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FFCP PHASE1:Mm9::chr11:83993294..83993351,+: Difference between revisions

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{{FFCP|EntrezGene=100503180,100503206,107476|HGNC=|MCL_coexpression_id=37|UniProt=Q5SWU9|association_with_transcript=0bp_to_ENSMUST00000136463_5end|description=CAGE_peak_1_at_Acaca_5end,CAGE_peak_1_at_LOC100503180_5end,CAGE_peak_1_at_LOC100503206_5end|id=chr11:83993294..83993351,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!4.08e-12!25;UBERON:0002330!4.08e-12!25;UBERON:0002107!9.28e-11!22;UBERON:0007499!9.28e-11!22;UBERON:0006925!9.28e-11!22;UBERON:0009497!9.28e-11!22;UBERON:0000015!9.28e-11!22;UBERON:0002423!9.28e-11!22;UBERON:0006235!9.28e-11!22;UBERON:0008835!9.28e-11!22;UBERON:0003894!9.28e-11!22;UBERON:0004161!9.28e-11!22;UBERON:0008836!9.28e-11!22;UBERON:0009569!2.20e-10!66;UBERON:0000466!3.83e-10!79;UBERON:0009854!5.19e-10!23;UBERON:0009856!5.19e-10!23;UBERON:0005256!1.24e-07!47;UBERON:0005172!1.37e-07!49;UBERON:0005173!1.37e-07!49;UBERON:0002417!1.37e-07!49;UBERON:0000916!1.37e-07!49;UBERON:0005177!2.29e-07!85;UBERON:0005157!6.34e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.08e-12,25;UBERON:0002330,4.08e-12,25;UBERON:0002107,9.28e-11,22;UBERON:0007499,9.28e-11,22;UBERON:0006925,9.28e-11,22;UBERON:0009497,9.28e-11,22;UBERON:0000015,9.28e-11,22;UBERON:0002423,9.28e-11,22;UBERON:0006235,9.28e-11,22;UBERON:0008835,9.28e-11,22;UBERON:0003894,9.28e-11,22;UBERON:0004161,9.28e-11,22;UBERON:0008836,9.28e-11,22;UBERON:0009569,2.20e-10,66;UBERON:0009854,5.19e-10,23;UBERON:0009856,5.19e-10,23;UBERON:0005177,3.64e-08,79;UBERON:0005256,5.52e-08,45;UBERON:0005172,1.37e-07,49;UBERON:0005173,1.37e-07,49;UBERON:0002417,1.37e-07,49;UBERON:0000916,1.37e-07,49;UBERON:0001041,4.40e-07,80|phase1_expression=11.2104192973356,4.53668029931169,4.54999239389536,4.23449895829562,4.50806156951712,10.5763941304491,8.87728034262997,4.51931632045517,17.8801677132617,18.2570330531155,16.7793608860995,23.6125590626196,6.67682846731702,6.03200776691082,13.9906099962578,10.3262386368811,6.99561878128147,12.9339487796877,12.3402990245165,10.1853516431527,14.2022294552287,19.2624445329717,16.9779862940308,12.3194165550923,12.6175104586944,5.7423196411502,3.4460959692726,7.11055067863434,13.8717096203153,12.0974462284767,12.4169085966971,45.0871778156338,38.7490816178279,0,5.19932915552294,8.97667084935859,9.18762103180661,5.4409111995798,4.6880120671428,7.32933241563318,3.52938892818609,2.04913645487534,2.42755176515577,15.485308610996,15.8148012702443,15.0508336772579,6.25913075478431,9.81113203712009,3.51497892375155,12.0546537426056,14.9785471139138,11.5002051491977,11.9125650300993,6.5282592781021,8.73843877770406,11.0621557495457,9.74213695791773,10.3134418455488,13.1505699558739,9.52183762689659,8.87363964908651,6.09920157724438,6.22506357277798,2.2497492932035,2.96659908770092,3.5524005747305,3.89480143673926,3.45796474789399,14.3091664985699,10.1254453748768,10.3059231062177,9.14083150092171,8.61387309711293,11.6366259254206,11.7889929352431,9.19218786610021,16.5173821499083,14.5563565417114,13.3637683932932,8.44072241473241,11.2529801630964,14.5855743755893,8.37548997004143,10.6924895906019,14.3630352910202,12.0797720044204,19.2201769078789,11.7431650869939,13.3278100266404,20.782179029366,15.9425468785923,36.9982267101996,16.319312008986,35.0807074564581,101.365121121836,59.5875759839456,20.6453297593675,16.7021716126497,11.950156211732,12.7202246823722,15.7744630149882,23.0987659345772,20.3844191765317,0,14.2884087067401,11.6545