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FFCP PHASE1:Mm9::chr4:108551735..108551746,+: Difference between revisions

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{{FFCP|EntrezGene=69908|HGNC=|MCL_coexpression_id=3447|UniProt=A2A7Z6|association_with_transcript=-58bp_to_ENSMUST00000106651_5end|description=CAGE_peak_2_at_Rab3b_5end|id=chr4:108551735..108551746,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.52e-23!71;UBERON:0003075!3.52e-23!71;UBERON:0007284!3.52e-23!71;UBERON:0004121!3.91e-20!102;UBERON:0000924!3.91e-20!102;UBERON:0006601!3.91e-20!102;UBERON:0001017!6.34e-17!73;UBERON:0005743!6.34e-17!73;UBERON:0001049!7.59e-17!52;UBERON:0005068!7.59e-17!52;UBERON:0006241!7.59e-17!52;UBERON:0007135!7.59e-17!52;UBERON:0000073!3.64e-16!75;UBERON:0001016!3.64e-16!75;UBERON:0000033!4.86e-16!63;UBERON:0003056!1.05e-15!49;UBERON:0000955!4.18e-14!50;UBERON:0006238!4.18e-14!50;UBERON:0002616!1.89e-13!49;UBERON:0003080!3.53e-13!40;UBERON:0002780!1.02e-12!39;UBERON:0001890!1.02e-12!39;UBERON:0006240!1.02e-12!39;UBERON:0002020!2.10e-09!34;UBERON:0000468!1.24e-08!333;UBERON:0001894!1.70e-07!10;UBERON:0006222!1.70e-07!10;UBERON:0002021!1.84e-07!10;UBERON:0000411!1.84e-07!10;UBERON:0001950!1.84e-07!10;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.20e-22,64;UBERON:0003075,4.20e-22,64;UBERON:0007284,4.20e-22,64;UBERON:0001049,1.72e-20,52;UBERON:0005068,1.72e-20,52;UBERON:0006241,1.72e-20,52;UBERON:0007135,1.72e-20,52;UBERON:0010314,5.04e-20,92;UBERON:0000073,1.05e-19,54;UBERON:0010371,1.99e-19,73;UBERON:0001017,1.06e-18,73;UBERON:0003056,1.77e-18,49;UBERON:0001016,1.38e-17,75;UBERON:0000955,1.51e-17,47;UBERON:0006238,1.51e-17,47;UBERON:0004121,7.49e-17,95;UBERON:0000924,7.49e-17,95;UBERON:0006601,7.49e-17,95;UBERON:0002616,1.01e-16,46;UBERON:0003080,1.30e-15,40;UBERON:0002780,4.79e-15,39;UBERON:0001890,4.79e-15,39;UBERON:0006240,4.79e-15,39;UBERON:0002020,5.37e-11,34;UBERON:0001894,7.26e-09,10;UBERON:0006222,7.26e-09,10;UBERON:0002021,7.97e-09,10;UBERON:0000411,7.97e-09,10;UBERON:0001950,7.97e-09,10;UBERON:0003528,2.66e-08,29;UBERON:0002791,2.66e-08,29;UBERON:0001893,2.66e-08,29;UBERON:0000007,1.84e-07,8;UBERON:0003296,1.84e-07,8;UBERON:0010133,1.84e-07,8|phase1_expression=9.28863313207805,0,0,0,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,1.27564935226605,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0,0.979904951377538,0,0,0,0,0,0,0,2.42779753031517,6.87688273053643,7.60597684207415,0.677689064138264,0,0.899899717281399,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,0.311068836925433,0.405017814995072,0.210324961351382,10.2834354385369,7.28866185140325,0.857435594504678,0.575072826109418,0,0,1.78762273319263,2.30409799884365,2.76961204233407,5.03182039813253,4.16730696445408,6.14202597803038,5.06486349028512,6.1119299110724,6.77645746589436,9.96601765593721,3.72798891650601,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,3.66192891419369,0,0,0,0.216491041011214,0,0,0.91347103775248,0,17.9614988268438,7.80683970447611,21.9215144384742,11.761390360059,16.8809357418937,13.1699351991989,6.28332956648377,0.494389935468748,0.144599356919912,0,0.485300549842228,0,0,0,1.75668478206928,1.8850203613211,0.510914110417183,0,0,0,5.09288173976397,16.4700217014706,4.90051973240171,21.38039138365,16.8772201838018,14.3373750746096,12.6548185192