FFCP PHASE1:Mm9::chr10:127906334..127906344,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2532|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127906334..127906344,+|id=chr10:127906334..127906344,+|ontology_enrichment_celltype=CL:0000117!6.32e-12!23;CL:0000337!6.32e-12!23;CL:0000393!7.17e-11!39;CL:0000211!7.17e-11!39;CL:0000540!6.95e-10!33;CL:0000047!6.95e-10!33;CL:0000031!6.95e-10!33;CL:0000404!6.95e-10!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-22,23;CL:0000337,1.34e-22,23;CL:0000540,2.32e-15,33;CL:0000047,2.32e-15,33;CL:0000031,2.32e-15,33;CL:0000404,2.32e-15,33;CL:0000393,1.76e-14,39;CL:0000211,1.76e-14,39;CL:0002319,2.32e-10,43;CL:0000221,5.43e-10,44;CL:0000133,5.43e-10,44;CL:0002321,6.53e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.29e-11!73;UBERON:0005743!3.29e-11!73;UBERON:0000073!2.06e-10!75;UBERON:0001016!2.06e-10!75;UBERON:0002020!9.43e-10!34;UBERON:0001049!1.06e-09!52;UBERON:0005068!1.06e-09!52;UBERON:0006241!1.06e-09!52;UBERON:0007135!1.06e-09!52;UBERON:0002616!9.95e-09!49;UBERON:0002346!1.23e-08!71;UBERON:0003075!1.23e-08!71;UBERON:0007284!1.23e-08!71;UBERON:0002780!2.58e-08!39;UBERON:0001890!2.58e-08!39;UBERON:0006240!2.58e-08!39;UBERON:0004121!3.47e-08!102;UBERON:0000924!3.47e-08!102;UBERON:0006601!3.47e-08!102;UBERON:0000955!4.25e-08!50;UBERON:0006238!4.25e-08!50;UBERON:0003080!5.09e-08!40;UBERON:0002791!2.31e-07!29;UBERON:0003528!2.31e-07!29;UBERON:0001893!2.31e-07!29;UBERON:0003056!5.16e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.14e-18,34;UBERON:0000073,3.87e-16,54;UBERON:0001017,6.03e-14,73;UBERON:0001016,2.54e-13,75;UBERON:0003528,3.52e-13,29;UBERON:0002791,3.52e-13,29;UBERON:0001893,3.52e-13,29;UBERON:0001049,7.60e-13,52;UBERON:0005068,7.60e-13,52;UBERON:0006241,7.60e-13,52;UBERON:0007135,7.60e-13,52;UBERON:0002780,9.21e-11,39;UBERON:0001890,9.21e-11,39;UBERON:0006240,9.21e-11,39;UBERON:0003080,2.37e-10,40;UBERON:0004121,3.93e-10,95;UBERON:0000924,3.93e-10,95;UBERON:0006601,3.93e-10,95;UBERON:0002346,6.35e-10,64;UBERON:0003075,6.35e-10,64;UBERON:0007284,6.35e-10,64;UBERON:0002616,3.74e-09,46;UBERON:0000955,7.75e-09,47;UBERON:0006238,7.75e-09,47;UBERON:0010371,1.26e-08,73;UBERON:0000956,2.12e-08,21;UBERON:0001869,2.12e-08,21;UBERON:0000203,2.12e-08,21;UBERON:0003056,2.70e-08,49;UBERON:0001948,2.89e-07,5;UBERON:0002315,2.89e-07,5;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.34243593645101,0.159544317990673,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.425216450755349,0.198581902401771,0,0.47997726838022,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.755380907853464,0.304130793658544,0.917733760808408,0,0.436050312760893,0,0,0.419959264876088,0,0,0,2.35265659399725,0.771778308107841,1.14613375975503,1.03134418455488,1.41621522601718,2.64495489636016,2.53532561402472,0,0.889294796111139,0,2.96659908770092,1.4209602298922,0.898800331555214,0.768436610643109,2.48855069540346,4.72520784160917,1.68259969081106,1.14260393761521,2.65042249141936,0.979926393719632,2.68367318851062,0,2.20231761998777,2.17068474744819,2.30409799884365,0.923204014111357,3.20206752608434,2.08365348222704,2.51264699101243,2.25105044012672,1.37518422999129,2.65165726926301,1.85083185038834,1.3047961207771,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0,0,0.702222100658759,1.1930122580464,0.259786004602869,0,0.281686839553361,2.56652954828636,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,0.578397427679647,0,0.970601099684455,0.441683036920787,1.45462575940567,0,0.585561594023094,1.04723353406728,0.255457055208591,0.239630249011841,0.599902730993408,0,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,1.27857728665165,0.62336413367868,0.973447578406546,0.81471491080253,0.124406970610093,0.758168275301024,0.210441855886474,0.260240885925407,0,0.540186389416048,0.60281927134286,0.748401490664606,1.15302348256365,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.983821158737019,0.771335564436891,0.697601834251224,0.268273401399619,1.05088808130453,0.329119699826961,0.985004784474571,0.243206428637567,0.877199924551994,0.658650345873152,0.402619256281115,0.420579897128254,1.64647379806855,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,0.128867461322093,0,1.11189021922435,0.38045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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2532 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:127906334..127906344,+ | |||
|description=CAGE_peak_at_chr10:127906334..127906344,+ | |||
|id=chr10:127906334..127906344,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.32e-12!23;CL:0000337!6.32e-12!23;CL:0000393!7.17e-11!39;CL:0000211!7.17e-11!39;CL:0000540!6.95e-10!33;CL:0000047!6.95e-10!33;CL:0000031!6.95e-10!33;CL:0000404!6.95e-10!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-22,23;CL:0000337,1.34e-22,23;CL:0000540,2.32e-15,33;CL:0000047,2.32e-15,33;CL:0000031,2.32e-15,33;CL:0000404,2.32e-15,33;CL:0000393,1.76e-14,39;CL:0000211,1.76e-14,39;CL:0002319,2.32e-10,43;CL:0000221,5.43e-10,44;CL:0000133,5.43e-10,44;CL:0002321,6.53e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.29e-11!73;UBERON:0005743!3.29e-11!73;UBERON:0000073!2.06e-10!75;UBERON:0001016!2.06e-10!75;UBERON:0002020!9.43e-10!34;UBERON:0001049!1.06e-09!52;UBERON:0005068!1.06e-09!52;UBERON:0006241!1.06e-09!52;UBERON:0007135!1.06e-09!52;UBERON:0002616!9.95e-09!49;UBERON:0002346!1.23e-08!71;UBERON:0003075!1.23e-08!71;UBERON:0007284!1.23e-08!71;UBERON:0002780!2.58e-08!39;UBERON:0001890!2.58e-08!39;UBERON:0006240!2.58e-08!39;UBERON:0004121!3.47e-08!102;UBERON:0000924!3.47e-08!102;UBERON:0006601!3.47e-08!102;UBERON:0000955!4.25e-08!50;UBERON:0006238!4.25e-08!50;UBERON:0003080!5.09e-08!40;UBERON:0002791!2.31e-07!29;UBERON:0003528!2.31e-07!29;UBERON:0001893!2.31e-07!29;UBERON:0003056!5.16e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.14e-18,34;UBERON:0000073,3.87e-16,54;UBERON:0001017,6.03e-14,73;UBERON:0001016,2.54e-13,75;UBERON:0003528,3.52e-13,29;UBERON:0002791,3.52e-13,29;UBERON:0001893,3.52e-13,29;UBERON:0001049,7.60e-13,52;UBERON:0005068,7.60e-13,52;UBERON:0006241,7.60e-13,52;UBERON:0007135,7.60e-13,52;UBERON:0002780,9.21e-11,39;UBERON:0001890,9.21e-11,39;UBERON:0006240,9.21e-11,39;UBERON:0003080,2.37e-10,40;UBERON:0004121,3.93e-10,95;UBERON:0000924,3.93e-10,95;UBERON:0006601,3.93e-10,95;UBERON:0002346,6.35e-10,64;UBERON:0003075,6.35e-10,64;UBERON:0007284,6.35e-10,64;UBERON:0002616,3.74e-09,46;UBERON:0000955,7.75e-09,47;UBERON:0006238,7.75e-09,47;UBERON:0010371,1.26e-08,73;UBERON:0000956,2.12e-08,21;UBERON:0001869,2.12e-08,21;UBERON:0000203,2.12e-08,21;UBERON:0003056,2.70e-08,49;UBERON:0001948,2.89e-07,5;UBERON:0002315,2.89e-07,5;UBERON:0002021,5.28e-07,10;UBERON:0000411,5.28e-07,10;UBERON:0001950,5.28e-07,10 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.34243593645101,0.159544317990673,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.425216450755349,0.198581902401771,0,0.47997726838022,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.755380907853464,0.304130793658544,0.917733760808408,0,0.436050312760893,0,0,0.419959264876088,0,0,0,2.35265659399725,0.771778308107841,1.14613375975503,1.03134418455488,1.41621522601718,2.64495489636016,2.53532561402472,0,0.889294796111139,0,2.96659908770092,1.4209602298922,0.898800331555214,0.768436610643109,2.48855069540346,4.72520784160917,1.68259969081106,1.14260393761521,2.65042249141936,0.979926393719632,2.68367318851062,0,2.20231761998777,2.17068474744819,2.30409799884365,0.923204014111357,3.20206752608434,2.08365348222704,2.51264699101243,2.25105044012672,1.37518422999129,2.65165726926301,1.85083185038834,1.3047961207771,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0.539703191637817,0,0,0.702222100658759,1.1930122580464,0.259786004602869,0,0.281686839553361,2.56652954828636,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,0.578397427679647,0,0.970601099684455,0.441683036920787,1.45462575940567,0,0.585561594023094,1.04723353406728,0.255457055208591,0.239630249011841,0.599902730993408,0,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,1.27857728665165,0.62336413367868,0.973447578406546,0.81471491080253,0.124406970610093,0.758168275301024,0.210441855886474,0.260240885925407,0,0.540186389416048,0.60281927134286