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FFCP PHASE1:Mm9::chr10:40655977..40656012,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:40655977..40656012,+
|DHSsupport=NA
|short_description=p@chr10:40655977..40656012,+
|DPIdataset=NA
|description=CAGE_peak_at_chr10:40655977..40656012,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr10:40655977..40656012,+
|description=CAGE_peak_at_chr10:40655977..40656012,+
|id=chr10:40655977..40656012,+
|ontology_enrichment_celltype=CL:0000117!6.67e-09!23;CL:0000337!6.67e-09!23;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-14,23;CL:0000337,2.77e-14,23;CL:0000540,7.54e-09,33;CL:0000047,7.54e-09,33;CL:0000031,7.54e-09,33;CL:0000404,7.54e-09,33;CL:0000393,5.87e-07,39;CL:0000211,5.87e-07,39;CL:0002319,6.65e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.59e-18!73;UBERON:0005743!1.59e-18!73;UBERON:0001049!4.81e-18!52;UBERON:0005068!4.81e-18!52;UBERON:0006241!4.81e-18!52;UBERON:0007135!4.81e-18!52;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0002346!2.71e-17!71;UBERON:0003075!2.71e-17!71;UBERON:0007284!2.71e-17!71;UBERON:0000955!8.96e-16!50;UBERON:0006238!8.96e-16!50;UBERON:0004121!2.25e-15!102;UBERON:0000924!2.25e-15!102;UBERON:0006601!2.25e-15!102;UBERON:0002020!2.56e-15!34;UBERON:0000033!3.42e-15!63;UBERON:0002616!3.93e-15!49;UBERON:0003056!7.33e-15!49;UBERON:0003080!5.51e-14!40;UBERON:0002780!2.10e-13!39;UBERON:0001890!2.10e-13!39;UBERON:0006240!2.10e-13!39;UBERON:0002791!1.79e-12!29;UBERON:0003528!1.79e-12!29;UBERON:0001893!1.79e-12!29;UBERON:0000956!2.50e-09!21;UBERON:0001869!2.50e-09!21;UBERON:0000203!2.50e-09!21;UBERON:0002021!4.04e-08!10;UBERON:0000411!4.04e-08!10;UBERON:0001950!4.04e-08!10;UBERON:0000153!5.61e-08!94;UBERON:0002619!1.89e-07!17;UBERON:0000025!5.04e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-32,34;UBERON:0000073,2.10e-31,54;UBERON:0001049,1.29e-30,52;UBERON:0005068,1.29e-30,52;UBERON:0006241,1.29e-30,52;UBERON:0007135,1.29e-30,52;UBERON:0000955,4.59e-28,47;UBERON:0006238,4.59e-28,47;UBERON:0003528,8.45e-28,29;UBERON:0002791,8.45e-28,29;UBERON:0001893,8.45e-28,29;UBERON:0001017,8.87e-28,73;UBERON:0001016,8.76e-27,75;UBERON:0002616,1.43e-26,46;UBERON:0002346,6.29e-25,64;UBERON:0003075,6.29e-25,64;UBERON:0007284,6.29e-25,64;UBERON:0003080,1.49e-24,40;UBERON:0002780,3.33e-23,39;UBERON:0001890,3.33e-23,39;UBERON:0006240,3.33e-23,39;UBERON:0010371,8.84e-21,73;UBERON:0000956,1.23e-20,21;UBERON:0001869,1.23e-20,21;UBERON:0000203,1.23e-20,21;UBERON:0004121,1.95e-20,95;UBERON:0000924,1.95e-20,95;UBERON:0006601,1.95e-20,95;UBERON:0003056,1.97e-20,49;UBERON:0002619,1.91e-17,17;UBERON:0002021,1.92e-15,10;UBERON:0000411,1.92e-15,10;UBERON:0001950,1.92e-15,10;UBERON:0010314,1.04e-14,92;UBERON:0000369,1.35e-09,5;UBERON:0002435,1.35e-09,5;UBERON:0000204,1.35e-09,5;UBERON:0010082,1.35e-09,5;UBERON:0000025,2.00e-09,114;UBERON:0004111,2.75e-08,122;UBERON:0002420,3.47e-08,8;UBERON:0007245,3.47e-08,8;UBERON:0010009,3.47e-08,8;UBERON:0010011,3.47e-08,8;UBERON:0000454,3.47e-08,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.42779753031517,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,2.29510095163874,0.420649922702764,1.99955689082663,0.883474163806454,1.10241719293459,2.30029130443767,0,0,3.06449611404451,0.921639199537461,1.58263545276233,4.11694396210843,1.56274011167028,0.558365998002762,0,2.44477196442896,2.35702868378934,1.85083185038834,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.34224637609238,6.91174132484402,0.255457055208591,0,0,0,1.9472783122627,3.20250421973039,4.14659361972453,3.82413504423008,3.3243009452943,2.0778804455956,2.43361894601636,0.509196819251581,0,0,0.210441855886474,1.43132487258974,0,0.180062129805349,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,0.517406741478031,0.862271971731369,1.51284864134255,0.703804496655795,0.876782929710299,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0,0.162137619091711,0,0,0,5.25724871410318,4.32199371992995,0,0,1.2797295032114,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,0.937693492737625,0.491804836130026,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.584511715822624,0,2.57057053137446,0.425820255624806,1.06839362200353,0.488660878060728,0.659880491890142,0,0.728341908464944,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0.63549621259146,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,1.69107881605257,2.39226473670366,0.496375471371293,0.777804753376191,0.387479470433193,0.675824501963113,1.05621514781179,1.0416350787516,1.57289016638566,0.241584120826006,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0,0.549454872801795,0,0,11.2950368523413,5.06357760157895,3.43737308063638,12.3734291287455,1.37016503954128,0.755393897389701,4.05013500139084,3.60256962579376,4.07828168085784,3.10656187051092,1.24544817101012,0.399024873401031,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.631790158511746,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,1.07435527024149,0.765153328275374,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.42779753031517,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,2.29510095163874,0.420649922702764,1.99955689082663,0.883474163806454,1.10241719293459,2.30029130443767,0,0,3.06449611404451,0.921639199537461,1.58263545276233,4.11694396210843,1.56274011167028,0.558365998002762,0,2.44477196442896,2.35702868378934,1.85083185038834,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.34224637609238,6.91174132484402,0.255457055208591,0,0,0,1.9472783122627,3.20250421973039,4.14659361972453,3.82413504423008,3.3243009452943,2.0778804455956,2.43361894601636,0.509196819251581,0,0,0.210441855886474,1.43132487258974,0,0.180062129805349,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,0.517406741478031,0.862271971731369,1.51284864134255,0.703804496655795,0.876782929710299,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0,0.162137619091711,0,0,0,5.25724871410318,4.32199371992995,0,0,1.2797295032114,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,0.937693492737625,0.491804836130026,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.584511715822624,0,2.57057053137446,0.425820255624806,1.06839362200353,0.488660878060728,0.659880491890142,0,0.728341908464944,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0.63549621259146,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,1.69107881605257,2.39226473670366,0.496375471371293,0.777804753376191,0.387479470433193,0.675824501963113,1.05621514781179,1.0416350787516,1.57289016638566,0.241584120826006,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0,0.549454872801795,0,0,11.2950368523413,5.06357760157895,3.43737308063638,12.3734291287455,1.37016503954128,0.755393897389701,4.05013500139084,3.60256962579376,4.07828168085784,3.10656187051092,1.24544817101012,0.399024873401031,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.631790158511746,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,1.07435527024149,0.765153328275374,0,0
|short_description=p@chr10:40655977..40656012,+
}}
}}