851,0.712875546952214,0.373220911830279,0.758168275301024,0.420883711772948,3.12289063110489,2.5289231487682,4.32149111532838,2.86339153887859,3.74200745332303,3.20284300712124,3.27956035959051,2.58703370739016,0.862271971731369,0.945530400839096,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,2.67516777330327,2.38841120182192,0,0,0,1.03562886267751,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.405344047729279,1.46199987425332,1.3173006917463,2.14730270016595,16.4026159880019,3.60166143327496,0,0.793351699990633,1.06644125267617,0.928946687441754,0.515469845288373,0.403367049246685,0.22237804384487,0.951128130562796,1.42358718463353,1.64698954724011,1.50801125280162,0.795825888164603,0.779856348476481,0,0.216138049874694,0.995706366271836,0.379335801906163,2.28497025219458,2.25415471346161,2.8511185898344,2.71533482034676,1.96380295692892,3.35153646758564,1.62371162777562,1.255989822731,1.48076596706161,0.592905254174298,0.166845105716094,0.786235980452812,0.224862112384854,1.21716072833102,0,0.50925170356284,0,0.648540907100142,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,0.538192240565737,0,0.184753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.3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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:69908
|HGNC=
|MCL_coexpression_id=3447
|TSSclassifier=NA
|UniProt=uniprot:A2A7Z6
|association_with_transcript=-58bp_to_ENSMUST00000106651_5end
|cluster_id=chr4:108551735..108551746,+
|description=CAGE_peak_2_at_Rab3b_5end
|id=chr4:108551735..108551746,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.52e-23!71;UBERON:0003075!3.52e-23!71;UBERON:0007284!3.52e-23!71;UBERON:0004121!3.91e-20!102;UBERON:0000924!3.91e-20!102;UBERON:0006601!3.91e-20!102;UBERON:0001017!6.34e-17!73;UBERON:0005743!6.34e-17!73;UBERON:0001049!7.59e-17!52;UBERON:0005068!7.59e-17!52;UBERON:0006241!7.59e-17!52;UBERON:0007135!7.59e-17!52;UBERON:0000073!3.64e-16!75;UBERON:0001016!3.64e-16!75;UBERON:0000033!4.86e-16!63;UBERON:0003056!1.05e-15!49;UBERON:0000955!4.18e-14!50;UBERON:0006238!4.18e-14!50;UBERON:0002616!1.89e-13!49;UBERON:0003080!3.53e-13!40;UBERON:0002780!1.02e-12!39;UBERON:0001890!1.02e-12!39;UBERON:0006240!1.02e-12!39;UBERON:0002020!2.10e-09!34;UBERON:0000468!1.24e-08!333;UBERON:0001894!1.70e-07!10;UBERON:0006222!1.70e-07!10;UBERON:0002021!1.84e-07!10;UBERON:0000411!1.84e-07!10;UBERON:0001950!1.84e-07!10;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.20e-22,64;UBERON:0003075,4.20e-22,64;UBERON:0007284,4.20e-22,64;UBERON:0001049,1.72e-20,52;UBERON:0005068,1.72e-20,52;UBERON:0006241,1.72e-20,52;UBERON:0007135,1.72e-20,52;UBERON:0010314,5.04e-20,92;UBERON:0000073,1.05e-19,54;UBERON:0010371,1.99e-19,73;UBERON:0001017,1.06e-18,73;UBERON:0003056,1.77e-18,49;UBERON:0001016,1.38e-17,75;UBERON:0000955,1.51e-17,47;UBERON:0006238,1.51e-17,47;UBERON:0004121,7.49e-17,95;UBERON:0000924,7.49e-17,95;UBERON:0006601,7.49e-17,95;UBERON:0002616,1.01e-16,46;UBERON:0003080,1.30e-15,40;UBERON:0002780,4.79e-15,39;UBERON:0001890,4.79e-15,39;UBERON:0006240,4.79e-15,39;UBERON:0002020,5.37e-11,34;UBERON:0001894,7.26e-09,10;UBERON:0006222,7.26e-09,10;UBERON:0002021,7.97e-09,10;UBERON:0000411,7.97e-09,10;UBERON:0001950,7.97e-09,10;UBERON:0003528,2.66e-08,29;UBERON:0002791,2.66e-08,29;UBERON:0001893,2.66e-08,29;UBERON:0000007,1.84e-07,8;UBERON:0003296,1.84e-07,8;UBERON:0010133,1.84e-07,8
