FFCP PHASE1:Mm9::chr10:57505332..57505353,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1518|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:57505332..57505353,+|id=chr10:57505332..57505353,+|ontology_enrichment_celltype=CL:0000221!9.53e-32!44;CL:0000133!9.53e-32!44;CL:0002319!1.57e-30!43;CL:0000540!4.01e-25!33;CL:0000047!4.01e-25!33;CL:0000031!4.01e-25!33;CL:0000404!4.01e-25!33;CL:0000055!2.50e-24!50;CL:0000393!1.40e-19!39;CL:0000211!1.40e-19!39;CL:0000117!9.04e-19!23;CL:0000337!9.04e-19!23;CL:0002321!7.05e-15!70;CL:0000220!7.05e-15!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.37e-24,44;CL:0000133,1.37e-24,44;CL:0002319,3.20e-22,43;CL:0000117,1.08e-21,23;CL:0000337,1.08e-21,23;CL:0000540,9.01e-20,33;CL:0000047,9.01e-20,33;CL:0000031,9.01e-20,33;CL:0000404,9.01e-20,33;CL:0000393,2.47e-16,39;CL:0000211,2.47e-16,39;CL:0002321,3.05e-14,70;CL:0002612,8.08e-13,3;CL:0002611,4.39e-09,2;CL:0002605,1.78e-08,2;CL:0002604,1.78e-08,2;CL:0000197,2.31e-08,2;CL:0002491,2.31e-08,2;CL:0000098,2.31e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.38e-32!73;UBERON:0005743!9.38e-32!73;UBERON:0000073!9.83e-32!75;UBERON:0001016!9.83e-32!75;UBERON:0004121!2.28e-26!102;UBERON:0000924!2.28e-26!102;UBERON:0006601!2.28e-26!102;UBERON:0002020!5.47e-24!34;UBERON:0001049!6.27e-19!52;UBERON:0005068!6.27e-19!52;UBERON:0006241!6.27e-19!52;UBERON:0007135!6.27e-19!52;UBERON:0002346!1.46e-18!71;UBERON:0003075!1.46e-18!71;UBERON:0007284!1.46e-18!71;UBERON:0002791!3.43e-18!29;UBERON:0003528!3.43e-18!29;UBERON:0001893!3.43e-18!29;UBERON:0000033!5.45e-17!63;UBERON:0000955!4.66e-16!50;UBERON:0006238!4.66e-16!50;UBERON:0002616!3.36e-15!49;UBERON:0003056!6.70e-13!49;UBERON:0003080!8.02e-13!40;UBERON:0000956!1.28e-12!21;UBERON:0001869!1.28e-12!21;UBERON:0000203!1.28e-12!21;UBERON:0002780!2.14e-12!39;UBERON:0001890!2.14e-12!39;UBERON:0006240!2.14e-12!39;UBERON:0002619!1.88e-09!17;UBERON:0007811!3.54e-09!86;UBERON:0000153!5.30e-08!94;UBERON:0001948!2.12e-07!5;UBERON:0002315!2.12e-07!5;UBERON:0003076!4.19e-07!12;UBERON:0003057!4.19e-07!12;UBERON:0002420!7.91e-07!8;UBERON:0007245!7.91e-07!8;UBERON:0010009!7.91e-07!8;UBERON:0010011!7.91e-07!8;UBERON:0000454!7.91e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.37e-29,34;UBERON:0001017,1.97e-21,73;UBERON:0001016,9.19e-21,75;UBERON:0001049,1.01e-20,52;UBERON:0005068,1.01e-20,52;UBERON:0006241,1.01e-20,52;UBERON:0007135,1.01e-20,52;UBERON:0001948,3.02e-20,5;UBERON:0002315,3.02e-20,5;UBERON:0000073,7.85e-20,54;UBERON:0010371,1.70e-19,73;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002346,3.35e-18,64;UBERON:0003075,3.35e-18,64;UBERON:0007284,3.35e-18,64;UBERON:0002240,7.76e-17,6;UBERON:0005174,7.76e-17,6;UBERON:0001137,7.76e-17,6;UBERON:0003528,1.71e-16,29;UBERON:0002791,1.71e-16,29;UBERON:0001893,1.71e-16,29;UBERON:0010314,1.02e-14,92;UBERON:0000955,5.09e-13,47;UBERON:0006238,5.09e-13,47;UBERON:0002257,8.08e-13,3;UBERON:0002780,1.03e-11,39;UBERON:0001890,1.03e-11,39;UBERON:0006240,1.03e-11,39;UBERON:0003076,1