FFCP PHASE1:Mm9::chr17:15511590..15511601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-362bp_to_ENSMUST00000153434_5end | |association_with_transcript=-362bp_to_ENSMUST00000153434_5end | ||
|cluster_id=chr17:15511590..15511601,+ | |||
|description=CAGE_peak_5_at_ENSMUST00000153434_5end | |description=CAGE_peak_5_at_ENSMUST00000153434_5end | ||
|id=chr17:15511590..15511601,+ | |id=chr17:15511590..15511601,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.81e-13!3;CL:0000627!1.81e-13!3;CL:0000682!1.81e-13!3;CL:0000239!6.10e-12!6;CL:0000677!6.10e-12!6;CL:0000212!6.10e-12!6;CL:0000584!6.10e-12!6;CL:0002563!8.35e-12!9;CL:0002251!8.35e-12!9;CL:0000075!3.01e-10!7;CL:0000066!6.57e-10!25;CL:0002076!5.57e-07!15 | |ontology_enrichment_celltype=CL:0000473!1.81e-13!3;CL:0000627!1.81e-13!3;CL:0000682!1.81e-13!3;CL:0000239!6.10e-12!6;CL:0000677!6.10e-12!6;CL:0000212!6.10e-12!6;CL:0000584!6.10e-12!6;CL:0002563!8.35e-12!9;CL:0002251!8.35e-12!9;CL:0000075!3.01e-10!7;CL:0000066!6.57e-10!25;CL:0002076!5.57e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-29,6;CL:0000677,1.22e-29,6;CL:0000584,1.22e-29,6;CL:0000075,1.71e-25,7;CL:0002563,5.87e-20,9;CL:0002251,5.87e-20,9;CL:0000066,7.05e-16,25;CL:0000682,1.73e-15,3;CL:0002076,3.59e-12,15;CL:0000223,3.13e-09,20;CL:0000473,3.52e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.57e-22!15;UBERON:0001242!2.95e-15!13;UBERON:0000060!2.95e-15!13;UBERON:0001262!2.95e-15!13;UBERON:0004786!2.95e-15!13;UBERON:0004923!4.45e-13!24;UBERON:0003350!8.35e-12!9;UBERON:0004808!8.35e-12!9;UBERON:0001277!8.35e-12!9;UBERON:0001962!1.14e-09!2;UBERON:0001961!1.14e-09!2;UBERON:0001744!1.14e-09!2;UBERON:0000485!1.29e-09!11;UBERON:0000160!4.46e-08!43 | |ontology_enrichment_uberon=UBERON:0000344!9.57e-22!15;UBERON:0001242!2.95e-15!13;UBERON:0000060!2.95e-15!13;UBERON:0001262!2.95e-15!13;UBERON:0004786!2.95e-15!13;UBERON:0004923!4.45e-13!24;UBERON:0003350!8.35e-12!9;UBERON:0004808!8.35e-12!9;UBERON:0001277!8.35e-12!9;UBERON:0001962!1.14e-09!2;UBERON:0001961!1.14e-09!2;UBERON:0001744!1.14e-09!2;UBERON:0000485!1.29e-09!11;UBERON:0000160!4.46e-08!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.53e-26,15;UBERON:0001962,1.09e-22,2;UBERON:0001961,1.09e-22,2;UBERON:0001744,1.09e-22,2;UBERON:0003350,5.87e-20,9;UBERON:0004808,5.87e-20,9;UBERON:0001277,5.87e-20,9;UBERON:0004923,1.56e-16,24;UBERON:0000485,2.00e-16,11;UBERON:0002465,1.73e-15,3;UBERON:0001242,5.65e-14,13;UBERON:0001262,5.65e-14,13;UBERON:0004786,5.65e-14,13;UBERON:0003199,2.59e-12,1 | |||
|phase1_expression=0,2.79180326111489,4.54999239389536,0,0,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,2.3998863419011,3.44113921600755,0.57423196411502,2.15380998079537,4.09395342103189,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,4.54999239389536,0,0,3.52546471014969,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,2.3998863419011,3.44113921600755,0.57423196411502,2.15380998079537,4.09395342103189,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@ENSMUST00000153434 | |short_description=p5@ENSMUST00000153434 | ||
}} | }} |
Latest revision as of 08:21, 4 August 2015
Short description: | p5@ENSMUST00000153434 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENSMUST00000153434_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -362bp_to_ENSMUST00000153434_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.22e-29 | 6 |
gut absorptive cell | 1.22e-29 | 6 |
enterocyte | 1.22e-29 | 6 |
columnar/cuboidal epithelial cell | 1.71e-25 | 7 |
intestinal epithelial cell | 5.87e-20 | 9 |
epithelial cell of alimentary canal | 5.87e-20 | 9 |
epithelial cell | 7.05e-16 | 25 |
M cell of gut | 1.73e-15 | 3 |
endo-epithelial cell | 3.59e-12 | 15 |
endodermal cell | 3.13e-09 | 20 |
defensive cell | 3.52e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.53e-26 | 15 |
gut-associated lymphoid tissue | 1.09e-22 | 2 |
mucosa-associated lymphoid tissue | 1.09e-22 | 2 |
lymphoid tissue | 1.09e-22 | 2 |
epithelium of mucosa | 5.87e-20 | 9 |
gastrointestinal system epithelium | 5.87e-20 | 9 |
intestinal epithelium | 5.87e-20 | 9 |
organ component layer | 1.56e-16 | 24 |
simple columnar epithelium | 2.00e-16 | 11 |
lymphoid system | 1.73e-15 | 3 |
intestinal mucosa | 5.65e-14 | 13 |
wall of intestine | 5.65e-14 | 13 |
gastrointestinal system mucosa | 5.65e-14 | 13 |
egg chamber | 2.59e-12 | 1 |