538118545,13.1436355703844,21.6949371466214,18.9024655062435,25.383605780085,17.3485326766136,24.3572382649713,26.0595511899346,27.5822432211299,25.0463946199051,51.5233024451669,14.0901131608593,157.468699685784,13.2691582792481,10.0295446967394,11.7046004784009,13.091631834651,11.1835056730873,14.9318206475889,13.6140359428746,9.70736809792647,11.3824368280624,10.1983464268879,9.65733725755292,16.6267609739353,12.3525162761029,12.1884721549478,9.73416193076748,10.9957646652042,11.4283424507758,14.4394724130304,12.8317598451399,15.5508713262616,14.9106427475868,73.2337658484929,21.7301139747715,16.5529515192101,11.884100567153,16.5775299619287,19.4584387572798,22.2917873295639,18.0844328400277,50.9645640355861,21.9879352791499,17.5868654556072,16.0115522989193,9.86380795924087,13.9023624612799,17.7608604926305,22.8418171412817,17.3159812132089,12.6398373716382,10.2939162845886,14.2081749697796,8.90640821902658,12.6644072389792,8.28285482720668,10.4167683657493,8.46086196513836,7.71335564436891,9.06882384526591,9.38956904898667,7.47298191149885,6.91151369636618,7.05920095540109,8.18794976413143,6.28659945928929,17.7835593385751,11.8101648509127,10.3042074796422,17.5966887168576,3.96502539580558,13.4869788998408,18.5560777965654,19.2756437644164,19.8455890436024,15.5296313959974,18.902133726814,19.2127882373685,9.01605216934572,7.74085087202851,6.53471542880701,7.56034593756373,8.57841983324129,8.08937467788799,15.561939590978,11.3510525754989,11.0007382552787,20.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:100503180,entrezgene:100503206,entrezgene:107476
|HGNC=
|MCL_coexpression_id=37
|TSSclassifier=NA
|UniProt=uniprot:Q5SWU9
|association_with_transcript=0bp_to_ENSMUST00000136463_5end
|cluster_id=chr11:83993294..83993351,+
|description=CAGE_peak_1_at_Acaca_5end,CAGE_peak_1_at_LOC100503180_5end,CAGE_peak_1_at_LOC100503206_5end
|id=chr11:83993294..83993351,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!4.08e-12!25;UBERON:0002330!4.08e-12!25;UBERON:0002107!9.28e-11!22;UBERON:0007499!9.28e-11!22;UBERON:0006925!9.28e-11!22;UBERON:0009497!9.28e-11!22;UBERON:0000015!9.28e-11!22;UBERON:0002423!9.28e-11!22;UBERON:0006235!9.28e-11!22;UBERON:0008835!9.28e-11!22;UBERON:0003894!9.28e-11!22;UBERON:0004161!9.28e-11!22;UBERON:0008836!9.28e-11!22;UBERON:0009569!2.20e-10!66;UBERON:0000466!3.83e-10!79;UBERON:0009854!5.19e-10!23;UBERON:0009856!5.19e-10!23;UBERON:0005256!1.24e-07!47;UBERON:0005172!1.37e-07!49;UBERON:0005173!1.37e-07!49;UBERON:0002417!1.37e-07!49;UBERON:0000916!1.37e-07!49;UBERON:0005177!2.29e-07!85;UBERON:0005157!6.34e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.08e-12,25;UBERON:0002330,4.08e-12,25;UBERON:0002107,9.28e-11,22;UBERON:0007499,9.28e-11,22;UBERON:0006925,9.28e-11,22;UBERON:0009497,9.28e-11,22;UBERON:0000015,9.28e-11,22;UBERON:0002423,9.28e-11,22;UBERON:0006235,9.28e-11,22;UBERON:0008835,9.28e-11,22;UBERON:0003894,9.28e-11,22;UBERON:0004161,9.28e-11,22;UBERON:0008836,9.28e-11,22;UBERON:0009569,2.20e-10,66;UBERON:0009854,5.19e-10,23;UBERON:0009856,5.19e-10,23;UBERON:0005177,3.64e-08,79;UBERON:0005256,5.52e-08,45;UBERON:0005172,1.37e-07,49;UBERON:0005173,1.37e-07,49;UBERON:0002417,1.37e-07,49;UBERON:0000916,1.37e-07,49;UBERON:0001041,4.40e-07,80
