FFCP PHASE1:Mm9::chr8:90484384..90484400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2485 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:90484384..90484400,- | |||
|description=CAGE_peak_at_chr8:90484384..90484400,- | |description=CAGE_peak_at_chr8:90484384..90484400,- | ||
|id=chr8:90484384..90484400,- | |id=chr8:90484384..90484400,- | ||
|ontology_enrichment_celltype=CL:0002319!2.92e-14!43;CL:0000221!1.22e-13!44;CL:0000133!1.22e-13!44;CL:0000055!4.00e-11!50;CL:0000117!5.62e-11!23;CL:0000337!5.62e-11!23;CL:0000540!9.37e-10!33;CL:0000047!9.37e-10!33;CL:0000031!9.37e-10!33;CL:0000404!9.37e-10!33;CL:0002453!5.55e-08!8;CL:0000393!1.73e-07!39;CL:0000211!1.73e-07!39 | |ontology_enrichment_celltype=CL:0002319!2.92e-14!43;CL:0000221!1.22e-13!44;CL:0000133!1.22e-13!44;CL:0000055!4.00e-11!50;CL:0000117!5.62e-11!23;CL:0000337!5.62e-11!23;CL:0000540!9.37e-10!33;CL:0000047!9.37e-10!33;CL:0000031!9.37e-10!33;CL:0000404!9.37e-10!33;CL:0002453!5.55e-08!8;CL:0000393!1.73e-07!39;CL:0000211!1.73e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.51e-29,43;CL:0000221,1.29e-28,44;CL:0000133,1.29e-28,44;CL:0002453,6.16e-23,8;CL:0000117,8.54e-22,23;CL:0000337,8.54e-22,23;CL:0000333,2.72e-18,10;CL:0000095,2.72e-18,10;CL:0000243,2.72e-18,10;CL:0000123,2.72e-18,10;CL:0000125,2.72e-18,10;CL:0000030,2.72e-18,10;CL:0000339,2.72e-18,10;CL:0002321,2.97e-17,70;CL:0002613,6.51e-17,3;CL:0000120,1.35e-16,3;CL:0000540,8.51e-15,33;CL:0000047,8.51e-15,33;CL:0000031,8.51e-15,33;CL:0000404,8.51e-15,33;CL:0000128,5.31e-14,6;CL:0000126,5.31e-14,6;CL:0000127,5.31e-14,6;CL:0000393,2.59e-12,39;CL:0000211,2.59e-12,39;CL:0000878,1.88e-11,2;CL:0000129,1.88e-11,2;CL:0002605,7.80e-11,2;CL:0002604,7.80e-11,2;CL:0002612,5.88e-08,3;CL:0002610,7.46e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-19!73;UBERON:0005743!2.23e-19!73;UBERON:0000073!2.59e-18!75;UBERON:0001016!2.59e-18!75;UBERON:0004121!1.83e-15!102;UBERON:0000924!1.83e-15!102;UBERON:0006601!1.83e-15!102;UBERON:0001049!6.69e-13!52;UBERON:0005068!6.69e-13!52;UBERON:0006241!6.69e-13!52;UBERON:0007135!6.69e-13!52;UBERON:0002346!7.11e-13!71;UBERON:0003075!7.11e-13!71;UBERON:0007284!7.11e-13!71;UBERON:0000955!1.61e-10!50;UBERON:0006238!1.61e-10!50;UBERON:0000033!2.86e-10!63;UBERON:0002616!6.07e-10!49;UBERON:0003076!3.21e-09!12;UBERON:0003057!3.21e-09!12;UBERON:0002020!3.81e-08!34;UBERON:0003056!4.41e-07!49;UBERON:0002780!7.50e-07!39;UBERON:0001890!7.50e-07!39;UBERON:0006240!7.50e-07!39 | |ontology_enrichment_uberon=UBERON:0001017!2.23e-19!73;UBERON:0005743!2.23e-19!73;UBERON:0000073!2.59e-18!75;UBERON:0001016!2.59e-18!75;UBERON:0004121!1.83e-15!102;UBERON:0000924!1.83e-15!102;UBERON:0006601!1.83e-15!102;UBERON:0001049!6.69e-13!52;UBERON:0005068!6.69e-13!52;UBERON:0006241!6.69e-13!52;UBERON:0007135!6.69e-13!52;UBERON:0002346!7.11e-13!71;UBERON:0003075!7.11e-13!71;UBERON:0007284!7.11e-13!71;UBERON:0000955!1.61e-10!50;UBERON:0006238!1.61e-10!50;UBERON:0000033!2.86e-10!63;UBERON:0002616!6.07e-10!49;UBERON:0003076!3.21e-09!12;UBERON:0003057!3.21e-09!12;UBERON:0002020!3.81e-08!34;UBERON:0003056!4.41e-07!49;UBERON:0002780!7.50e-07!39;UBERON:0001890!7.50e-07!39;UBERON:0006240!7.50e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-16,73;UBERON:0001016,5.75e-16,75;UBERON:0004121,3.67e-12,95;UBERON:0000924,3.67e-12,95;UBERON:0006601,3.67e-12,95;UBERON:0000369,2.29e-10,5;UBERON:0002435,2.29e-10,5;UBERON:0000204,2.29e-10,5;UBERON:0010082,2.29e-10,5;UBERON:0000073,2.40e-08,54;UBERON:0002257,5.88e-08,3;UBERON:0004684,7.46e-08,3;UBERON:0002275,7.46e-08,3;UBERON:0002020,6.75e-07,34 