.40e-11,12;UBERON:0003057,1.40e-11,12;UBERON:0002616,1.94e-11,46;UBERON:0003080,2.28e-11,40;UBERON:0000956,1.45e-10,21;UBERON:0001869,1.45e-10,21;UBERON:0000203,1.45e-10,21;UBERON:0003056,1.71e-10,49;UBERON:0002256,4.39e-09,2;UBERON:0004111,4.89e-09,122;UBERON:0004766,2.31e-08,2;UBERON:0008193,2.31e-08,2;UBERON:0005913,2.31e-08,2;UBERON:0011158,2.31e-08,2;UBERON:0005744,2.31e-08,2;UBERON:0003457,2.31e-08,2;UBERON:0008001,2.31e-08,2;UBERON:0007497,2.31e-08,2;UBERON:0009955,2.31e-08,2;UBERON:0003067,2.31e-08,2;UBERON:0002546,2.31e-08,2;UBERON:0007914,2.31e-08,2;UBERON:0005253,2.31e-08,2;UBERON:0002227,2.31e-08,2;UBERON:0001846,2.31e-08,2;UBERON:0004339,2.31e-08,2;UBERON:0002105,2.31e-08,2;UBERON:0001678,2.31e-08,2;UBERON:0003128,2.31e-08,2;UBERON:0001694,2.31e-08,2;UBERON:0004681,2.31e-08,2;UBERON:0001839,2.31e-08,2;UBERON:0001690,2.31e-08,2;UBERON:0001844,2.31e-08,2;UBERON:0001849,2.31e-08,2;UBERON:0002499,2.31e-08,2;UBERON:0001855,2.31e-08,2;UBERON:0011137,2.31e-08,2;UBERON:0001703,2.31e-08,2;UBERON:0010323,2.31e-08,2;UBERON:0003129,2.31e-08,2;UBERON:0003069,2.31e-08,2;UBERON:0003051,2.31e-08,2;UBERON:0004637,2.31e-08,2;UBERON:0004761,2.31e-08,2;UBERON:0010113,2.31e-08,2;UBERON:0009123,2.31e-08,2;UBERON:0010351,2.31e-08,2;UBERON:0009617,2.31e-08,2;UBERON:0005641,2.31e-08,2;UBERON:0010349,2.31e-08,2;UBERON:0000025,1.26e-07,114;UBERON:0002619,1.31e-07,17;UBERON:0002420,2.15e-07,8;UBERON:0007245,2.15e-07,8;UBERON:0010009,2.15e-07,8;UBERON:0010011,2.15e-07,8;UBERON:0000454,2.15e-07,8|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,1.75748946187577,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,1.34796496001021,2.97013064329719,0.420649922702764,2.85650984403804,4.19650227808066,0.61245399607477,0.670918297127655,0,0,0.510749352340751,0.153606533256243,0.659431438650969,1.64677758484337,1.56274011167028,1.11673199600552,1.68828783009504,0.61119299110724,10.606629077052,9.8236459751381,2.23679334990361,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0.30140963567143,0.340182495756639,1.2811372028485,0.281105173679186,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,2.86447756719698,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0,0,0.830298780673413,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0,0.114870937911227,0,0,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0|short_description=p@chr10:57505332..57505353,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1518 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:57505332..57505353,+ | |||
|description=CAGE_peak_at_chr10:57505332..57505353,+ | |||
