FFCP PHASE1:Mm9::chr19:47098327..47098338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47098327..47098338,+ | |||
|description=CAGE_peak_at_chr19:47098327..47098338,+ | |description=CAGE_peak_at_chr19:47098327..47098338,+ | ||
|id=chr19:47098327..47098338,+ | |id=chr19:47098327..47098338,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.07e-26!23;CL:0000337!1.07e-26!23;CL:0000540!3.99e-20!33;CL:0000047!3.99e-20!33;CL:0000031!3.99e-20!33;CL:0000404!3.99e-20!33;CL:0000393!6.86e-16!39;CL:0000211!6.86e-16!39;CL:0000221!1.83e-14!44;CL:0000133!1.83e-14!44;CL:0002319!9.68e-14!43;CL:0000055!7.75e-11!50;CL:0002609!6.53e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,3.62e-30,3;CL:0000117,5.71e-27,23;CL:0000337,5.71e-27,23;CL:0000540,9.03e-19,33;CL:0000047,9.03e-19,33;CL:0000031,9.03e-19,33;CL:0000404,9.03e-19,33;CL:0000393,7.36e-16,39;CL:0000211,7.36e-16,39;CL:0002319,2.29e-14,43;CL:0002613,4.25e-14,3;CL:0000221,4.90e-14,44;CL:0000133,4.90e-14,44;CL:0002321,1.01e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.08e-22!73;UBERON:0005743!6.08e-22!73;UBERON:0004121!2.70e-21!102;UBERON:0000924!2.70e-21!102;UBERON:0006601!2.70e-21!102;UBERON:0002346!4.71e-21!71;UBERON:0003075!4.71e-21!71;UBERON:0007284!4.71e-21!71;UBERON:0000073!4.82e-21!75;UBERON:0001016!4.82e-21!75;UBERON:0000033!4.69e-20!63;UBERON:0001049!5.79e-20!52;UBERON:0005068!5.79e-20!52;UBERON:0006241!5.79e-20!52;UBERON:0007135!5.79e-20!52;UBERON:0002020!1.46e-18!34;UBERON:0000955!1.85e-17!50;UBERON:0006238!1.85e-17!50;UBERON:0002616!1.59e-16!49;UBERON:0003056!1.08e-15!49;UBERON:0002791!1.57e-14!29;UBERON:0003528!1.57e-14!29;UBERON:0001893!1.57e-14!29;UBERON:0003080!1.41e-12!40;UBERON:0002420!2.83e-12!8;UBERON:0007245!2.83e-12!8;UBERON:0010009!2.83e-12!8;UBERON:0010011!2.83e-12!8;UBERON:0000454!2.83e-12!8;UBERON:0007811!6.00e-12!86;UBERON:0002780!1.14e-11!39;UBERON:0001890!1.14e-11!39;UBERON:0006240!1.14e-11!39;UBERON:0000153!4.23e-10!94;UBERON:0002298!6.74e-09!6;UBERON:0003076!1.19e-08!12;UBERON:0003057!1.19e-08!12;UBERON:0000369!2.98e-08!5;UBERON:0002435!2.98e-08!5;UBERON:0000204!2.98e-08!5;UBERON:0010082!2.98e-08!5;UBERON:0002950!9.53e-07!4;UBERON:0001891!9.53e-07!4;UBERON:0009616!9.53e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0002020,3.02e-10,34;UBERON:0000369,7.70e-09,5;UBERON:0002435,7.70e-09,5;UBERON:0000204,7.70e-09,5;UBERON:0010082,7.70e-09,5;UBERON:0003528,1.82e-08,29;UBERON:0002791,1.82e-08,29;UBERON:0001893,1.82e-08,29;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.622137673850866,1.21505344498522,0.210324961351382,0,0.441737081903227,0.489963196859816,0.383381884072945,0.919218786610021,0,0.893811366596314,0.307213066512487,1.31886287730194,3.29355516968675,0.52091337055676,1.3959149950069,0.56276261003168,0.61119299110724,2.06240009831567,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0.900642406448441,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.622137673850866,1.21505344498522,0.210324961351382,0,0.441737081903227,0.489963196859816,0.383381884072945,0.919218786610021,0,0.893811366596314,0.307213066512487,1.31886287730194,3.29355516968675,0.52091337055676,1.3959149950069,0.56276261003168,0.61119299110724,2.06240009831567,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0,0,0,0,0.900642406448441,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:47098327..47098338,+ | |short_description=p@chr19:47098327..47098338,+ | ||
}} | }} |
Latest revision as of 06:16, 4 August 2015
Short description: | p@chr19:47098327..47098338, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47098327..47098338, + |
Coexpression cluster: | MCL_coexpression_mm9:941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 3.62e-30 | 3 |
CNS neuron (sensu Vertebrata) | 5.71e-27 | 23 |
neuroblast (sensu Vertebrata) | 5.71e-27 | 23 |
neuron | 9.03e-19 | 33 |
neuronal stem cell | 9.03e-19 | 33 |
neuroblast | 9.03e-19 | 33 |
electrically signaling cell | 9.03e-19 | 33 |
electrically responsive cell | 7.36e-16 | 39 |
electrically active cell | 7.36e-16 | 39 |
neural cell | 2.29e-14 | 43 |
striatum neuron | 4.25e-14 | 3 |
ectodermal cell | 4.90e-14 | 44 |
neurectodermal cell | 4.90e-14 | 44 |
embryonic cell | 1.01e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 1.15e-11 | 8 |
nuclear complex of neuraxis | 1.15e-11 | 8 |
aggregate regional part of brain | 1.15e-11 | 8 |
collection of basal ganglia | 1.15e-11 | 8 |
cerebral subcortex | 1.15e-11 | 8 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
gray matter | 3.02e-10 | 34 |
corpus striatum | 7.70e-09 | 5 |
striatum | 7.70e-09 | 5 |
ventral part of telencephalon | 7.70e-09 | 5 |
future corpus striatum | 7.70e-09 | 5 |
brain grey matter | 1.82e-08 | 29 |
regional part of telencephalon | 1.82e-08 | 29 |
telencephalon | 1.82e-08 | 29 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |