FFCP PHASE1:Mm9::chr2:132771205..132771306,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=241639|HGNC=|MCL_coexpression_id=65|UniProt=|association_with_transcript=58bp_to_ENSMUST00000134937_5end|description=CAGE_peak_1_at_Fermt1_5end|id=chr2:132771205..132771306,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.01e-18!59;UBERON:0000160!1.30e-17!43;UBERON:0001007!2.09e-14!128;UBERON:0001555!2.09e-14!128;UBERON:0007026!2.09e-14!128;UBERON:0004119!6.33e-14!130;UBERON:0000925!6.33e-14!130;UBERON:0006595!6.33e-14!130;UBERON:0004921!1.01e-13!126;UBERON:0004185!1.01e-13!126;UBERON:0000344!4.12e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.86e-17,47;UBERON:0000160,1.99e-16,31;UBERON:0001007,2.07e-09,116;UBERON:0001555,2.07e-09,116;UBERON:0007026,2.07e-09,116;UBERON:0004119,7.04e-09,118;UBERON:0000925,7.04e-09,118;UBERON:0006595,7.04e-09,118;UBERON:0004921,8.21e-09,114;UBERON:0000344,6.90e-08,15;UBERON:0001242,3.19e-07,13;UBERON:0001262,3.19e-07,13;UBERON:0004786,3.19e-07,13|phase1_expression=0,4.18770489167233,5.0049916332849,5.14189159221611,10.0179145989269,6.71517087647559,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,2.71987118748791,4.5881856213434,5.7423196411502,3.87685796543167,1.939241094173,4.18051522804023,2.52030129759931,1.99557459589774,0,0,0,5.19932915552294,4.3221007793208,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,7.79367747640371,9.62767488805375,13.1436355703844,2.2836775943812,0,0,0.520455980298408,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,8.68553987709211,0,0,0,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.712875546952214,1.11966273549084,3.79084137650512,4.41927897361595,2.47228841629137,1.60931473103431,1.62055916824814,1.50704817835715,1.08858398642125,0.768682321709099,0.281105173679186,2.58703370739016,5.6047678162539,4.34943984385984,3.69497360744293,3.5071317188412,6.11703948296315,5.2237824978325,4.32142486456681,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0,12.8863325363681,6.08236303326152,1.91959425481711,2.78684006232526,4.38149368495117,5.24377164020691,8.00560957841533,7.03834816616469,4.74529061544512,6.42325923423642,7.54005626400809,6.16765063327568,8.96834800747953,4.49409704327111,5.83572734661674,5.57595565112228,2.0863469104839,1.5994791765362,5.63538678365402,2.44381593414377,3.87904974335251,2.38461787627083,6.5133633237985,10.9231509504906,8.63493003127561,8.88459580236964,0.296452627087149,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,0.568474235311454,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0.714130922658041,1.17080188714679,0.157635144106191,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,1.47529281905711,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.534196811001766,0.651547837414304,3.13443233647817,2.65490276679926,3.8844901784797,5.13950046840077,5.84675747243284,4.42952839321159,3.99665692327106,3.10113951801865,5.45300594216258,2.13898427030833,2.52829406348653,6.32511651449993,0,0,0.900305470156551,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,1.54369878638473,39.9024732118382,18.4069446433332,22.6776597729866,25.0681922406587,32.8281799490123,4.37221254944776,0,0,0.619160603889667,0,0,0,0,0,0,0,7.63736494412091,1.42351197111511,7.1161813494397,8.6404272657441,11.0816796887668,6.98760203987768,11.7331981354794,9.00922667406162,4.71160695571253,6.48074866458964,0.621339313086926,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,2.21207784439725,11.149886840959,12.8388696456034,8.96453678546786,6.62398773969681,3.9736270956253,3.12508168751919,4.57837534241189,2.3222283488074,2.97206545954499,2.52065462842101,3.31356794515158,1.6356013078856,2.33753804363138,8.84248496099324,0.221985953374065,0.358855426437903,0.335769232728157,18.3530114330581,0.750729901804728,3.47988086107804,29.5828363129111,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,3.52876981786201,3.19219898720825,2.56100408631201,2.91728060481953,1.46729213839588,2.02227859295016,2.22246727801615,1.03017528619447,1.28367683836726,1.26348605881899,1.77435509923168,1.88626341386076,1.96647165686753,2.17685518176556,1.83793500657962,1.42888107384922,2.31768651889711,3.8581844092741,1.64834360321323,1.76638704161277,3.08582327146874,1.77475806159337,2.62279808942053,1.88950341622027,1.88218760830661,1.4384483341585,2.19513567447327,1.57841826862706,1.35804113845862,2.80571135828869,1.54225523561426,1.28055827088233,1.22769312950907,1.70430525304563,3.08650577569826,1.49886346762768,1.87145286756327,4.94203424311086,1.53030665655075,2.20591419119516,0|short_description=p1@Fermt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241639 | |||
|HGNC= | |||
|MCL_coexpression_id=65 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=58bp_to_ENSMUST00000134937_5end | |||
|cluster_id=chr2:132771205..132771306,- | |||
|description=CAGE_peak_1_at_Fermt1_5end | |||