|phase1_expression=11.2104192973356,4.53668029931169,4.54999239389536,4.23449895829562,4.50806156951712,10.5763941304491,8.87728034262997,4.51931632045517,17.8801677132617,18.2570330531155,16.7793608860995,23.6125590626196,6.67682846731702,6.03200776691082,13.9906099962578,10.3262386368811,6.99561878128147,12.9339487796877,12.3402990245165,10.1853516431527,14.2022294552287,19.2624445329717,16.9779862940308,12.3194165550923,12.6175104586944,5.7423196411502,3.4460959692726,7.11055067863434,13.8717096203153,12.0974462284767,12.4169085966971,45.0871778156338,38.7490816178279,0,5.19932915552294,8.97667084935859,9.18762103180661,5.4409111995798,4.6880120671428,7.32933241563318,3.52938892818609,2.04913645487534,2.42755176515577,15.485308610996,15.8148012702443,15.0508336772579,6.25913075478431,9.81113203712009,3.51497892375155,12.0546537426056,14.9785471139138,11.5002051491977,11.9125650300993,6.5282592781021,8.73843877770406,11.0621557495457,9.74213695791773,10.3134418455488,13.1505699558739,9.52183762689659,8.87363964908651,6.09920157724438,6.22506357277798,2.2497492932035,2.96659908770092,3.5524005747305,3.89480143673926,3.45796474789399,14.3091664985699,10.1254453748768,10.3059231062177,9.14083150092171,8.61387309711293,11.6366259254206,11.7889929352431,9.19218786610021,16.5173821499083,14.5563565417114,13.3637683932932,8.44072241473241,11.2529801630964,14.5855743755893,8.37548997004143,10.6924895906019,14.3630352910202,12.0797720044204,19.2201769078789,11.7431650869939,13.3278100266404,20.782179029366,15.9425468785923,36.9982267101996,16.319312008986,35.0807074564581,101.365121121836,59.5875759839456,20.6453297593675,16.7021716126497,11.950156211732,12.7202246823722,15.7744630149882,23.0987659345772,20.3844191765317,0,14.2884087067401,11.6545538118545,13.1436355703844,21.6949371466214,18.9024655062435,25.383605780085,17.3485326766136,24.3572382649713,26.0595511899346,27.5822432211299,25.0463946199051,51.5233024451669,14.0901131608593,157.468699685784,13.2691582792481,10.0295446967394,11.7046004784009,13.091631834651,11.1835056730873,14.9318206475889,13.6140359428746,9.70736809792647,11.3824368280624,10.1983464268879,9.65733725755292,16.6267609739353,12.3525162761029,12.1884721549478,9.73416193076748,10.9957646652042,11.4283424507758,14.4394724130304,12.8317598451399,15.5508713262616,14.9106427475868,73.2337658484929,21.7301139747715,16.5529515192101,11.884100567153,16.5775299619287,19.4584387572798,22.2917873295639,18.0844328400277,50.9645640355861,21.9879352791499,17.5868654556072,16.0115522989193,9.86380795924087,13.9023624612799,17.7608604926305,22.8418171412817,17.3159812132089,12.6398373716382,10.2939162845886,14.2081749697796,8.90640821902658,12.6644072389792,8.28285482720668,10.4167683657493,8.46086196513836,7.71335564436891,9.06882384526591,9.38956904898667,7.47298191149885,6.91151369636618,7.05920095540109,8.18794976413143,6.28659945928929,17.7835593385751,11.8101648509127,10.3042074796422,17.5966887168576,3.96502539580558,13.4869788998408,18.5560777965654,19.2756437644164,19.8455890436024,15.5296313959974,18.902133726814,19.2127882373685,9.01605216934572,7.74085087202851,6.53471542880701,7.56034593756373,8.57841983324129,8.08937467788799,15.561939590978,11.3510525754989,11.0007382552787,20.1077382193123,11.270773567308,15.6811522440892,16.0980564349129,13.4660774189412,10.2443190141297,13.8753539100826,13.815888050041,12.7099078839455,102.869061599241,20.0214126859313,22.6042844380183,20.2375901146368,24.9517949307859,27.9765505312804,34.6291158422731,31.3588789821384,14.7543056365282,28.2798255583724,38.8174157623857,37.9583766621873,35.5722947350599,48.4951445658455,95.2600265801354,43.419916922703,23.4636551511588,17.4332098828846,16.4594626206446,18.1627241779451,15.4895563870411,15.7455881995307,19.5195785526531,29.6603144743854,24.748717624672,17.2742457926044,19.1345722388985,29.1676700194014,35.2277363006427,