FFCP PHASE1:Mm9::chr12:110797694..110797709,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110797694..110797709,+|id=chr12:110797694..110797709,+|ontology_enrichment_celltype=CL:0000117!5.07e-07!23;CL:0000337!5.07e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.36e-08,23;CL:0000337,6.36e-08,23;CL:0002610,1.38e-07,3;CL:0002614,2.70e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.13e-20!52;UBERON:0005068!1.13e-20!52;UBERON:0006241!1.13e-20!52;UBERON:0007135!1.13e-20!52;UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0000955!8.20e-20!50;UBERON:0006238!8.20e-20!50;UBERON:0002616!4.71e-19!49;UBERON:0000033!9.79e-19!63;UBERON:0003056!7.74e-17!49;UBERON:0002020!1.22e-16!34;UBERON:0003080!1.92e-15!40;UBERON:0001017!8.72e-15!73;UBERON:0005743!8.72e-15!73;UBERON:0002780!1.10e-14!39;UBERON:0001890!1.10e-14!39;UBERON:0006240!1.10e-14!39;UBERON:0000073!6.70e-14!75;UBERON:0001016!6.70e-14!75;UBERON:0002791!1.47e-13!29;UBERON:0003528!1.47e-13!29;UBERON:0001893!1.47e-13!29;UBERON:0004121!3.04e-12!102;UBERON:0000924!3.04e-12!102;UBERON:0006601!3.04e-12!102;UBERON:0002021!5.91e-10!10;UBERON:0000411!5.91e-10!10;UBERON:0001950!5.91e-10!10;UBERON:0007811!1.92e-09!86;UBERON:0000025!3.37e-09!114;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!4.90e-08!17;UBERON:0000153!6.04e-08!94;UBERON:0004111!2.20e-07!122;UBERON:0002420!8.06e-07!8;UBERON:0007245!8.06e-07!8;UBERON:0010009!8.06e-07!8;UBERON:0010011!8.06e-07!8;UBERON:0000454!8.06e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-35,54;UBERON:0001049,1.73e-31,52;UBERON:0005068,1.73e-31,52;UBERON:0006241,1.73e-31,52;UBERON:0007135,1.73e-31,52;UBERON:0000955,4.81e-30,47;UBERON:0006238,4.81e-30,47;UBERON:0002616,2.46e-28,46;UBERON:0002346,3.09e-28,64;UBERON:0003075,3.09e-28,64;UBERON:0007284,3.09e-28,64;UBERON:0001017,5.28e-28,73;UBERON:0001016,4.61e-27,75;UBERON:0003080,1.01e-25,40;UBERON:0002780,5.61e-24,39;UBERON:0001890,5.61e-24,39;UBERON:0006240,5.61e-24,39;UBERON:0003056,6.06e-24,49;UBERON:0010371,6.91e-24,73;UBERON:0002020,1.13e-23,34;UBERON:0004121,7.58e-23,95;UBERON:0000924,7.58e-23,95;UBERON:0006601,7.58e-23,95;UBERON:0003528,1.24e-22,29;UBERON:0002791,1.24e-22,29;UBERON:0001893,1.24e-22,29;UBERON:0002021,7.79e-20,10;UBERON:0000411,7.79e-20,10;UBERON:0001950,7.79e-20,10;UBERON:0010314,1.70e-17,92;UBERON:0002619,3.21e-13,17;UBERON:0002420,1.57e-12,8;UBERON:0007245,1.57e-12,8;UBERON:0010009,1.57e-12,8;UBERON:0010011,1.57e-12,8;UBERON:0000454,1.57e-12,8;UBERON:0000956,2.29e-12,21;UBERON:0001869,2.29e-12,21;UBERON:0000203,2.29e-12,21;UBERON:0000025,7.78e-12,114;UBERON:0004111,1.31e-10,122;UBERON:0002950,2.38e-09,4;UBERON:0001891,2.38e-09,4;UBERON:0009616,2.38e-09,4;UBERON:0010286,2.38e-09,4;UBERON:0004684,1.38e-07,3;UBERON:0002275,1.38e-07,3;UBERON:0002038,2.70e-07,3;UBERON:0009663,2.70e-07,3;UBERON:0009661,2.70e-07,3;UBERON:0000125,2.70e-07,3;UBERON:0002308,2.70e-07,3;UBERON:0000369,5.12e-07,5;UBERON:0002435,5.12e-07,5;UBERON:0000204,5.12e-07,5;UBERON:0010082,5.12e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,5.61824287574826,5.68344173048101,0.395658863190582,1.00636407962651,1.04182674111352,1.3959149950069,1.12552522006336,6.72312290217964,8.2496003932627,2.98980529678116,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,3.22058876712702,1.04723353406728,0,0,0,0,3.2953940669061