|phase1_expression=9.28863313207805,0,0,0,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,1.27564935226605,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0,0.979904951377538,0,0,0,0,0,0,0,2.42779753031517,6.87688273053643,7.60597684207415,0.677689064138264,0,0.899899717281399,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,0.311068836925433,0.405017814995072,0.210324961351382,10.2834354385369,7.28866185140325,0.857435594504678,0.575072826109418,0,0,1.78762273319263,2.30409799884365,2.76961204233407,5.03182039813253,4.16730696445408,6.14202597803038,5.06486349028512,6.1119299110724,6.77645746589436,9.96601765593721,3.72798891650601,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,3.66192891419369,0,0,0,0.216491041011214,0,0,0.91347103775248,0,17.9614988268438,7.80683970447611,21.9215144384742,11.761390360059,16.8809357418937,13.1699351991989,6.28332956648377,0.494389935468748,0.144599356919912,0,0.485300549842228,0,0,0,1.75668478206928,1.8850203613211,0.510914110417183,0,0,0,5.09288173976397,16.4700217014706,4.90051973240171,21.38039138365,16.8772201838018,14.3373750746096,12.6548185192851,0.712875546952214,0.373220911830279,0.758168275301024,0.420883711772948,3.12289063110489,2.5289231487682,4.32149111532838,2.86339153887859,3.74200745332303,3.20284300712124,3.27956035959051,2.58703370739016,0.862271971731369,0.945530400839096,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,2.67516777330327,2.38841120182192,0,0,0,1.03562886267751,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0.405344047729279,1.46199987425332,1.3173006917463,2.14730270016595,16.4026159880019,3.60166143327496,0,0.793351699990633,1.06644125267617,0.928946687441754,0.515469845288373,0.403367049246685,0.22237804384487,0.951128130562796,1.42358718463353,1.64698954724011,1.50801125280162,0.795825888164603,0.779856348476481,0,0.216138049874694,0.995706366271836,0.379335801906163,2.28497025219458,2.25415471346161,2.8511185898344,2.71533482034676,1.96380295692892,3.35153646758564,1.62371162777562,1.255989822731,1.48076596706161,0.592905254174298,0.166845105716094,0.786235980452812,0.224862112384854,1.21716072833102,0,0.50925170356284,0,0.648540907100142,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,0.538192240565737,0,0.184753190166605,1.13694847062291,0.488894929326078,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0,0.478364305972461,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,0,7.86697890940181,8.90808818100744,0,0.252470927204373,0.315508219416257,1.17131623288992,0.646270193198397,1.19484398976276,1.55959071857676,0.849229592366497,1.21443210502468,0.292255857911312,0.790575555893047,45.9489482483184,0.141940085208269,0.890328018336276,0.488660878060728,0,0,1.94224508923985,0.906970670894253,0.943025398779491,0.885905678642318,0.614870295887855,0.775284879504663,1.09060118843252,2.13898427030833,1.26414703174326,0,0,27.235168460303,3.96134406868882,14.1000965323202,18.0043109426538,17.5566831305851,18.9070946658195,14.4803138129866,28.6197052167723,0.469343416127421,1.69465656691056,1.54369878638473,0.65954501176592,1.13025098687134,0.72375509913787,0.716234064018819,0.164140899745061,0.874442509889552,10.0129663085675,0.170870880797853,0.412773735926445,0.555583582109135,0.188368457004691,0,0,