FFCP PHASE1:Mm9::chr12:110797713..110797728,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:110797713..110797728,+
|short_description=p@chr12:110797713..110797728,+
|description=CAGE_peak_at_chr12:110797713..110797728,+
|association_with_transcri...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:110797713..110797728,+ | |||
|description=CAGE_peak_at_chr12:110797713..110797728,+ | |||
|id=chr12:110797713..110797728,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.78e-07,3;CL:0000117,2.21e-07,23;CL:0000337,2.21e-07,23;CL:0002612,2.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.25e-19!71;UBERON:0003075!6.25e-19!71;UBERON:0007284!6.25e-19!71;UBERON:0001049!1.26e-17!52;UBERON:0005068!1.26e-17!52;UBERON:0006241!1.26e-17!52;UBERON:0007135!1.26e-17!52;UBERON:0001017!3.70e-17!73;UBERON:0005743!3.70e-17!73;UBERON:0000073!1.26e-16!75;UBERON:0001016!1.26e-16!75;UBERON:0000955!1.40e-16!50;UBERON:0006238!1.40e-16!50;UBERON:0004121!3.16e-16!102;UBERON:0000924!3.16e-16!102;UBERON:0006601!3.16e-16!102;UBERON:0002616!6.29e-16!49;UBERON:0000033!1.57e-15!63;UBERON:0003056!3.01e-13!49;UBERON:0003080!1.31e-12!40;UBERON:0002020!1.55e-12!34;UBERON:0002780!5.46e-12!39;UBERON:0001890!5.46e-12!39;UBERON:0006240!5.46e-12!39;UBERON:0002021!1.12e-09!10;UBERON:0000411!1.12e-09!10;UBERON:0001950!1.12e-09!10;UBERON:0002791!2.09e-09!29;UBERON:0003528!2.09e-09!29;UBERON:0001893!2.09e-09!29;UBERON:0007811!9.78e-08!86;UBERON:0002619!1.05e-07!17;UBERON:0000153!3.71e-07!94;UBERON:0000956!8.65e-07!21;UBERON:0001869!8.65e-07!21;UBERON:0000203!8.65e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.87e-34,54;UBERON:0001049,4.56e-30,52;UBERON:0005068,4.56e-30,52;UBERON:0006241,4.56e-30,52;UBERON:0007135,4.56e-30,52;UBERON:0002346,1.14e-26,64;UBERON:0003075,1.14e-26,64;UBERON:0007284,1.14e-26,64;UBERON:0001017,2.05e-26,73;UBERON:0002020,6.58e-26,34;UBERON:0001016,1.72e-25,75;UBERON:0000955,1.26e-24,47;UBERON:0006238,1.26e-24,47;UBERON:0002616,3.37e-23,46;UBERON:0010371,2.07e-22,73;UBERON:0002021,2.78e-22,10;UBERON:0000411,2.78e-22,10;UBERON:0001950,2.78e-22,10;UBERON:0004121,3.50e-21,95;UBERON:0000924,3.50e-21,95;UBERON:0006601,3.50e-21,95;UBERON:0003080,8.48e-21,40;UBERON:0003528,2.69e-20,29;UBERON:0002791,2.69e-20,29;UBERON:0001893,2.69e-20,29;UBERON:0002780,2.12e-19,39;UBERON:0001890,2.12e-19,39;UBERON:0006240,2.12e-19,39;UBERON:0003056,2.56e-19,49;UBERON:0010314,1.18e-18,92;UBERON:0002619,9.11e-17,17;UBERON:0000956,3.14e-15,21;UBERON:0001869,3.14e-15,21;UBERON:0000203,3.14e-15,21;UBERON:0000025,1.14e-10,114;UBERON:0003076,9.94e-10,12;UBERON:0003057,9.94e-10,12;UBERON:0004111,1.75e-09,122;UBERON:0002240,2.19e-08,6;UBERON:0005174,2.19e-08,6;UBERON:0001137,2.19e-08,6;UBERON:0004684,1.78e-07,3;UBERON:0002275,1.78e-07,3;UBERON:0002257,2.90e-07,3;UBERON:0001948,5.51e-07,5;UBERON:0002315,5.51e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,1.42825492201902,0.883474163806454,0.122490799214954,0.479227355091182,0,6.60695285996332,5.61824287574826,6.91229399653096,0.131886287730194,1.28082701043374,0,0.279182999001381,2.25105044012672,9.32069311438542,11.1958862479994,5.12538050876771,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0,1.05505848386836,1.05829836422134,0,0.247194967734374,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0,0,0,0,2.24685959107234,5.49000723382352,1.88481528169297,1.73824320192276,4.09144731728529,1.66230435647648,3.24482526135515,0.305518091550949,0.124406970610093,0,0,0.260240885925407,0,0,1.05493372485001,0.884474488967262,0.768682321709099,0.187403449119458,3.3631438196072,0,0,0,0,0.834141747676794,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.26173969138476,