35.5836684110518,10.5553898757491,10.3342079925555,541.432464593959,495.306459616995,17.6605648986571,21.2153152731888,18.688583772941,26.2569764292548,13.2513452154828,10.5418460960092,12.7099804662351,15.7719406648684,15.5959071857676,14.1538265394416,15.382806663646,12.2747460322751,13.0444966722353,10.6036034419196,28.9557773824868,10.3278050127008,14.0082785044075,16.8269525431986,11.9470624505967,15.7807413500738,15.7208249621671,10.3732793865744,8.56375489354241,15.9866276930842,15.5056975900933,13.0872142611902,7.84294232446387,13.2735438333043,11.5960469432499,7.21948802737308,10.2131881726136,11.3438489239725,8.66703181344455,9.85950361145325,6.56158864476412,9.0968096977056,9.70839221552514,8.82948352432338,10.3255551548033,8.04961869282517,12.5701186891328,24.2382791823976,21.6362331772513,35.1021223081867,33.5436286648813,39.7220977383048,10.2018292820448,17.6154036909984,7.86006051670122,11.3512777379772,12.5932278611404,10.1718966782533,13.8061169998235,14.1842467388044,7.64902934972349,11.6159705428636,8.29199842826543,8.59203556213602,16.449471666219,16.6721963044016,21.8170788460039,22.3724476735482,20.7444435558869,18.7461441474901,18.1837602595739,20.9404753587224,18.79417112731,17.3975007664339,17.4744810992099,15.1011711504419,16.876766026624,24.6953009196941,29.1901201059672,25.8502872000891,24.9970918315456,29.5563953595767,38.6930980930873,30.9227674657288,24.4825505319186,9.79634473947353,19.0561702372754,12.2226039026144,14.9408946424464,16.6494826970758,12.1195626416572,9.37524506255757,9.45212973917294,11.8130746439333,9.90688486514998,8.26774718122092,7.89408833991995,9.33254863911196,7.83075244616512,23.579959895982,20.8666796171621,14.5336447707351,11.5840385291214,23.7623200659594,8.82107634620555,12.6374620744413,20.1506276334322,11.5361583928134,16.942555278512,9.66682996665071,12.6037012956667,10.4830441229649,10.2762377965596,7.55393897389701,7.42524750254986,6.75481804836331,7.70342095273148,7.24864436452548,18.4741478699834,20.3502685434526,15.8782253351345,16.0450433265074,14.0440818960748,12.869045591501,20.0022055021454,18.7491902087394,21.8225062522434,22.7427490587418,20.0248646913289,17.353623407519,17.9791694342174,17.4148414541244,19.3557530380417,18.0991602687568,20.859178670074,19.8696497077616,21.4284668417719,20.6078488188156,16.8005933668854,15.9728225543404,19.7902037656276,22.2380017447463,18.5395479418201,20.6459643255691,21.2196448532416,21.5717163379031,18.0619471414996,14.0285567914435,22.6592884617173,20.3904278517416,20.8707832016542,17.9726735775721,15.6254354894725,14.7388240983388,16.8430758080694,20.19787908054,16.0682198937828,14.7796250810075,12.7527309591232
|short_description=p1@Acaca,p1@LOC100503180,p1@LOC100503206
}}

Revision as of 05:12, 4 August 2015

Short description:p1@Acaca, p1@LOC100503180, p1@LOC100503206
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Acaca_5end, CAGE_peak_1_at_LOC100503180_5end, CAGE_peak_1_at_LOC100503206_5end
Coexpression cluster:MCL_coexpression_mm9:37
Association with transcript: 0bp_to_ENSMUST00000136463_5end
EntrezGene:100503180,100503206,107476
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Acacap1@LOC100503180p1@LOC100503206

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.78
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.98
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B913.87
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I345.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G638.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.05