,5.03250663100489,1.7591609295801,1.73824320192276,6.13717097592793,1.24672826735736,2.92034273521964,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.0937017245597288,1.81092359517311,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0,1.47202963994889,0.823236899034275,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0,7.18841032636773,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,1.64096361229084,0,0.252470927204373,0,0,0,0,0,0,0,0.584511715822624,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,1.02131881726136,0.18006109403131,0.129358683782755,0,0,1.24858172321449,0.658196082408484,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.582961673259701,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.247960367176008,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.3670958160875,12.889106622201,20.0513429703789,6.53042092906013,0.685082519770642,13.5970901530146,3.37511250115903,5.40385443869065,7.25027854374727,15.5328093525546,0.103787347584177,0.399024873401031,0,0.729320151204882,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0.952587382566147,0.115884325944855,0.578727661391115,0,0.294397840268795,3.08582327146874,0.70990322463735,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0.271608227691724,1.68342681497322,0.118635018124174,0.492522411877817,0.818462086339379,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr12:110797694..110797709,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:110797694..110797709,+ | |||
|description=CAGE_peak_at_chr12:110797694..110797709,+ | |||
|id=chr12:110797694..110797709,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.07e-07!23;CL:0000337!5.07e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.36e-08,23;CL:0000337,6.36e-08,23;CL:0002610,1.38e-07,3;CL:0002614,2.70e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-20!52;UBERON:0005068!1.13e-20!52;UBERON:0006241!1.13e-20!52;UBERON:0007135!1.13e-20!52;UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0000955!8.20e-20!50;UBERON:0006238!8.20e-20!50;UBERON:0002616!4.71e-19!49;UBERON:0000033!9.79e-19!63;UBERON:0003056!7.74e-17!49;UBERON:0002020!1.22e-16!34;UBERON:0003080!1.92e-15!40;UBERON:0001017!8.72e-15!73;UBERON:0005743!8.72e-15!73;UBERON:0002780!1.10e-14!39;UBERON:0001890!1.10e-14!39;UBERON:0006240!1.10e-14!39;UBERON:0000073!6.70e-14!75;UBERON:0001016!6.70e-14!75;UBERON:0002791!1.47e-13!29;UBERON:0003528!1.47e-13!29;UBERON:0001893!1.47e-13!29;UBERON:0004121!3.04e-12!102;UBERON:0000924!3.04e-12!102;UBERON:0006601!3.04e-12!102;UBERON:0002021!5.91e-10!10;UBERON:0000411!5.91e-10!10;UBERON:0001950!5.91e-10!10;UBERON:0007811!1.92e-09!86;UBERON:0000025!3.37e-09!114;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!4.90e-08!17;UBERON:0000153!6.04e-08!94;UBERON:0004111!2.20e-07!122;UBERON:0002420!8.06e-07!8;UBERON:0007245!8.06e-07!8;UBERON:0010009!8.06e-07!8;UBERON:0010011!8.06e-07!8;UBERON:0000454!8.06e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-35,54;UBERON:0001049,1.73e-31,52;UBERON:0005068,1.73e-31,52;UBERON:0006241,1.73e-31,52;UBERON:0007135,1.73e-31,52;UBERON:0000955,4.81e-30,47;UBERON:0006238,4.81e-30,47;UBERON:0002616,2.46e-28,46;UBERON:0002346,3.09e-28,64;UBERON:0003075,3.09e-28,64;UBERON:0007284,3.09e-28,64;UBERON:0001017,5.28e-28,73;UBERON:0001016,4.61e-27,75;UBERON:0003080,1.01e-