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0.199141273254367,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,4.31304619582064,0,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.963303539926752,2.34423373184406,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,1.92792789853084,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,1.70219802876894,0,0.517434735131018,0,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0,0.836353184057875,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8023439734704,15.651058041244,16.0410743763031,12.7171354934329,4.11049511862385,18.1294535373528,5.40018000185445,10.8077088773813,10.4222754066367,19.1571315348173,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.749132059759059,0.576226371643824,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.883193520806384,1.71434626192708,1.24233064311536,0.238436189947321,0.436039249896986,0.0941093804153306,0.423073039458382,1.64635175585495,1.31534855718921,0.135804113845862,0,0.355905054372522,0.886540341380071,0.818462086339379,0.309873682371932,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,1.42825492201902,0.883474163806454,0.122490799214954,0.479227355091182,0,6.60695285996332,5.61824287574826,6.91229399653096,0.131886287730194,1.28082701043374,0,0.279182999001381,2.25105044012672,9.32069311438542,11.1958862479994,5.12538050876771,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0,1.05505848386836,1.05829836422134,0,0.247194967734374,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0,0,0,0,2.24685959107234,5.49000723382352,1.88481528169297,1.73824320192276,4.09144731728529,1.66230435647648,3.24482526135515,0.305518091550949,0.124406970610093,0,0,0.260240885925407,0,0,1.05493372485001,0.884474488967262,0.768682321709099,0.187403449119458,3.3631438196072,0,0,0,0,0.834141747676794,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.26173969138476,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0.864552199498777,0.199141273254367,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,4.31304619582064,0,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.963303539926752,2.34423373184406,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,1.92792789853084,0,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,1.70219802876894,0,0.517434735131018,0,0.709360934569094,0.535106452806212,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0,0.119372344003136,0.164140899745061,0,1.11255181206306,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0,0.836353184057875,0.218362563746178,0.404593039154462,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8023439734704,15.651058041244,16.0410743763031,12.7171354934329,4.11049511862385,18.1294535373528,5.40018000185445,10.8077088773813,10.4222754066367,19.1571315348173,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.749132059759059,0.576226371643824,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.883193520806384,1.71434626192708,1.24233064311536,0.238436189947321,0.436039249896986,0.0941093804153306,0.423073039458382,1.64635175585495,1.31534855718921,0.135804113845862,0,0.355905054372522,0.886540341380071,0.818462086339379,0.309873682371932,0,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr12:110797713..110797728,+ | |||
}} | }} |
Latest revision as of 17:08, 4 August 2015
Short description: | p@chr12:110797713..110797728, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110797713..110797728, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.78e-07 | 3 |
CNS neuron (sensu Vertebrata) | 2.21e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.21e-07 | 23 |
neuron of the ventral spinal cord | 2.90e-07 | 3 |