FFCP PHASE1:Mm9::chr3:95090660..95090704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=595 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:95090660..95090704,+ | |||
|description=CAGE_peak_at_chr3:95090660..95090704,+ | |description=CAGE_peak_at_chr3:95090660..95090704,+ | ||
|id=chr3:95090660..95090704,+ | |id=chr3:95090660..95090704,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.59e-15,7;CL:0000764,3.29e-15,3;CL:0000765,3.29e-15,3;CL:0000038,3.29e-15,3;CL:0000547,3.29e-15,3;CL:0002494,3.02e-13,3;CL:0000737,3.02e-13,3;CL:0000746,3.02e-13,3;CL:0000513,3.02e-13,3;CL:0000839,1.56e-12,13;CL:0000680,1.46e-11,6;CL:0000187,1.46e-11,6;CL:0000056,1.46e-11,6;CL:0000763,4.34e-10,16;CL:0002476,8.62e-10,2;CL:0000050,9.34e-09,9;CL:0000049,2.06e-08,19;CL:0000355,9.13e-08,9;CL:0000215,3.71e-07,3;CL:0000219,4.12e-07,54;CL:0002092,4.56e-07,3;CL:0002540,4.56e-07,3;CL:0002320,6.59e-07,46;CL:0000134,6.59e-07,46;CL:0000034,8.59e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.29e-15,3;DOID:0060083,3.29e-15,3;DOID:1240,3.29e-15,3;DOID:0050686,7.83e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.38e-10,32;UBERON:0001134,9.13e-08,9;UBERON:0002036,9.13e-08,9;UBERON:0002385,9.13e-08,9;UBERON:0000486,9.13e-08,9;UBERON:0007503,9.13e-08,9;UBERON:0001015,9.13e-08,9;UBERON:0002329,9.13e-08,9;UBERON:0003082,9.13e-08,9;UBERON:0003059,9.13e-08,9;UBERON:0007282,9.13e-08,9;UBERON:0004290,9.13e-08,9;UBERON:0009618,9.13e-08,9;UBERON:0000383,5.29e-07,10;UBERON:0002371,5.80e-07,16;UBERON:0002384,6.59e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,2.09868563438444,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,62.8680366725035,59.6612843957033,31.6963362030877,0,0,0,0,0.7813353445238,0,0.588231488031014,0,0,1.1330713617802,0.608261587317087,0.734187008646726,0,0,0,0,0.419959264876088,0,0,0,0,1.02903774414379,1.14613375975503,1.03134418455488,0,0,0,0.677689064138264,0,1.3498495759221,0,2.1314403448383,0.299600110518405,0.768436610643109,0.207379224616955,0,0,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,3.55913108665965,0.755715601067855,1.73918693221007,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.479260498023681,0,0.127070227073065,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.324482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0.834141747676794,0.696504333044333,0,0,0,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0.878200461164203,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0.493588655687202,0,0.500535317148282,0.982794975566015,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0.590603785761546,0,1.03371317267288,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.42366414172764,0.220528398054962,0,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0.82554747185289,0.555583582109135,0.376736914009382,0.27338845544205,0.228778173206523,1.01987057996313,0.419854356970974,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0.5208175393758,0,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0,1.31377732815827,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,2.09868563438444,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,62.8680366725035,59.6612843957033,31.6963362030877,0,0,0,0,0.7813353445238,0,0.588231488031014,0,0,1.1330713617802,0.608261587317087,0.734187008646726,0,0,0,0,0.419959264876088,0,0,0,0,1.02903774414379,1.14613375975503,1.03134418455488,0,0,0,0.677689064138264,0,1.3498495759221,0,2.1314403448383,0.299600110518405,0.768436610643109,0.207379224616955,0,0,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,3.55913108665965,0.755715601067855,1.73918693221007,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.593768556259299,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.479260498023681,0,0.127070227073065,0.149790639404823,0.457500602818626,0,0,0,0.41557608911912,0.324482526135515,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,0.834141747676794,0.696504333044333,0,0,0,0.51469581422943,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0.878200461164203,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0.493588655687202,0,0.500535317148282,0.982794975566015,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0.162886959353576,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0.590603785761546,0,1.03371317267288,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.87737366450968,0.42366414172764,0.220528398054962,0,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0.82554747185289,0.555583582109135,0.376736914009382,0.27338845544205,0.228778173206523,1.01987057996313,0.419854356970974,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0,0,0.117357238645754,0.5208175393758,0,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0,1.31377732815827,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.354951612318675,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr3:95090660..95090704,+ | |short_description=p@chr3:95090660..95090704,+ | ||
}} | }} |
Latest revision as of 08:10, 4 August 2015
Short description: | p@chr3:95090660..95090704, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95090660..95090704, + |
Coexpression cluster: | MCL_coexpression_mm9:595 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.59e-15 | 7 |
erythroid lineage cell | 3.29e-15 | 3 |
erythroblast | 3.29e-15 | 3 |
erythroid progenitor cell | 3.29e-15 | 3 |
proerythroblast | 3.29e-15 | 3 |
cardiocyte | 3.02e-13 | 3 |
striated muscle cell | 3.02e-13 | 3 |
cardiac muscle cell | 3.02e-13 | 3 |
cardiac muscle myoblast | 3.02e-13 | 3 |
myeloid lineage restricted progenitor cell | 1.56e-12 | 13 |
muscle precursor cell | 1.46e-11 | 6 |
muscle cell | 1.46e-11 | 6 |
myoblast | 1.46e-11 | 6 |
myeloid cell | 4.34e-10 | 16 |
bone marrow macrophage | 8.62e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 9.34e-09 | 9 |
common myeloid progenitor | 2.06e-08 | 19 |
multi-potent skeletal muscle stem cell | 9.13e-08 | 9 |
barrier cell | 3.71e-07 | 3 |
motile cell | 4.12e-07 | 54 |
bone marrow cell | 4.56e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.56e-07 | 3 |
connective tissue cell | 6.59e-07 | 46 |
mesenchymal cell | 6.59e-07 | 46 |
stem cell | 8.59e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.38e-10 | 32 |
skeletal muscle tissue | 9.13e-08 | 9 |
striated muscle tissue | 9.13e-08 | 9 |
muscle tissue | 9.13e-08 | 9 |
multilaminar epithelium | 9.13e-08 | 9 |
epithelial vesicle | 9.13e-08 | 9 |
musculature | 9.13e-08 | 9 |
somite | 9.13e-08 | 9 |
myotome | 9.13e-08 | 9 |
presomitic mesoderm | 9.13e-08 | 9 |
presumptive segmental plate | 9.13e-08 | 9 |
dermomyotome | 9.13e-08 | 9 |
trunk paraxial mesoderm | 9.13e-08 | 9 |
musculature of body | 5.29e-07 | 10 |
bone marrow | 5.80e-07 | 16 |
connective tissue | 6.59e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.29e-15 | 3 |
immune system cancer | 3.29e-15 | 3 |
leukemia | 3.29e-15 | 3 |
organ system cancer | 7.83e-08 | 6 |