25,40;UBERON:0002780,5.61e-24,39;UBERON:0001890,5.61e-24,39;UBERON:0006240,5.61e-24,39;UBERON:0003056,6.06e-24,49;UBERON:0010371,6.91e-24,73;UBERON:0002020,1.13e-23,34;UBERON:0004121,7.58e-23,95;UBERON:0000924,7.58e-23,95;UBERON:0006601,7.58e-23,95;UBERON:0003528,1.24e-22,29;UBERON:0002791,1.24e-22,29;UBERON:0001893,1.24e-22,29;UBERON:0002021,7.79e-20,10;UBERON:0000411,7.79e-20,10;UBERON:0001950,7.79e-20,10;UBERON:0010314,1.70e-17,92;UBERON:0002619,3.21e-13,17;UBERON:0002420,1.57e-12,8;UBERON:0007245,1.57e-12,8;UBERON:0010009,1.57e-12,8;UBERON:0010011,1.57e-12,8;UBERON:0000454,1.57e-12,8;UBERON:0000956,2.29e-12,21;UBERON:0001869,2.29e-12,21;UBERON:0000203,2.29e-12,21;UBERON:0000025,7.78e-12,114;UBERON:0004111,1.31e-10,122;UBERON:0002950,2.38e-09,4;UBERON:0001891,2.38e-09,4;UBERON:0009616,2.38e-09,4;UBERON:0010286,2.38e-09,4;UBERON:0004684,1.38e-07,3;UBERON:0002275,1.38e-07,3;UBERON:0002038,2.70e-07,3;UBERON:0009663,2.70e-07,3;UBERON:0009661,2.70e-07,3;UBERON:0000125,2.70e-07,3;UBERON:0002308,2.70e-07,3;UBERON:0000369,5.12e-07,5;UBERON:0002435,5.12e-07,5;UBERON:0000204,5.12e-07,5;UBERON:0010082,5.12e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,5.61824287574826,5.68344173048101,0.395658863190582,1.00636407962651,1.04182674111352,1.3959149950069,1.12552522006336,6.72312290217964,8.2496003932627,2.98980529678116,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,3.22058876712702,1.04723353406728,0,0,0,0,3.2953940669061,5.03250663100489,1.7591609295801,1.73824320192276,6.13717097592793,1.24672826735736,2.92034273521964,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.0937017245597288,1.81092359517311,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.329119699826961,0,0,0,0,0,1.47202963994889,0.823236899034275,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.575392274901621,0.324270453550071,0,7.18841032636773,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,1.64096361229084,0,0.252470927204373,0,0,0,0,0,0,0,0.584511715822624,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,1.02131881726136,0.18006109403131,0.129358683782755,0,0,1.24858172321449,0.658196082408484,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0.582961673259701,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.247960367176008,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.3670958160875,12.889106622201,20.0513429703789,6.53042092906013,0.685082519770642,13.5970901530146,3.37511250115903,5.40385443869065,7.25027854374727,15.5328093525546,0.103787347584177,0.399024873401031,0,0.729320151204882,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0.952587382566147,0.115884325944855,0.578727661391115,0,0.294397840268795,3.08582327146874,0.70990322463735,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0.271608227691724,1.68342681497322,0.118635018124174,0.492522411877817,0.818462086339379,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:110797694..110797709,+ | |||
}} |
Latest revision as of 17:07, 4 August 2015
Short description: | p@chr12:110797694..110797709, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110797694..110797709, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.36e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.36e-08 | 23 |
raphe nuclei neuron | 1.38e-07 | 3 |
neuron of the substantia nigra | 2.70e-07 | 3 |