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D913.33
Mouse Schwann, donor2.CNhs12573.11746-123F920.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C835.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F4101.37
Mouse hepatocyte, donor8.CNhs13091.11824-124F659.59
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.69
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D725.38
adrenal gland, embryo E14.CNhs11038.406-44C517.35
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I126.06
adrenal gland, embryo E18.CNhs11026.1262-18F527.58
adrenal gland, neonate N00.CNhs11191.1311-23C125.05
adrenal gland, neonate N25.CNhs11223.1377-27I351.52
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H1157.47
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A611.70
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.66
corpora quadrigemina, adult.CNhs10501.16-22A416.63
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.55
epididymis, adult.CNhs10490.58-23B214.91
eyeball, adult.CNhs10484.31-12G473.23
eyeball, embryo E12.CNhs11016.345-16C621.73
eyeball, embryo E14.CNhs10521.399-16E216.55
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D416.58
eyeball, neonate N00.CNhs11207.633-15C619.46
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G818.08
eyeball, neonate N16.CNhs11188.777-19A250.96
forelimb, embryo E11.CNhs10596.335-25E221.99
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E216.01
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B522.84
gonad, embryo E13.CNhs11044.1564-45I617.32
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.21
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F512.66
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C67.71
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E37.47
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D317.78
heart, neonate N30.CNhs11202.1390-42D211.81
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I518.56
intestine, embryo E13.CNhs11010.381-16D519.28
intestine, embryo E15.CNhs10602.976-16D819.85
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D318.90
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G111.35
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F820.11
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I215.68
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G713.47
kidney, neonate N10.CNhs11206.758-6D510.24
kidney, neonate N20.CNhs11113.832-19I113.88
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B2102.87
liver, embryo E12.CNhs10601.355-15F820.02
liver, embryo E13.CNhs10524.378-3H622.60
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D724.95
liver, embryo E16.CNhs10523.462-17F527.98
liver, embryo E17.CNhs10510.481-18A334.63
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F414.75
liver, neonate N03.CNhs11123.1345-25G228.28
liver, neonate N06.CNhs11101.684-20A838.82
liver, neonate N07.CNhs11103.716-20H237.96
liver, neonate N10.CNhs11115.751-24B935.57
liver, neonate N20.CNhs11220.823-25A348.50
liver, neonate N25.CNhs11198.1368-26H195.26
liver, neonate N30.CNhs11106.1382-42D143.42
lung, adult.CNhs10474.28-22B123.46
lung, embryo E12.CNhs10522.354-16G217.43
lung, embryo E14.CNhs10604.404-26F816.46
lung, embryo E15.CNhs11020.432-17C518.16
lung, embryo E16.CNhs10998.458-17B615.49
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C629.66
lung, neonate N06.CNhs11212.683-20E524.75
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E619.13
lung, neonate N20.CNhs11109.822-18A429.17
lung, neonate N25.CNhs11119.1359-25C735.23
lung, neonate N30.CNhs11133.1394-42H235.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B6541.43
