FFCP PHASE1:Mm9::chr5:67359771..67359785,+: Difference between revisions
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{{FFCP|EntrezGene=77569|HGNC=|MCL_coexpression_id=1027|UniProt=Q8CGB7|association_with_transcript=-19bp_to_ENSMUST00000140428,uc008xpk.1_5end|description=CAGE_peak_9_at_Limch1_5end|id=chr5:67359771..67359785,+|ontology_enrichment_celltype=CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!5.66e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,3.13e-11,9;CL:0000540,5.20e-07,33;CL:0000047,5.20e-07,33;CL:0000031,5.20e-07,33;CL:0000404,5.20e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.06e-17!102;UBERON:0000924!4.06e-17!102;UBERON:0006601!4.06e-17!102;UBERON:0000073!4.25e-15!75;UBERON:0001016!4.25e-15!75;UBERON:0000033!1.84e-14!63;UBERON:0001017!4.25e-14!73;UBERON:0005743!4.25e-14!73;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0003056!2.32e-11!49;UBERON:0001049!2.08e-10!52;UBERON:0005068!2.08e-10!52;UBERON:0006241!2.08e-10!52;UBERON:0007135!2.08e-10!52;UBERON:0000955!3.11e-10!50;UBERON:0006238!3.11e-10!50;UBERON:0002616!1.28e-09!49;UBERON:0002020!2.75e-09!34;UBERON:0002791!8.54e-09!29;UBERON:0003528!8.54e-09!29;UBERON:0001893!8.54e-09!29;UBERON:0003080!8.67e-08!40;UBERON:0007811!1.26e-07!86;UBERON:0000153!2.34e-07!94;UBERON:0002780!2.82e-07!39;UBERON:0001890!2.82e-07!39;UBERON:0006240!2.82e-07!39;UBERON:0000956!5.44e-07!21;UBERON:0001869!5.44e-07!21;UBERON:0000203!5.44e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-26,95;UBERON:0000924,1.65e-26,95;UBERON:0006601,1.65e-26,95;UBERON:0002346,5.67e-23,64;UBERON:0003075,5.67e-23,64;UBERON:0007284,5.67e-23,64;UBERON:0010371,4.98e-21,73;UBERON:0001016,2.19e-20,75;UBERON:0001017,1.88e-19,73;UBERON:0003056,1.10e-15,49;UBERON:0010314,3.86e-15,92;UBERON:0000955,3.14e-13,47;UBERON:0006238,3.14e-13,47;UBERON:0001049,1.07e-12,52;UBERON:0005068,1.07e-12,52;UBERON:0006241,1.07e-12,52;UBERON:0007135,1.07e-12,52;UBERON:0000073,6.04e-12,54;UBERON:0002616,6.49e-12,46;UBERON:0000010,1.00e-11,11;UBERON:0002410,3.13e-11,9;UBERON:0000970,1.18e-10,9;UBERON:0000019,1.18e-10,9;UBERON:0000047,1.18e-10,9;UBERON:0010312,1.18e-10,9;UBERON:0004088,1.18e-10,9;UBERON:0002104,1.18e-10,9;UBERON:0001456,1.18e-10,9;UBERON:0003072,1.18e-10,9;UBERON:0004128,1.18e-10,9;UBERON:0003071,1.18e-10,9;UBERON:0000020,2.73e-10,12;UBERON:0001032,2.73e-10,12;UBERON:0004456,2.73e-10,12;UBERON:0000033,2.18e-09,13;UBERON:0005085,2.18e-09,13;UBERON:0002021,2.50e-09,10;UBERON:0000411,2.50e-09,10;UBERON:0001950,2.50e-09,10;UBERON:0001444,1.62e-08,11;UBERON:0003080,1.65e-08,40;UBERON:0003528,4.19e-08,29;UBERON:0002791,4.19e-08,29;UBERON:0001893,4.19e-08,29;UBERON:0000956,4.39e-08,21;UBERON:0001869,4.39e-08,21;UBERON:0000203,4.39e-08,21;UBERON:0002020,1.12e-07,34;UBERON:0002780,1.64e-07,39;UBERON:0001890,1.64e-07,39;UBERON:0006240,1.64e-07,39;UBERON:0000013,1.75e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,1.89292465216244,0.856952953211411,0.441737081903227,0.489963196859816,0.383381884072945,0,0,1.53224805702225,0.921639199537461,0.527545150920775,0.731901148819277,0,0.558365998002762,2.8138130501584,1.98637722109853,0,0.284743361598206,1.1183966749518,1.81742863999642