|id=chr2:132771205..132771306,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.01e-18!59;UBERON:0000160!1.30e-17!43;UBERON:0001007!2.09e-14!128;UBERON:0001555!2.09e-14!128;UBERON:0007026!2.09e-14!128;UBERON:0004119!6.33e-14!130;UBERON:0000925!6.33e-14!130;UBERON:0006595!6.33e-14!130;UBERON:0004921!1.01e-13!126;UBERON:0004185!1.01e-13!126;UBERON:0000344!4.12e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.86e-17,47;UBERON:0000160,1.99e-16,31;UBERON:0001007,2.07e-09,116;UBERON:0001555,2.07e-09,116;UBERON:0007026,2.07e-09,116;UBERON:0004119,7.04e-09,118;UBERON:0000925,7.04e-09,118;UBERON:0006595,7.04e-09,118;UBERON:0004921,8.21e-09,114;UBERON:0000344,6.90e-08,15;UBERON:0001242,3.19e-07,13;UBERON:0001262,3.19e-07,13;UBERON:0004786,3.19e-07,13 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,5.14189159221611,10.0179145989269,6.71517087647559,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,2.71987118748791,4.5881856213434,5.7423196411502,3.87685796543167,1.939241094173,4.18051522804023,2.52030129759931,1.99557459589774,0,0,0,5.19932915552294,4.3221007793208,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,7.79367747640371,9.62767488805375,13.1436355703844,2.2836775943812,0,0,0.520455980298408,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,8.68553987709211,0,0,0,0,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.712875546952214,1.11966273549084,3.79084137650512,4.41927897361595,2.47228841629137,1.60931473103431,1.62055916824814,1.50704817835715,1.08858398642125,0.768682321709099,0.281105173679186,2.58703370739016,5.6047678162539,4.34943984385984,3.69497360744293,3.5071317188412,6.11703948296315,5.2237824978325,4.32142486456681,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.630869845692382,0,12.8863325363681,6.08236303326152,1.91959425481711,2.78684006232526,4.38149368495117,5.24377164020691,8.00560957841533,7.03834816616469,4.74529061544512,6.42325923423642,7.54005626400809,6.16765063327568,8.96834800747953,4.49409704327111,5.83572734661674,5.57595565112228,2.0863469104839,1.5994791765362,5.63538678365402,2.44381593414377,3.87904974335251,2.38461787627083,6.5133633237985,10.9231509504906,8.63493003127561,8.88459580236964,0.296452627087149,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,1.84753190166605,0.568474235311454,0.651859905768103,0.848725428875941,1.40814148973101,0.670025029767263,0.714130922658041,1.17080188714679,0.157635144106191,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,1.47529281905711,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.534196811001766,0.651547837414304,3.13443233647817,2.65490276679926,3.8844901784797,5.13950046840077,5.84675747243284,4.42952839321159,3.99665692327106,3.10113951801865,5.45300594216258,2.13898427030833,2.52829406348653,6.32511651449993,0,0,0.900305470156551,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,1.54369878638473,39.9024732118382,18.4069446433332,22.6776597729866,25.0681922406587,32.8281799490123,4.37221254944776,0,0,0.619160603889667,0,0,0,0,0,0,0,7.63736494412091,1.42351197111511,7.1161813494397,8.6404272657441,11.0816796887668,6.98760203987768,11.7331981354794,9.00922667406162,4.71160695571253,6.48074866458964,0.621339313086926,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,2.21207784439725,11.149886840959,12.8388696456034,8.96453678546786,6.62398773969681,3.9736270956253,3.12508168751919,4.57837534241189,2.3222283488074,2.97206545954499,2.52065462842101,3.31356794515158,1.6356013078856,2.33753804363138,8.84248496099324,0.221985953374065,0.358855426437903,0.335769232728157,18.3530114330581,0.750729901804728,3.47988086107804,29.5828363129111,1.00314420807073,0,0,0,0,0,0,0,0,0,0.51776031175182,3.52876981786201,3.19219898720825,2.56100408631201,2.91728060481953,1.46729213839588,2.02227859295016,2.22246727801615,1.03017528619447,1.28367683836726,1.26348605881899,1.77435509923168,1.88626341386076,1.96647165686753,2.17685518176556,1.83793500657962,1.42888107384922,2.31768651889711,3.8581844092741,1.64834360321323,1.76638704161277,3.08582327146874,1.77475806159337,2.62279808942053,1.88950341622027,1.88218760830661,1.4384483341585,2.19513567447327,1.57841826862706,1.35804113845862,2.80571135828869,1.54225523561426,1.28055827088233,1.22769312950907,1.70430525304563,3.08650577569826,1.49886346762768,1.87145286756327,4.94203424311086,1.53030665655075,2.20591419119516,0 | |||
|short_description=p1@Fermt1 | |||
}} |
Revision as of 02:57, 4 August 2015
Short description: | p1@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:65 |
Association with transcript: | 58bp_to_ENSMUST00000134937_5end |
EntrezGene: | 241639 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.86e-17 | 47 |
intestine | 1.99e-16 | 31 |
digestive system | 2.07e-09 | 116 |
digestive tract | 2.07e-09 | 116 |
primitive gut | 2.07e-09 | 116 |
endoderm-derived structure | 7.04e-09 | 118 |
endoderm | 7.04e-09 | 118 |
presumptive endoderm | 7.04e-09 | 118 |
subdivision of digestive tract | 8.21e-09 | 114 |
mucosa | 6.90e-08 | 15 |
intestinal mucosa | 3.19e-07 | 13 |
wall of intestine | 3.19e-07 | 13 |
gastrointestinal system mucosa | 3.19e-07 | 13 |