mammary gland, adult pregnant day19.CNhs10476.588-5H2495.31
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A321.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I728.96
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I414.01
oviduct, adult pregnant day01.CNhs10500.988-6G616.83
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F415.78
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G915.51
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C324.24
skin, neonate N00.CNhs11124.650-25G421.64
skin, neonate N03.CNhs11215.662-22H335.10
skin, neonate N06.CNhs11097.693-20I533.54
skin, neonate N10.CNhs11108.762-6C439.72
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C917.62
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H113.81
spleen, neonate N25.CNhs11099.1354-25G314.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G816.67
stomach, embryo E16.CNhs11022.459-17D421.82
stomach, embryo E17.CNhs11006.1035-18D522.37
stomach, embryo E18.CNhs10999.1286-20C620.74
stomach, neonate N03.CNhs11193.1340-24B818.75
stomach, neonate N07.CNhs11210.718-18A918.18
stomach, neonate N25.CNhs11104.1355-25E420.94
stomach, neonate N30.CNhs11134.1386-42I118.79
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F515.10
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G524.70
testis, embryo E17.CNhs11029.486-18I529.19
testis, embryo E18.CNhs11027.503-18G525.85
testis, neonate N00.CNhs11189.1300-22B725.00
testis, neonate N07.CNhs11222.726-26I429.56
testis, neonate N10.CNhs11204.763-44D938.69
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E224.48
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I419.06
thymus, embryo E15.CNhs11005.430-45I212.22
thymus, embryo E16.CNhs11002.456-26C514.94
thymus, embryo E17.CNhs10581.478-18C116.65
thymus, embryo E18.CNhs10595.1273-19G412.12
thymus, neonate N02.CNhs11181.1541-43F89.38
thymus, neonate N03.CNhs11137.2104-43C79.45
thymus, neonate N06.CNhs11197.681-26C411.81
thymus, neonate N07.CNhs11211.713-19D39.91
thymus, neonate N10.CNhs11194.748-24E48.27
thymus, neonate N20.CNhs11186.820-7A27.89
thymus, neonate N25.CNhs11125.1362-25G79.33
thymus, neonate N30.CNhs11132.1393-42G27.83
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.58
urinary bladder, adult.CNhs10481.879-12E423.76
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E512.64
vagina, adult.CNhs10502.89-27D520.15
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I818.47
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B114.04
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.97
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I514.74
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C220.20
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D114.78
whole body, neonate N10.CNhs10518.761-6B412.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland4.08e-1225
exocrine system4.08e-1225
liver9.28e-1122
epithelial sac9.28e-1122
digestive gland9.28e-1122
epithelium of foregut-midgut junction9.28e-1122
anatomical boundary9.28e-1122
hepatobiliary system9.28e-1122
foregut-midgut junction9.28e-1122
hepatic diverticulum9.28e-1122
liver primordium9.28e-1122
septum transversum9.28e-1122
liver bud9.28e-1122
subdivision of trunk2.20e-1066
digestive tract diverticulum5.19e-1023
sac5.19e-1023
trunk region element3.64e-0879
trunk mesenchyme5.52e-0845
abdomen element1.37e-0749
abdominal segment element1.37e-0749
abdominal segment of trunk1.37e-0749
abdomen1.37e-0749
foregut4.40e-0780
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