,0.604572480854284,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.970601099684455,1.54589062922275,0.969750506270444,0,1.17112318804619,2.51336048176146,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,1.56441888173049,0.511430914660661,1.45451631191692,1.29793010454206,0.407357455401265,0.497627882440372,0,1.26265113531884,1.04096354370163,0,0.720248519221397,2.10986744970001,1.90502197623718,1.7935920839879,1.59292931751539,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0,0.938760993154008,0.502518772325447,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,1.12385412991454,1.17211686592203,0,1.00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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77569 | |||
|HGNC= | |||
|MCL_coexpression_id=1027 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CGB7 | |||
|association_with_transcript=-19bp_to_ENSMUST00000140428,uc008xpk.1_5end | |||
|cluster_id=chr5:67359771..67359785,+ | |||
|description=CAGE_peak_9_at_Limch1_5end | |||
|id=chr5:67359771..67359785,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.20e-08!33;CL:0000047!2.20e-08!33;CL:0000031!2.20e-08!33;CL:0000404!2.20e-08!33;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!5.66e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.13e-11,9;CL:0000540,5.20e-07,33;CL:0000047,5.20e-07,33;CL:0000031,5.20e-07,33;CL:0000404,5.20e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.06e-17!102;UBERON:0000924!4.06e-17!102;UBERON:0006601!4.06e-17!102;UBERON:0000073!4.25e-15!75;UBERON:0001016!4.25e-15!75;UBERON:0000033!1.84e-14!63;UBERON:0001017!4.25e-14!73;UBERON:0005743!4.25e-14!73;UBERON:0002346!2.39e-13!71;UBERON:0003075!2.39e-13!71;UBERON:0007284!2.39e-13!71;UBERON:0003056!2.32e-11!49;UBERON:0001049!2.08e-10!52;UBERON:0005068!2.08e-10!52;UBERON:0006241!2.08e-10!52;UBERON:0007135!2.08e-10!52;UBERON:0000955!3.11e-10!50;UBERON:0006238!3.11e-10!50;UBERON:0002616!1.28e-09!49;UBERON:0002020!2.75e-09!34;UBERON:0002791!8.54e-09!29;UBERON:0003528!8.54e-09!29;UBERON:0001893!8.54e-09!29;UBERON:0003080!8.67e-08!40;UBERON:0007811!1.26e-07!86;UBERON:0000153!2.34e-07!94;UBERON:0002780!2.82e-07!39;UBERON:0001890!2.82e-07!39;UBERON:0006240!2.82e-07!39;UBERON:0000956!5.44e-07!21;UBERON:0001869!5.44e-07!21;UBERON:0000203!5.44e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-26,95;UBERON:0000924,1.65e-26,95;UBERON:0006601,1.65e-26,95;UBERON:0002346,5.67e-23,64;UBERON:0003075,5.67e-23,64;UBERON:0007284,5.67e-23,64;UBERON:0010371,4.98e-21,73;UBERON:0001016,2.19e-20,75;UBERON:0001017,1.88e-19,73;UBERON:0003056,1.10e-15,49;UBERON:0010314,3.86e-15,92;UBERON:0000955,3.14e-13,47;UBERON:0006238,3.14e-13,47;UBERON:0001049,1.07e-12,52;UBERON:0005068,1.07e-12,52;UBERON:0006241,1.07e-12,52;UBERON:0007135,1.07e-12,52;UBERON:0000073,6.04e-12,54;UBERON:0002616,6.49e-12,46;UBERON:0000010,1.00e-11,11;UBERON:0002410,3.13e-11,9;UBERON:0000970,1.18e-10,9;UBERON:0000019,1.18e-10,9;UBERON:0000047,1.18e-10,9;UBERON:0010312,1.18e-10,9;UBERON:0004088,1.18e-10,9;UBERON:0002104,1.18e-10,9;UBERON:0001456,1.18e-10,9;UBERON:0003072,1.18e-10,9;UBERON:0004128,1.18e-10,9;UBERON:0003071,1.18e-10,9;UBERON:0000020,2.73e-10,12;UBERON:0