FFCP PHASE1:Mm9::chr12:109151709..109151720,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1318 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109151709..109151720,- | |||
|description=CAGE_peak_at_chr12:109151709..109151720,- | |description=CAGE_peak_at_chr12:109151709..109151720,- | ||
|id=chr12:109151709..109151720,- | |id=chr12:109151709..109151720,- | ||
|ontology_enrichment_celltype=CL:0000791!5.71e-08!9;CL:0000789!5.71e-08!9;CL:0002420!5.71e-08!9;CL:0002419!5.71e-08!9;CL:0000790!5.71e-08!9;CL:0002609!4.87e-07!6;CL:0000624!5.55e-07!8 | |ontology_enrichment_celltype=CL:0000791!5.71e-08!9;CL:0000789!5.71e-08!9;CL:0002420!5.71e-08!9;CL:0002419!5.71e-08!9;CL:0000790!5.71e-08!9;CL:0002609!4.87e-07!6;CL:0000624!5.55e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.26e-26,6;CL:0000117,3.10e-07,23;CL:0000337,3.10e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.58e-16!23;UBERON:0000974!1.58e-16!23;UBERON:0004807!1.58e-16!23;UBERON:0005058!1.58e-16!23;UBERON:0003351!1.58e-16!23;UBERON:0009113!1.58e-16!23;UBERON:0003295!1.58e-16!23;UBERON:0009722!1.58e-16!23;UBERON:0005562!1.58e-16!23;UBERON:0007690!1.58e-16!23;UBERON:0006562!1.33e-15!24;UBERON:0003408!1.33e-15!24;UBERON:0001557!1.33e-15!24;UBERON:0001042!1.33e-15!24;UBERON:0008814!1.33e-15!24;UBERON:0009145!1.33e-15!24;UBERON:0000153!1.51e-14!94;UBERON:0007811!8.50e-14!86;UBERON:0000072!2.97e-13!27;UBERON:0000064!3.96e-13!99;UBERON:0004177!5.77e-12!29;UBERON:0002020!1.08e-11!34;UBERON:0000956!1.36e-10!21;UBERON:0001869!1.36e-10!21;UBERON:0000203!1.36e-10!21;UBERON:0002791!3.47e-10!29;UBERON:0003528!3.47e-10!29;UBERON:0001893!3.47e-10!29;UBERON:0000063!5.12e-09!35;UBERON:0002780!3.46e-07!39;UBERON:0001890!3.46e-07!39;UBERON:0006240!3.46e-07!39;UBERON:0000065!5.63e-07!41;UBERON:0003080!6.84e-07!40 | |ontology_enrichment_uberon=UBERON:0002370!1.58e-16!23;UBERON:0000974!1.58e-16!23;UBERON:0004807!1.58e-16!23;UBERON:0005058!1.58e-16!23;UBERON:0003351!1.58e-16!23;UBERON:0009113!1.58e-16!23;UBERON:0003295!1.58e-16!23;UBERON:0009722!1.58e-16!23;UBERON:0005562!1.58e-16!23;UBERON:0007690!1.58e-16!23;UBERON:0006562!1.33e-15!24;UBERON:0003408!1.33e-15!24;UBERON:0001557!1.33e-15!24;UBERON:0001042!1.33e-15!24;UBERON:0008814!1.33e-15!24;UBERON:0009145!1.33e-15!24;UBERON:0000153!1.51e-14!94;UBERON:0007811!8.50e-14!86;UBERON:0000072!2.97e-13!27;UBERON:0000064!3.96e-13!99;UBERON:0004177!5.77e-12!29;UBERON:0002020!1.08e-11!34;UBERON:0000956!1.36e-10!21;UBERON:0001869!1.36e-10!21;UBERON:0000203!1.36e-10!21;UBERON:0002791!3.47e-10!29;UBERON:0003528!3.47e-10!29;UBERON:0001893!3.47e-10!29;UBERON:0000063!5.12e-09!35;UBERON:0002780!3.46e-07!39;UBERON:0001890!3.46e-07!39;UBERON:0006240!3.46e-07!39;UBERON:0000065!5.63e-07!41;UBERON:0003080!6.84e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.40e-08,29;UBERON:0002791,1.40e-08,29;UBERON:0001893,1.40e-08,29;UBERON:0000956,6.76e-08,21;UBERON:0001869,6.76e-08,21;UBERON:0000203,6.76e-08,21;UBERON:0002020,2.48e-07,34;UBERON:0002370,3.89e-07,23;UBERON:0000974,3.89e-07,23;UBERON:0004807,3.89e-07,23;UBERON:0005058,3.89e-07,23;UBERON:0003351,3.89e-07,23;UBERON:0009113,3.89e-07,23;UBERON:0003295,3.89e-07,23;UBERON:0009722,3.89e-07,23;UBERON:0005562,3.89e-07,23;UBERON:0007690,3.89e-07,23;UBERON:0006562,7.51e-07,24;UBERON:0003408,7.51e-07,24;UBERON:0001557,7.51e-07,24;UBERON:0001042,7.51e-07,24;UBERON:0008814,7.51e-07,24;UBERON:0009145,7.51e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.65903379693564,1.08004750665353,1.26194976810829,0,0,0.734944795289724,2.30029130443767,0,0,0,0,0,0.274462930807229,0,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.51968329191118,0.358053391334963,0.79472541912506,0.961563596159751,1.47689527174577,0.605798699688886,0.762068066549998,1.00826185136841,0.974578807397524,1.44317762460494,1.16876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.65903379693564,1.08004750665353,1.26194976810829,0,0,0.734944795289724,2.30029130443767,0,0,0,0,0,0.274462930807229,0,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.51968329191118,0.358053391334963,0.79472541912506,0.961563596159751,1.47689527174577,0.605798699688886,0.762068066549998,1.00826185136841,0.974578807397524,1.44317762460494,1.16876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr12:109151709..109151720,- | |short_description=p@chr12:109151709..109151720,- | ||
}} | }} |
Latest revision as of 16:00, 4 August 2015
Short description: | p@chr12:109151709..109151720, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109151709..109151720, - |
Coexpression cluster: | MCL_coexpression_mm9:1318 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.26e-26 | 6 |
CNS neuron (sensu Vertebrata) | 3.10e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.40e-08 | 29 |
regional part of telencephalon | 1.40e-08 | 29 |
telencephalon | 1.40e-08 | 29 |
cerebral cortex | 6.76e-08 | 21 |
cerebral hemisphere | 6.76e-08 | 21 |
pallium | 6.76e-08 | 21 |
gray matter | 2.48e-07 | 34 |
thymus | 3.89e-07 | 23 |
neck | 3.89e-07 | 23 |
respiratory system epithelium | 3.89e-07 | 23 |
hemolymphoid system gland | 3.89e-07 | 23 |
pharyngeal epithelium | 3.89e-07 | 23 |
thymic region | 3.89e-07 | 23 |
pharyngeal gland | 3.89e-07 | 23 |
entire pharyngeal arch endoderm | 3.89e-07 | 23 |
thymus primordium | 3.89e-07 | 23 |
early pharyngeal endoderm | 3.89e-07 | 23 |
pharynx | 7.51e-07 | 24 |
gland of gut | 7.51e-07 | 24 |
upper respiratory tract | 7.51e-07 | 24 |
chordate pharynx | 7.51e-07 | 24 |
pharyngeal arch system | 7.51e-07 | 24 |
pharyngeal region of foregut | 7.51e-07 | 24 |