FFCP PHASE1:Mm9::chr7:133967627..133967649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:133967627..133967649,+ | |||
|description=CAGE_peak_at_chr7:133967627..133967649,+ | |description=CAGE_peak_at_chr7:133967627..133967649,+ | ||
|id=chr7:133967627..133967649,+ | |id=chr7:133967627..133967649,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.49e-19!23;CL:0000337!1.49e-19!23;CL:0000540!6.49e-14!33;CL:0000047!6.49e-14!33;CL:0000031!6.49e-14!33;CL:0000404!6.49e-14!33;CL:0000393!4.88e-11!39;CL:0000211!4.88e-11!39;CL:0000221!2.17e-10!44;CL:0000133!2.17e-10!44;CL:0002319!1.40e-09!43;CL:0000055!1.32e-07!50;CL:0002612!6.06e-07!3 | |ontology_enrichment_celltype=CL:0000117!1.49e-19!23;CL:0000337!1.49e-19!23;CL:0000540!6.49e-14!33;CL:0000047!6.49e-14!33;CL:0000031!6.49e-14!33;CL:0000404!6.49e-14!33;CL:0000393!4.88e-11!39;CL:0000211!4.88e-11!39;CL:0000221!2.17e-10!44;CL:0000133!2.17e-10!44;CL:0002319!1.40e-09!43;CL:0000055!1.32e-07!50;CL:0002612!6.06e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,7.56e-10,2;CL:0000117,1.45e-07,23;CL:0000337,1.45e-07,23;CL:0000120,3.64e-07,3;CL:0002612,4.77e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.89e-17!71;UBERON:0003075!4.89e-17!71;UBERON:0007284!4.89e-17!71;UBERON:0001049!5.49e-16!52;UBERON:0005068!5.49e-16!52;UBERON:0006241!5.49e-16!52;UBERON:0007135!5.49e-16!52;UBERON:0004121!1.06e-15!102;UBERON:0000924!1.06e-15!102;UBERON:0006601!1.06e-15!102;UBERON:0001017!1.68e-15!73;UBERON:0005743!1.68e-15!73;UBERON:0000033!4.50e-15!63;UBERON:0000073!7.11e-15!75;UBERON:0001016!7.11e-15!75;UBERON:0002020!1.65e-13!34;UBERON:0002616!3.73e-12!49;UBERON:0003056!8.35e-12!49;UBERON:0000955!8.50e-12!50;UBERON:0006238!8.50e-12!50;UBERON:0001948!1.69e-10!5;UBERON:0002315!1.69e-10!5;UBERON:0003076!7.82e-10!12;UBERON:0003057!7.82e-10!12;UBERON:0007811!3.91e-09!86;UBERON:0002240!1.22e-08!6;UBERON:0005174!1.22e-08!6;UBERON:0001137!1.22e-08!6;UBERON:0003080!1.49e-08!40;UBERON:0000153!8.90e-08!94;UBERON:0002780!1.15e-07!39;UBERON:0001890!1.15e-07!39;UBERON:0006240!1.15e-07!39;UBERON:0002791!1.41e-07!29;UBERON:0003528!1.41e-07!29;UBERON:0001893!1.41e-07!29;UBERON:0002298!2.51e-07!6;UBERON:0002257!6.06e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.80e-15,5;UBERON:0002315,9.80e-15,5;UBERON:0003076,8.01e-14,12;UBERON:0003057,8.01e-14,12;UBERON:0002240,1.84e-12,6;UBERON:0005174,1.84e-12,6;UBERON:0001137,1.84e-12,6;UBERON:0002256,7.56e-10,2;UBERON:0002257,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,1.10434270475807,0,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.569486723196412,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,5.65506108396329,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0.255715457330331,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.384341160854549,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.749431733813838,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,1.10434270475807,0,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.883885756421003,0.569486723196412,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,5.65506108396329,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0.255715457330331,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.384341160854549,0.187403449119458,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.749431733813838,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:133967627..133967649,+ | |short_description=p@chr7:133967627..133967649,+ | ||
}} | }} |
Latest revision as of 06:01, 4 August 2015
Short description: | p@chr7:133967627..133967649, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:133967627..133967649, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 7.56e-10 | 2 |
CNS neuron (sensu Vertebrata) | 1.45e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-07 | 23 |
granule cell | 3.64e-07 | 3 |
neuron of the ventral spinal cord | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 9.80e-15 | 5 |
gray matter of spinal cord | 9.80e-15 | 5 |
posterior neural tube | 8.01e-14 | 12 |
chordal neural plate | 8.01e-14 | 12 |
spinal cord | 1.84e-12 | 6 |
dorsal region element | 1.84e-12 | 6 |
dorsum | 1.84e-12 | 6 |
dorsal horn of spinal cord | 7.56e-10 | 2 |
ventral horn of spinal cord | 4.77e-07 | 3 |