FFCP PHASE1:Mm9::chr5:77780308..77780326,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=850 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:77780308..77780326,- | |||
|description=CAGE_peak_at_chr5:77780308..77780326,- | |description=CAGE_peak_at_chr5:77780308..77780326,- | ||
|id=chr5:77780308..77780326,- | |id=chr5:77780308..77780326,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.33e-10,7;CL:0002494,3.40e-10,3;CL:0000737,3.40e-10,3;CL:0000746,3.40e-10,3;CL:0000513,3.40e-10,3;CL:0000068,7.57e-10,3;CL:0002202,7.57e-10,3;CL:0000069,7.57e-10,3;CL:0002632,7.57e-10,3;CL:0002368,7.57e-10,3;CL:0000307,7.57e-10,3;CL:0000377,7.57e-10,3;CL:0000680,4.05e-08,6;CL:0000187,4.05e-08,6;CL:0000056,4.05e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!5.04e-09!66;UBERON:0002100!2.45e-08!98;UBERON:0005177!1.28e-07!85;UBERON:0003103!1.92e-07!43;UBERON:0000926!4.05e-07!193;UBERON:0004120!4.05e-07!193;UBERON:0006603!4.05e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.74e-17,66;UBERON:0002100,2.97e-17,90;UBERON:0005177,1.27e-13,79;UBERON:0003104,5.73e-11,61;UBERON:0009142,5.73e-11,61;UBERON:0003103,2.54e-10,43;UBERON:0003126,7.57e-10,3;UBERON:0001005,7.57e-10,3;UBERON:0007196,7.57e-10,3;UBERON:0001558,7.57e-10,3;UBERON:0005178,2.24e-09,17;UBERON:0005181,2.24e-09,17;UBERON:0002224,2.24e-09,17;UBERON:0000915,2.24e-09,17;UBERON:0008947,2.24e-09,17;UBERON:0003258,2.24e-09,17;UBERON:0005172,2.32e-09,49;UBERON:0005173,2.32e-09,49;UBERON:0002417,2.32e-09,49;UBERON:0000916,2.32e-09,49;UBERON:0002113,7.75e-09,14;UBERON:0003918,7.75e-09,14;UBERON:0011143,7.75e-09,14;UBERON:0005095,7.75e-09,14;UBERON:0007687,7.75e-09,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,2.34717403304412,0.218025156380447,0,0.58328969722285,0.419959264876088,0,0,0,0,11.3194151855817,14.3266719969378,17.0171790451556,0,0,0,0,0,1.7997994345628,2.96659908770092,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0.255374676170375,0,0,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0.0755715601067855,2.02905142091174,4.30211938490693,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,0.70667914902068,0,0,0,0,4.76280290224671,4.30711771307668,8.59391556525132,0.45673551887624,0,1.33597925158342,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,1.17588707135705,1.63366568728578,0.247194967734374,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0,0.820837320395476,0.486412857275134,0.730999937126662,1.75640092232841,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.994782360205754,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.571242563048644,0,1.22190796707189,1.16371492300575,1.19230893813542,2.27651533647326,6.4948465111025,4.23896565171712,3.08492909804501,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,0,0,0,0,0.167506257441816,0.714130922658041,0.975668239288994,0.315270288212382,1.10732344824387,1.2756381492599,1.63863314715738,2.76295970985433,1.44649058581512,0,0,0,0.551873492609465,0,0.234423373184406,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.35613120733451,0.81443479676788,1.31976098378028,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0.683483523191411,0,0.185194527369712,1.13021074202815,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.209088296014469,0,0.809186078308924,0.41326727862668,0.26175594198403,0.388844919875379,0.621339313086926,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,0.337912250981556,0.352071715937262,0.5208175393758,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0,0.15241361331,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0.772758376128762,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,1.10128051297009,2.34717403304412,0.218025156380447,0,0.58328969722285,0.419959264876088,0,0,0,0,11.3194151855817,14.3266719969378,17.0171790