FFCP PHASE1:Mm9::chr10:13837321..13837326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:13837321..13837326,+ | |||
|description=CAGE_peak_at_chr10:13837321..13837326,+ | |description=CAGE_peak_at_chr10:13837321..13837326,+ | ||
|id=chr10:13837321..13837326,+ | |id=chr10:13837321..13837326,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.33e-09,8;CL:0000893,3.02e-08,6;CL:0002489,3.02e-08,6;CL:0000898,3.02e-08,6;CL:0000809,3.02e-08,6;CL:0000810,3.02e-08,6;CL:0000895,3.02e-08,6;CL:0000808,3.02e-08,6;CL:0000894,3.02e-08,6;CL:0000806,3.02e-08,6;CL:0000807,3.02e-08,6;CL:0000805,3.02e-08,6;CL:0002425,3.02e-08,6;CL:0002436,3.02e-08,6;CL:0002427,3.02e-08,6;CL:0002428,3.02e-08,6;CL:0002429,3.02e-08,6;CL:0002433,3.02e-08,6;CL:0002431,3.02e-08,6;CL:0002432,3.02e-08,6;CL:0000791,3.89e-08,9;CL:0000789,3.89e-08,9;CL:0002420,3.89e-08,9;CL:0002419,3.89e-08,9;CL:0000790,3.89e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.09e-12,10;UBERON:0000411,1.09e-12,10;UBERON:0001950,1.09e-12,10;UBERON:0000956,3.32e-07,21;UBERON:0001869,3.32e-07,21;UBERON:0000203,3.32e-07,21;UBERON:0002619,4.57e-07,17;UBERON:0002370,6.16e-07,23;UBERON:0000974,6.16e-07,23;UBERON:0004807,6.16e-07,23;UBERON:0005058,6.16e-07,23;UBERON:0003351,6.16e-07,23;UBERON:0009113,6.16e-07,23;UBERON:0003295,6.16e-07,23;UBERON:0009722,6.16e-07,23;UBERON:0005562,6.16e-07,23;UBERON:0007690,6.16e-07,23 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.33575854382378,0.700837921786577,2.06597317506522,1.40788722151667,4.44722600011788,0,4.06838010876216,0.342401459862411,2.71003247498892,0.333109761815663,0,0,0.630924330716475,0.822686601634433,0.42438965179803,2.8064285749853,0,0.261199789138935,0.319984845586813,0.91763712426868,0,0.86152399231815,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,0.912392380975631,1.83546752161682,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0,0,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,2.16949371466214,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.647067399789637,0.441683036920787,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0.457500602818626,0,1.56441888173049,0.511430914660661,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0.758168275301024,0,0.130120442962704,0,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.56748166682099,0.292399974850665,0.658650345873152,0.939444931322602,0.630869845692382,0.514523061896422,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.329397909448022,1.00534083520108,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.969762435838129,0.280543279561274,0.189709611372772,0.295220295959204,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0,0.327726629431476,0.690739927463582,0.867894351489069,0,0,0,1.10374698521893,0.160550589987792,0.586058432961016,0,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,2.89189184779626,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.542816324353403,0.477489376012546,0,0.582961673259701,0.370850604021019,0.512612642393558,0,0,0.188368457004691,0.820165366326151,0.686334519619568,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,1.26404448251271,0.405450430580328,0.308132871494482,0,0,0.39736270956253,0.721172697119813,0.886137163047463,0.908698049533329,0.304827226619999,0.806609481094724,0.877120926657772,0.577271049841977,1.16876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,0.460325236507177,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0,0,0,0.666740183404846,1.03017528619447,0,0.758091635291392,1.01391719956096,0.377252682772152,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,1.16277133305863,0.376437521661322,0.338458431566706,0.182927972872773,0.526139422875686,0.679020569229309,1.12228454331548,0.237270036248348,0.29551344712669,0.818462086339379,0.464810523557898,0,0.749431733813838,0.467863216890817,0,0.382576664137687,0.661774257358546,0.231867835620421 