|id=chr10:57505332..57505353,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.53e-32!44;CL:0000133!9.53e-32!44;CL:0002319!1.57e-30!43;CL:0000540!4.01e-25!33;CL:0000047!4.01e-25!33;CL:0000031!4.01e-25!33;CL:0000404!4.01e-25!33;CL:0000055!2.50e-24!50;CL:0000393!1.40e-19!39;CL:0000211!1.40e-19!39;CL:0000117!9.04e-19!23;CL:0000337!9.04e-19!23;CL:0002321!7.05e-15!70;CL:0000220!7.05e-15!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.37e-24,44;CL:0000133,1.37e-24,44;CL:0002319,3.20e-22,43;CL:0000117,1.08e-21,23;CL:0000337,1.08e-21,23;CL:0000540,9.01e-20,33;CL:0000047,9.01e-20,33;CL:0000031,9.01e-20,33;CL:0000404,9.01e-20,33;CL:0000393,2.47e-16,39;CL:0000211,2.47e-16,39;CL:0002321,3.05e-14,70;CL:0002612,8.08e-13,3;CL:0002611,4.39e-09,2;CL:0002605,1.78e-08,2;CL:0002604,1.78e-08,2;CL:0000197,2.31e-08,2;CL:0002491,2.31e-08,2;CL:0000098,2.31e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.38e-32!73;UBERON:0005743!9.38e-32!73;UBERON:0000073!9.83e-32!75;UBERON:0001016!9.83e-32!75;UBERON:0004121!2.28e-26!102;UBERON:0000924!2.28e-26!102;UBERON:0006601!2.28e-26!102;UBERON:0002020!5.47e-24!34;UBERON:0001049!6.27e-19!52;UBERON:0005068!6.27e-19!52;UBERON:0006241!6.27e-19!52;UBERON:0007135!6.27e-19!52;UBERON:0002346!1.46e-18!71;UBERON:0003075!1.46e-18!71;UBERON:0007284!1.46e-18!71;UBERON:0002791!3.43e-18!29;UBERON:0003528!3.43e-18!29;UBERON:0001893!3.43e-18!29;UBERON:0000033!5.45e-17!63;UBERON:0000955!4.66e-16!50;UBERON:0006238!4.66e-16!50;UBERON:0002616!3.36e-15!49;UBERON:0003056!6.70e-13!49;UBERON:0003080!8.02e-13!40;UBERON:0000956!1.28e-12!21;UBERON:0001869!1.28e-12!21;UBERON:0000203!1.28e-12!21;UBERON:0002780!2.14e-12!39;UBERON:0001890!2.14e-12!39;UBERON:0006240!2.14e-12!39;UBERON:0002619!1.88e-09!17;UBERON:0007811!3.54e-09!86;UBERON:0000153!5.30e-08!94;UBERON:0001948!2.12e-07!5;UBERON:0002315!2.12e-07!5;UBERON:0003076!4.19e-07!12;UBERON:0003057!4.19e-07!12;UBERON:0002420!7.91e-07!8;UBERON:0007245!7.91e-07!8;UBERON:0010009!7.91e-07!8;UBERON:0010011!7.91e-07!8;UBERON:0000454!7.91e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.37e-29,34;UBERON:0001017,1.97e-21,73;UBERON:0001016,9.19e-21,75;UBERON:0001049,1.01e-20,52;UBERON:0005068,1.01e-20,52;UBERON:0006241,1.01e-20,52;UBERON:0007135,1.01e-20,52;UBERON:0001948,3.02e-20,5;UBERON:0002315,3.02e-20,5;UBERON:0000073,7.85e-20,54;UBERON:0010371,1.70e-19,73;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0002346,3.35e-18,64;UBERON:0003075,3.35e-18,64;UBERON:0007284,3.35e-18,64;UBERON:0002240,7.76e-17,6;UBERON:0005174,7.76e-17,6;UBERON:0001137,7.76e-17,6;UBERON:0003528,1.71e-16,29;UBERON:0002791,1.71e-16,29;UBERON:0001893,1.71e-16,29;UBERON:0010314,1.02e-14,92;UBERON:0000955,5.09e-13,47;UBERON:0006238,5.09e-13,47;UBERON:0002257,8.08e-13,3;UBERON:0002780,1.03e-11,39;UBERON:0001890,1.03e-11,39;UBERON:0006240,1.03e-11,39;UBERON:0003076,1.40e-11,12;UBERON:0003057,1.40e-11,12;UBERON:0002616,1.94e-11,46;UBERON:0003080,2.28e-11,40;UBERON:0000956,1.45e-10,21;UBERON:0001869,1.45e-10,21;UBERON:0000203,1.45e-10,21;UBERON:0003056,1.71e-10,49;UBERON:0002256,4.39e-09,2;UBERON:0004111,4.89e-09,122;UBERON:0004766,2.31e-08,2;UBERON:0008193,2.31e-08,2;UBERON:0005913,2.31e-08,2;UBERON:0011158,2.31e-08,2;UBERON:0005744,2.31e-08,2;UBERON:0003457,2.31e-08,2;UBERON:0008001,2.31e-08,2;UBERON:0007497,2.31e-08,2;UBERON:0009955,2.31e-08,2;UBERON:0003067,2.31e-08,2;UBERON:0002546,2.31e-08,2;UBERON:0007914,2.31e-08,2;UBERON:0005253