451556,0,0,0,0,0,1.7997994345628,2.96659908770092,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0.255374676170375,0,0,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0.0755715601067855,2.02905142091174,4.30211938490693,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,0.70667914902068,0,0,0,0,4.76280290224671,4.30711771307668,8.59391556525132,0.45673551887624,0,1.33597925158342,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,1.17588707135705,1.63366568728578,0.247194967734374,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0,0.820837320395476,0.486412857275134,0.730999937126662,1.75640092232841,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.994782360205754,0.19496408711912,0,0.648414149624083,0.398282546508734,0,0.571242563048644,0,1.22190796707189,1.16371492300575,1.19230893813542,2.27651533647326,6.4948465111025,4.23896565171712,3.08492909804501,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,0,0,0,0,0.167506257441816,0.714130922658041,0.975668239288994,0.315270288212382,1.10732344824387,1.2756381492599,1.63863314715738,2.76295970985433,1.44649058581512,0,0,0,0.551873492609465,0,0.234423373184406,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0.283880170416537,0.35613120733451,0.81443479676788,1.31976098378028,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0.23467170806371,0.847328283455281,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0.683483523191411,0,0.185194527369712,1.13021074202815,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,0.209088296014469,0,0.809186078308924,0.41326727862668,0.26175594198403,0.388844919875379,0.621339313086926,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,0.337912250981556,0.352071715937262,0.5208175393758,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0,0.15241361331,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0.772758376128762,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr5:77780308..77780326,- | |short_description=p@chr5:77780308..77780326,- | ||
}} | }} |
Latest revision as of 15:22, 4 August 2015
Short description: | p@chr5:77780308..77780326, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77780308..77780326, - |
Coexpression cluster: | MCL_coexpression_mm9:850 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.33e-10 | 7 |
cardiocyte | 3.40e-10 | 3 |
striated muscle cell | 3.40e-10 | 3 |
cardiac muscle cell | 3.40e-10 | 3 |
cardiac muscle myoblast | 3.40e-10 | 3 |
duct epithelial cell | 7.57e-10 | 3 |
epithelial cell of tracheobronchial tree | 7.57e-10 | 3 |
branched duct epithelial cell | 7.57e-10 | 3 |
epithelial cell of lower respiratory tract | 7.57e-10 | 3 |
respiratory epithelial cell | 7.57e-10 | 3 |
tracheal epithelial cell | 7.57e-10 | 3 |
tracheoblast | 7.57e-10 | 3 |
muscle precursor cell | 4.05e-08 | 6 |
muscle cell | 4.05e-08 | 6 |
myoblast | 4.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 2.74e-17 | 66 |
trunk | 2.97e-17 | 90 |
trunk region element | 1.27e-13 | 79 |
mesenchyme | 5.73e-11 | 61 |
entire embryonic mesenchyme | 5.73e-11 | 61 |
compound organ | 2.54e-10 | 43 |
trachea | 7.57e-10 | 3 |
respiratory airway | 7.57e-10 | 3 |
tracheobronchial tree | 7.57e-10 | 3 |
lower respiratory tract | 7.57e-10 | 3 |
thoracic cavity element | 2.24e-09 | 17 |
thoracic segment organ | 2.24e-09 | 17 |
thoracic cavity | 2.24e-09 | 17 |
thoracic segment of trunk | 2.24e-09 | 17 |
respiratory primordium | 2.24e-09 | 17 |
endoderm of foregut | 2.24e-09 | 17 |
abdomen element | 2.32e-09 | 49 |
abdominal segment element | 2.32e-09 | 49 |
abdominal segment of trunk | 2.32e-09 | 49 |
abdomen | 2.32e-09 | 49 |
kidney | 7.75e-09 | 14 |
kidney mesenchyme | 7.75e-09 | 14 |
upper urinary tract | 7.75e-09 | 14 |
kidney rudiment | 7.75e-09 | 14 |
kidney field | 7.75e-09 | 14 |