9;CL:0002251!1.68e-14!9;CL:0002076!7.93e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.17e-38,3;CL:0000473,4.54e-17,7;CL:0000066,6.09e-13,25;CL:0000239,2.87e-09,6;CL:0000677,2.87e-09,6;CL:0000584,2.87e-09,6;CL:0000075,4.45e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.85e-25!15;UBERON:0004923!1.59e-20!24;UBERON:0001962!6.88e-17!2;UBERON:0001961!6.88e-17!2;UBERON:0001744!6.88e-17!2;UBERON:0001242!2.93e-15!13;UBERON:0000060!2.93e-15!13;UBERON:0001262!2.93e-15!13;UBERON:0004786!2.93e-15!13;UBERON:0003350!1.68e-14!9;UBERON:0004808!1.68e-14!9;UBERON:0001277!1.68e-14!9;UBERON:0000485!6.29e-12!11;UBERON:0002465!1.37e-11!3;UBERON:0003199!2.52e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-25,2;UBERON:0001961,3.19e-25,2;UBERON:0001744,3.19e-25,2;UBERON:0002465,3.41e-17,3;UBERON:0000344,1.31e-13,15;UBERON:0003199,1.55e-13,1;UBERON:0004923,1.10e-08,24 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,0,0,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,4.01962374880514,2.58457197695445,5.17130958446134,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Psg27 | |||
}} |
Revision as of 17:12, 4 August 2015
Short description: | p5@Psg27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Psg27_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -213bp_to_ENSMUST00000094794, NM_001037168, uc009fjn.1_5end |
EntrezGene: | 545925 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.17e-38 | 3 |
defensive cell | 4.54e-17 | 7 |
epithelial cell | 6.09e-13 | 25 |
brush border epithelial cell | 2.87e-09 | 6 |
gut absorptive cell | 2.87e-09 | 6 |
enterocyte | 2.87e-09 | 6 |
columnar/cuboidal epithelial cell | 4.45e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.19e-25 | 2 |
mucosa-associated lymphoid tissue | 3.19e-25 | 2 |
lymphoid tissue | 3.19e-25 | 2 |
lymphoid system | 3.41e-17 | 3 |
mucosa | 1.31e-13 | 15 |
egg chamber | 1.55e-13 | 1 |
organ component layer | 1.10e-08 | 24 |