,2.31e-08,2;UBERON:0002227,2.31e-08,2;UBERON:0001846,2.31e-08,2;UBERON:0004339,2.31e-08,2;UBERON:0002105,2.31e-08,2;UBERON:0001678,2.31e-08,2;UBERON:0003128,2.31e-08,2;UBERON:0001694,2.31e-08,2;UBERON:0004681,2.31e-08,2;UBERON:0001839,2.31e-08,2;UBERON:0001690,2.31e-08,2;UBERON:0001844,2.31e-08,2;UBERON:0001849,2.31e-08,2;UBERON:0002499,2.31e-08,2;UBERON:0001855,2.31e-08,2;UBERON:0011137,2.31e-08,2;UBERON:0001703,2.31e-08,2;UBERON:0010323,2.31e-08,2;UBERON:0003129,2.31e-08,2;UBERON:0003069,2.31e-08,2;UBERON:0003051,2.31e-08,2;UBERON:0004637,2.31e-08,2;UBERON:0004761,2.31e-08,2;UBERON:0010113,2.31e-08,2;UBERON:0009123,2.31e-08,2;UBERON:0010351,2.31e-08,2;UBERON:0009617,2.31e-08,2;UBERON:0005641,2.31e-08,2;UBERON:0010349,2.31e-08,2;UBERON:0000025,1.26e-07,114;UBERON:0002619,1.31e-07,17;UBERON:0002420,2.15e-07,8;UBERON:0007245,2.15e-07,8;UBERON:0010009,2.15e-07,8;UBERON:0010011,2.15e-07,8;UBERON:0000454,2.15e-07,8 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,1.75748946187577,1.94429899074283,0.279972843250725,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,1.34796496001021,2.97013064329719,0.420649922702764,2.85650984403804,4.19650227808066,0.61245399607477,0.670918297127655,0,0,0.510749352340751,0.153606533256243,0.659431438650969,1.64677758484337,1.56274011167028,1.11673199600552,1.68828783009504,0.61119299110724,10.606629077052,9.8236459751381,2.23679334990361,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.628271760564322,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0.30140963567143,0.340182495756639,1.2811372028485,0.281105173679186,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0.823236899034275,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,2.86447756719698,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0,0,0.830298780673413,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0,0.114870937911227,0,0,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr10:57505332..57505353,+ | |||
}} |
Latest revision as of 11:49, 4 August 2015
Short description: | p@chr10:57505332..57505353, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:57505332..57505353, + |
Coexpression cluster: | MCL_coexpression_mm9:1518 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.37e-24 | 44 |
neurectodermal cell | 1.37e-24 | 44 |
neural cell | 3.20e-22 | 43 |
CNS neuron (sensu Vertebrata) | 1.08e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-21 | 23 |
neuron | 9.01e-20 | 33 |
neuronal stem cell | 9.01e-20 | 33 |
neuroblast | 9.01e-20 | 33 |
electrically signaling cell | 9.01e-20 | 33 |
electrically responsive cell | 2.47e-16 | 39 |
electrically active cell | 2.47e-16 | 39 |
embryonic cell | 3.05e-14 | 70 |
neuron of the ventral spinal cord | 8.08e-13 | 3 |
neuron of the dorsal spinal cord | 4.39e-09 | 2 |
astrocyte of the cerebral cortex | 1.78e-08 | 2 |
astrocyte of the hippocampus | 1.78e-08 | 2 |
receptor cell | 2.31e-08 | 2 |
auditory epithelial cell | 2.31e-08 | 2 |
sensory epithelial cell | 2.31e-08 | 2 |