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.33575854382378,0.700837921786577,2.06597317506522,1.40788722151667,4.44722600011788,0,4.06838010876216,0.342401459862411,2.71003247498892,0.333109761815663,0,0,0.630924330716475,0.822686601634433,0.42438965179803,2.8064285749853,0,0.261199789138935,0.319984845586813,0.91763712426868,0,0.86152399231815,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,0.912392380975631,1.83546752161682,0,0,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0,0,2.54805239706646,7.11066703153331,0.216491041011214,0.253359865475099,0,2.16949371466214,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.647067399789637,0.441683036920787,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0.457500602818626,0,1.56441888173049,0.511430914660661,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0.758168275301024,0,0.130120442962704,0,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.56748166682099,0.292399974850665,0.658650345873152,0.939444931322602,0.630869845692382,0.514523061896422,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.329397909448022,1.00534083520108,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.969762435838129,0.280543279561274,0.189709611372772,0.295220295959204,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0,0.327726629431476,0.690739927463582,0.867894351489069,0,0,0,1.10374698521893,0.160550589987792,0.586058432961016,0,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,2.89189184779626,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.26414703174326,0,0,0,0.18006109403131,0,0.643011105094777,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.542816324353403,0.477489376012546,0,0.582961673259701,0.370850604021019,0.512612642393558,0,0,0.188368457004691,0.820165366326151,0.686334519619568,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0.651021924219751,0.104859344425711,0,0.288030006257865,1.26404448251271,0.405450430580328,0.308132871494482,0,0,0.39736270956253,0.721172697119813,0.886137163047463,0.908698049533329,0.304827226619999,0.806609481094724,0.877120926657772,0.577271049841977,1.16876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,0.460325236507177,1.14579102687879,1.20297227640581,1.37016503954128,0.755393897389701,0.675022500231806,2.2516060161211,2.71885445390523,1.03552062350364,0,0,0.170733605754134,0,0,0,0.666740183404846,1.03017528619447,0,0.758091635291392,1.01391719956096,0.377252682772152,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,1.16277133305863,0.376437521661322,0.338458431566706,0.182927972872773,0.526139422875686,0.679020569229309,1.12228454331548,0.237270036248348,0.29551344712669,0.818462086339379,0.464810523557898,0,0.749431733813838,0.467863216890817,0,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr10:13837321..13837326,+ | |short_description=p@chr10:13837321..13837326,+ | ||
}} | }} |
Latest revision as of 04:08, 4 August 2015
Short description: | p@chr10:13837321..13837326, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13837321..13837326, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.33e-09 | 8 |
thymocyte | 3.02e-08 | 6 |
double negative thymocyte | 3.02e-08 | 6 |
naive T cell | 3.02e-08 | 6 |
double-positive, alpha-beta thymocyte | 3.02e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 3.02e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.02e-08 | 6 |
DN4 thymocyte | 3.02e-08 | 6 |
DN1 thymic pro-T cell | 3.02e-08 | 6 |
DN2 thymocyte | 3.02e-08 | 6 |
DN3 thymocyte | 3.02e-08 | 6 |
immature single positive thymocyte | 3.02e-08 | 6 |
early T lineage precursor | 3.02e-08 | 6 |
mature CD4 single-positive thymocyte | 3.02e-08 | 6 |
resting double-positive thymocyte | 3.02e-08 | 6 |
double-positive blast | 3.02e-08 | 6 |
CD69-positive double-positive thymocyte | 3.02e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 3.02e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.02e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 3.02e-08 | 6 |
mature alpha-beta T cell | 3.89e-08 | 9 |
alpha-beta T cell | 3.89e-08 | 9 |
immature T cell | 3.89e-08 | 9 |
mature T cell | 3.89e-08 | 9 |
immature alpha-beta T cell | 3.89e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.09e-12 | 10 |
visual cortex | 1.09e-12 | 10 |
neocortex | 1.09e-12 | 10 |
cerebral cortex | 3.32e-07 | 21 |
cerebral hemisphere | 3.32e-07 | 21 |
pallium | 3.32e-07 | 21 |
regional part of cerebral cortex | 4.57e-07 | 17 |
thymus | 6.16e-07 | 23 |
neck | 6.16e-07 | 23 |
respiratory system epithelium | 6.16e-07 | 23 |
hemolymphoid system gland | 6.16e-07 | 23 |
pharyngeal epithelium | 6.16e-07 | 23 |
thymic region | 6.16e-07 | 23 |
pharyngeal gland | 6.16e-07 | 23 |
entire pharyngeal arch endoderm | 6.16e-07 | 23 |
thymus primordium | 6.16e-07 | 23 |
early pharyngeal endoderm | 6.16e-07 | 23 |