001032,2.73e-10,12;UBERON:0004456,2.73e-10,12;UBERON:0000033,2.18e-09,13;UBERON:0005085,2.18e-09,13;UBERON:0002021,2.50e-09,10;UBERON:0000411,2.50e-09,10;UBERON:0001950,2.50e-09,10;UBERON:0001444,1.62e-08,11;UBERON:0003080,1.65e-08,40;UBERON:0003528,4.19e-08,29;UBERON:0002791,4.19e-08,29;UBERON:0001893,4.19e-08,29;UBERON:0000956,4.39e-08,21;UBERON:0001869,4.39e-08,21;UBERON:0000203,4.39e-08,21;UBERON:0002020,1.12e-07,34;UBERON:0002780,1.64e-07,39;UBERON:0001890,1.64e-07,39;UBERON:0006240,1.64e-07,39;UBERON:0000013,1.75e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,1.89292465216244,0.856952953211411,0.441737081903227,0.489963196859816,0.383381884072945,0,0,1.53224805702225,0.921639199537461,0.527545150920775,0.731901148819277,0,0.558365998002762,2.8138130501584,1.98637722109853,0,0.284743361598206,1.1183966749518,1.81742863999642,0.604572480854284,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,2.67602497575693,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.970601099684455,1.54589062922275,0.969750506270444,0,1.17112318804619,2.51336048176146,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,1.56441888173049,0.511430914660661,1.45451631191692,1.29793010454206,0.407357455401265,0.497627882440372,0,1.26265113531884,1.04096354370163,0,0.720248519221397,2.10986744970001,1.90502197623718,1.7935920839879,1.59292931751539,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0.493679549740441,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0,0.938760993154008,0.502518772325447,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.433947175744535,0,0,0,0,1.12385412991454,1.17211686592203,0,1.00988370881749,0,2.34263246577983,2.15423397732799,1.19484398976276,1.33679204449436,0.849229592366497,2.83367491172426,1.75353514746787,1.58115111178609,4.4984984299053,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0.322928853391811,0.180938774784468,0.477489376012546,0.328281799490123,0,2.03967832211561,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0.405450430580328,0.821687657318618,0.389762468933385,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0.501572104035363,2.25900737046827,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,2.2661816921691,0,0.45032120322422,1.35942722695261,1.03552062350364,0.93408612825759,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.512201219238954,0.976402972245426,0,0.463537303779422,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,1.43061713968393,0.581385666529314,0.470546902076653,0.761531471025089,0.548783918618318,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,1.14772999241306,0.882365676478062,0.463735671240843 | |||
|short_description=p9@Limch1 | |||
}} |
Revision as of 13:30, 4 August 2015
Short description: | p9@Limch1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Limch1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1027 |
Association with transcript: | -19bp_to_ENSMUST00000140428, uc008xpk.1_5end |
EntrezGene: | 77569 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.13e-11 | 9 |
neuron | 5.20e-07 | 33 |
neuronal stem cell | 5.20e-07 | 33 |
neuroblast | 5.20e-07 | 33 |
electrically signaling cell | 5.20e-07 | 33 |