Latest revision as of 08:59, 4 August 2015

Short description:p@chr10:40655977..40656012, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:40655977..40656012, +
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr10:40655977..40656012+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.77e-1423
neuroblast (sensu Vertebrata)2.77e-1423
neuron7.54e-0933
neuronal stem cell7.54e-0933
neuroblast7.54e-0933
electrically signaling cell7.54e-0933
electrically responsive cell5.87e-0739
electrically active cell5.87e-0739
neural cell6.65e-0743

Uber anatomy
Ontology termp-valuen
gray matter1.25e-3234
regional part of nervous system2.10e-3154
neural tube1.29e-3052
neural rod1.29e-3052
future spinal cord1.29e-3052
neural keel1.29e-3052
brain4.59e-2847
future brain4.59e-2847
brain grey matter8.45e-2829
regional part of telencephalon8.45e-2829
telencephalon8.45e-2829
central nervous system8.87e-2873
nervous system8.76e-2775
regional part of brain1.43e-2646
neurectoderm6.29e-2564
neural plate6.29e-2564
presumptive neural plate6.29e-2564
anterior neural tube1.49e-2440
regional part of forebrain3.33e-2339
forebrain3.33e-2339
future forebrain3.33e-2339
ecto-epithelium8.84e-2173
cerebral cortex1.23e-2021
cerebral hemisphere1.23e-2021
pallium1.23e-2021
ectoderm-derived structure1.95e-2095
ectoderm1.95e-2095
presumptive ectoderm1.95e-2095
pre-chordal neural plate1.97e-2049
regional part of cerebral cortex1.91e-1717
occipital lobe1.92e-1510
visual cortex1.92e-1510
neocortex1.92e-1510
structure with developmental contribution from neural crest1.04e-1492
corpus striatum1.35e-095
striatum1.35e-095
ventral part of telencephalon1.35e-095
future corpus striatum1.35e-095
tube2.00e-09114
anatomical conduit2.75e-08122
basal ganglion3.47e-088
nuclear complex of neuraxis3.47e-088
aggregate regional part of brain3.47e-088
collection of basal ganglia3.47e-088
cerebral subcortex3.47e-088
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