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,0.648032044930808,0.836353184057875,0.87345025498471,1.75323650300267,1.40510874733071,1.04702376793612,0.777689839750757,0,3.94585057078933,4.33597983527538,4.96375471371293,3.50012139019286,4.39143399824286,4.05494701177868,1.76035857968631,1.3020438484395,2.9360616439199,1.20792060413003,1.44015003128933,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0.443971906748129,0.358855426437903,0.167884616364078,0.965947970160952,0,0.183151624267265,0.857473516316263,0,19.2015626489803,19.3336599333014,20.0513429703789,22.3409137046794,8.90607275701835,10.5755145634558,13.5004500046361,11.7083512838297,14.9536994964788,11.39072685854,1.24544817101012,0,0.853668028770671,1.70174701947806,2.51535795153579,1.2869045591501,1.33348036680969,2.88449080134452,1.92551525755089,3.28506375292937,1.77435509923168,1.50901073108861,1.87283014939765,1.40855335290712,1.55075766180156,0.952587382566147,1.39061191133827,1.92909220463705,0.412085900803307,1.17759136107518,2.05721551431249,1.59728225543404,1.66905332963125,1.88950341622027,1.69396884747595,1.69229215783353,2.74391959309159,1.8414879800649,1.08643291076689,1.68342681497322,2.13543032623513,1.18205378850676,1.22769312950907,1.39443157067369,1.54325288784913,6.24526444844865,2.57324769289949,2.14871054048298,2.86932498103265,1.10295709559758,1.85494268496337
|short_description=p2@Rab3b
}}

Revision as of 12:54, 4 August 2015

Short description:p2@Rab3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab3b_5end
Coexpression cluster:MCL_coexpression_mm9:3447
Association with transcript: -58bp_to_ENSMUST00000106651_5end
EntrezGene:69908
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F516.88
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D521.38
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B212.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I945.95
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G827.24
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C714.10
pituitary gland, embryo E14.CNhs11037.398-44A518.00
pituitary gland, embryo E15.CNhs10592.427-16B917.56
pituitary gland, embryo E16.CNhs11036.449-43F618.91
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E928.62
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.20e-2264
neural plate4.20e-2264
presumptive neural plate4.20e-2264
neural tube1.72e-2052
neural rod1.72e-2052
future spinal cord1.72e-2052
neural keel1.72e-2052
structure with developmental contribution from neural crest5.04e-2092
regional part of nervous system1.05e-1954
ecto-epithelium1.99e-1973
central nervous system1.06e-1873
pre-chordal neural plate1.77e-1849
nervous system1.38e-1775
brain1.51e-1747
future brain1.51e-1747
ectoderm-derived structure7.49e-1795
ectoderm7.49e-1795
presumptive ectoderm7.49e-1795
regional part of brain1.01e-1646
anterior neural tube1.30e-1540
regional part of forebrain4.79e-1539
forebrain4.79e-1539
future forebrain4.79e-1539
gray matter5.37e-1134
diencephalon7.26e-0910
future diencephalon7.26e-0910
occipital lobe7.97e-0910
visual cortex7.97e-0910
neocortex7.97e-0910
brain grey matter2.66e-0829
regional part of telencephalon2.66e-0829
telencephalon2.66e-0829
pituitary gland1.84e-078
gland of diencephalon1.84e-078
neuroendocrine gland1.84e-078
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