FFCP PHASE1:Mm9::chr12:109915399..109915403,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:109915399..109915403,+|id=chr12:109915399..109915403,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,3.27e-16,6;CL:0000556,3.27e-16,6;CL:0000839,3.30e-16,13;CL:0000763,4.11e-13,16;CL:0002476,7.29e-13,2;CL:0002031,3.69e-11,25;CL:0000049,5.47e-11,19;CL:0000050,6.81e-11,9;CL:0000988,1.39e-08,32;CL:0002032,1.39e-08,32;CL:0000037,1.39e-08,32;CL:0000837,1.39e-08,32;CL:0000945,2.11e-07,1;CL:0000236,2.11e-07,1;CL:0000826,2.11e-07,1;CL:0002194,7.28e-07,4;CL:0000766,7.28e-07,4;CL:0000234,7.28e-07,4;CL:0000576,7.28e-07,4;CL:0000235,7.28e-07,4;CL:0000864,7.28e-07,4;CL:0002009,7.28e-07,4;CL:0000040,7.28e-07,4;CL:0000559,7.28e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.17e-09!59;UBERON:0000160!7.15e-09!43;UBERON:0000344!5.17e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.99e-19,3;UBERON:0001962,3.67e-13,2;UBERON:0001961,3.67e-13,2;UBERON:0001744,3.67e-13,2;UBERON:0002371,4.11e-13,16;UBERON:0001474,1.93e-09,22;UBERON:0004765,1.93e-09,22;UBERON:0001434,1.93e-09,22;UBERON:0002193,4.15e-09,48;UBERON:0002405,4.15e-09,48;UBERON:0001153,2.43e-07,1;UBERON:0001045,2.43e-07,1;UBERON:0000029,2.79e-07,1;UBERON:0001097,2.79e-07,1;UBERON:0003968,2.79e-07,1;UBERON:0001467,2.79e-07,1;UBERON:0003199,3.67e-07,1|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.934450562382103,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,0,4.73193248037357,1.7824876368746,3.81950686618227,0,0,0,4.95976510659561,1.60586496747019,0,0,0.861884930743556,1.52018735565099,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,2.34895648480831,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0.793351699990633,0,0,0,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.723245292907558,4.52373851817817,1.08781136763742,0.983528546038072,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr12:109915399..109915403,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:109915399..109915403,+ | |||
|description=CAGE_peak_at_chr12:109915399..109915403,+ | |||
|id=chr12:109915399..109915403,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.27e-16,6;CL:0000556,3.27e-16,6;CL:0000839,3.30e-16,13;CL:0000763,4.11e-13,16;CL:0002476,7.29e-13,2;CL:0002031,3.69e-11,25;CL:0000049,5.47e-11,19;CL:0000050,6.81e-11,9;CL:0000988,1.39e-08,32;CL:0002032,1.39e-08,32;CL:0000037,1.39e-08,32;CL:0000837,1.39e-08,32;CL:0000945,2.11e-07,1;CL:0000236,2.11e-07,1;CL:0000826,2.11e-07,1;CL:0002194,7.28e-07,4;CL:0000766,7.28e-07,4;CL:0000234,7.28e-07,4;CL:0000576,7.28e-07,4;CL:0000235,7.28e-07,4;CL:0000864,7.28e-07,4;CL:0002009,7.28e-07,4;CL:0000040,7.28e-07,4;CL:0000559,7.28e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.17e-09!59;UBERON:0000160!7.15e-09!43;UBERON:0000344!5.17e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.99e-19,3;UBERON:0001962,3.67e-13,2;UBERON:0001961,3.67e-13,2;UBERON:0001744,3.67e-13,2;UBERON:0002371,4.11e-13,16;UBERON:0001474,1.93e-09,22;UBERON:0004765,1.93e-09,22;UBERON:0001434,1.93e-09,22;UBERON:0002193,4.15e-09,48;UBERON:0002405,4.15e-09,48;UBERON:0001153,2.43e-07,1;UBERON:0001045,2.43e-07,1;UBERON:0000029,2.79e-07,1;UBERON:0001097,2.79e-07,1;UBERON:0003968,2.79e-07,1;UBERON:0001467,2.79e-07,1;UBERON:0003199,3.67e-07,1 | |||
|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.934450562382103,0,0,0,0,0,0.171200729931206,0,0.333109761815663,1.01237633694913,0,4.73193248037357,1.7824876368746,3.81950686618227,0,0,0,4.95976510659561,1.60586496747019,0,0,0.861884930743556,1.52018735565099,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,2.34895648480831,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0.793351699990633,0,0,0,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0,0,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.723245292907558,4.52373851817817,1.08781136763742,0.983528546038072,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr12:109915399..109915403,+ | |||
}} |
Latest revision as of 16:32, 4 August 2015
Short description: | p@chr12:109915399..109915403, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109915399..109915403, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.27e-16 | 6 |
megakaryocyte | 3.27e-16 | 6 |
myeloid lineage restricted progenitor cell | 3.30e-16 | 13 |
myeloid cell | 4.11e-13 | 16 |
bone marrow macrophage | 7.29e-13 | 2 |
hematopoietic lineage restricted progenitor cell | 3.69e-11 | 25 |
common myeloid progenitor | 5.47e-11 | 19 |
megakaryocyte-erythroid progenitor cell | 6.81e-11 | 9 |
hematopoietic cell | 1.39e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.39e-08 | 32 |
hematopoietic stem cell | 1.39e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.39e-08 | 32 |
lymphocyte of B lineage | 2.11e-07 | 1 |
B cell | 2.11e-07 | 1 |
pro-B cell | 2.11e-07 | 1 |
monopoietic cell | 7.28e-07 | 4 |
myeloid leukocyte | 7.28e-07 | 4 |
phagocyte | 7.28e-07 | 4 |
monocyte | 7.28e-07 | 4 |
macrophage | 7.28e-07 | 4 |
tissue-resident macrophage | 7.28e-07 | 4 |
macrophage dendritic cell progenitor | 7.28e-07 | 4 |
monoblast | 7.28e-07 | 4 |
promonocyte | 7.28e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.99e-19 | 3 |
gut-associated lymphoid tissue | 3.67e-13 | 2 |
mucosa-associated lymphoid tissue | 3.67e-13 | 2 |
lymphoid tissue | 3.67e-13 | 2 |
bone marrow | 4.11e-13 | 16 |
bone element | 1.93e-09 | 22 |
skeletal element | 1.93e-09 | 22 |
skeletal system | 1.93e-09 | 22 |
hemolymphoid system | 4.15e-09 | 48 |
immune system | 4.15e-09 | 48 |
caecum | 2.43e-07 | 1 |
midgut | 2.43e-07 | 1 |
lymph node | 2.79e-07 | 1 |
axillary lymph node | 2.79e-07 | 1 |
peripheral lymph node | 2.79e-07 | 1 |
shoulder | 2.79e-07 | 1 |
egg chamber | 3.67e-07 | 1 |