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.872100625521786,1.31811709640683,1.1665793944457,0.419959264876088,2.87505128729943,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.26766280701236,0.677689064138264,0,0,0,0,1.49800055259202,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,0.883474163806454,0.122490799214954,0.287536413054709,0,0,1.91531007127782,1.38245879930619,2.76961204233407,3.47653045689157,1.56274011167028,0,0,0.30559649555362,0.589257170947335,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.521472960576829,0,0.41557608911912,0.162241263067758,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0,0.431135985865684,0.945530400839096,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.92614151141356,0,0,0.426576501070468,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0.472905432318573,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.646793418913773,0.214337035031592,0,0.891844088010353,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0 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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0.872100625521786,1.31811709640683,1.1665793944457,0.419959264876088,2.87505128729943,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.26766280701236,0.677689064138264,0,0,0,0,1.49800055259202,2.30530983192933,0.622137673850866,0.405017814995072,0.630974884054146,0.856952953211411,0.883474163806454,0.122490799214954,0.287536413054709,0,0,1.91531007127782,1.38245879930619,2.76961204233407,3.47653045689157,1.56274011167028,0,0,0.30559649555362,0.589257170947335,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0.521472960576829,0,0.41557608911912,0.162241263067758,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0,0.30140963567143,0.544291993210623,0.384341160854549,0.374806898238915,0,0.431135985865684,0.945530400839096,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.92614151141356,0,0,0.426576501070468,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0.472905432318573,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.646793418913773,0.214337035031592,0,0.891844088010353,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.280924522409647,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p@chr8:90484384..90484400,- | |short_description=p@chr8:90484384..90484400,- | ||
}} | }} |
Latest revision as of 07:30, 4 August 2015
Short description: | p@chr8:90484384..90484400, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:90484384..90484400, - |
Coexpression cluster: | MCL_coexpression_mm9:2485 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.51e-29 | 43 |
ectodermal cell | 1.29e-28 | 44 |
neurectodermal cell | 1.29e-28 | 44 |
oligodendrocyte precursor cell | 6.16e-23 | 8 |
CNS neuron (sensu Vertebrata) | 8.54e-22 | 23 |
neuroblast (sensu Vertebrata) | 8.54e-22 | 23 |
migratory neural crest cell | 2.72e-18 | 10 |
neuron associated cell | 2.72e-18 | 10 |
glial cell (sensu Vertebrata) | 2.72e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 2.72e-18 | 10 |
glial cell | 2.72e-18 | 10 |
glioblast | 2.72e-18 | 10 |
glioblast (sensu Vertebrata) | 2.72e-18 | 10 |
embryonic cell | 2.97e-17 | 70 |
striatum neuron | 6.51e-17 | 3 |
granule cell | 1.35e-16 | 3 |
neuron | 8.51e-15 | 33 |
neuronal stem cell | 8.51e-15 | 33 |
neuroblast | 8.51e-15 | 33 |
electrically signaling cell | 8.51e-15 | 33 |
oligodendrocyte | 5.31e-14 | 6 |
macroglial cell | 5.31e-14 | 6 |
astrocyte | 5.31e-14 | 6 |
electrically responsive cell | 2.59e-12 | 39 |
electrically active cell | 2.59e-12 | 39 |
central nervous system macrophage | 1.88e-11 | 2 |
microglial cell | 1.88e-11 | 2 |
astrocyte of the cerebral cortex | 7.80e-11 | 2 |
astrocyte of the hippocampus | 7.80e-11 | 2 |
neuron of the ventral spinal cord | 5.88e-08 | 3 |
raphe nuclei neuron | 7.46e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.85e-16 | 73 |
nervous system | 5.75e-16 | 75 |
ectoderm-derived structure | 3.67e-12 | 95 |
ectoderm | 3.67e-12 | 95 |
presumptive ectoderm | 3.67e-12 | 95 |
corpus striatum | 2.29e-10 | 5 |
striatum | 2.29e-10 | 5 |
ventral part of telencephalon | 2.29e-10 | 5 |
future corpus striatum | 2.29e-10 | 5 |
regional part of nervous system | 2.40e-08 | 54 |
ventral horn of spinal cord | 5.88e-08 | 3 |
raphe nuclei | 7.46e-08 | 3 |
reticular formation | 7.46e-08 | 3 |
gray matter | 6.75e-07 | 34 |