,0.748401490664606,1.15302348256365,0.562210347358373,0.258703370739016,0.431135985865684,0.378212160335639,0.703804496655795,0,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.983821158737019,0.771335564436891,0.697601834251224,0.268273401399619,1.05088808130453,0.329119699826961,0.985004784474571,0.243206428637567,0.877199924551994,0.658650345873152,0.402619256281115,0.420579897128254,1.64647379806855,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,0.128867461322093,0,1.11189021922435,0.380451252225118,1.42358718463353,0,1.00534083520108,0.994782360205754,0,0.898819408654221,0.648414149624083,0.199141273254367,0.569003702859245,0.913988100877831,0,0.407302655690628,0.581857461502877,0.911765658574141,0.379419222745544,0.442830443938806,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.648540907100142,0.274561413188081,12.9391385874619,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.162964976442026,0.509235257325564,0.704070744865506,0.167506257441816,0,0.975668239288994,1.10344600874334,0.8858587585951,0.478364305972461,1.96635977658886,0.863424909329478,0.578596234326046,6.03165135757089,2.17562273527484,1.47529281905711,0.551873492609465,0.321101179975584,0.468846746368813,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.445597348164788,0,1.21443210502468,0.584511715822624,0.790575555893047,0,0.425820255624806,0.712262414669021,1.14020871547503,0.494910368917606,0,0.728341908464944,0.604647113929502,0.754420319023592,0.590603785761546,0,0,0.727067458955011,1.06949213515416,1.26414703174326,0,0,0.680879211507576,0.18006109403131,0.646793418913773,0.428674070063185,0.532020700926821,1.60531935841864,1.31639216481697,0.913394847343798,0.469343416127421,0,0.220528398054962,0,0.322928853391811,0.241251699712623,0.596861720015682,0.164140899745061,1.1659233465194,0.741701208042039,0.341741761595705,0.412773735926445,0.370389054739423,0.941842285023455,1.6403307326523,0.228778173206523,0.849892149969277,0.279902904647316,0.276399947608848,0,0.158167996790568,0.609958401380546,0.324016022465404,1.04544148007234,0.655087691238533,0.404593039154462,0.495920734352016,0.26175594198403,0.518459893167171,0.621339313086926,1.12738587736838,0.299033092087958,0,0.194451188344048,0.387479470433193,1.18269287843545,0.352071715937262,0.39061315453185,0.314578033277133,1.69108884578204,0.864090018773596,0.316011120628178,0.405450430580328,0.821687657318618,0.25984164595559,0.895133478337407,0.39736270956253,0.120195449519969,1.47689527174577,0.706765149637033,0.533447646584999,0.604957110821043,0.682205165178267,0.865906574762965,0.233753804363138,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,2.30162618253588,2.86447756719698,1.3748254587495,0,0.755393897389701,2.02506750069542,3.60256962579376,2.71885445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| |||
|short_description=p@chr10:127906334..127906344,+ | |||
}} |
Latest revision as of 02:50, 4 August 2015
Short description: | p@chr10:127906334..127906344, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127906334..127906344, + |
Coexpression cluster: | MCL_coexpression_mm9:2532 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-22 | 23 |
neuron | 2.32e-15 | 33 |
neuronal stem cell | 2.32e-15 | 33 |
neuroblast | 2.32e-15 | 33 |
electrically signaling cell | 2.32e-15 | 33 |
electrically responsive cell | 1.76e-14 | 39 |
electrically active cell | 1.76e-14 | 39 |
neural cell | 2.32e-10 | 43 |
ectodermal cell | 5.43e-10 | 44 |
neurectodermal cell | 5.43e-10 | 44 |
embryonic cell | 6.53e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.14e-18 | 34 |
regional part of nervous system | 3.87e-16 | 54 |
central nervous system | 6.03e-14 | 73 |
nervous system | 2.54e-13 | 75 |
brain grey matter | 3.52e-13 | 29 |
regional part of telencephalon | 3.52e-13 | 29 |
telencephalon | 3.52e-13 | 29 |
neural tube | 7.60e-13 | 52 |
neural rod | 7.60e-13 | 52 |
future spinal cord | 7.60e-13 | 52 |
neural keel | 7.60e-13 | 52 |
regional part of forebrain | 9.21e-11 | 39 |
forebrain | 9.21e-11 | 39 |
future forebrain | 9.21e-11 | 39 |
anterior neural tube | 2.37e-10 | 40 |
ectoderm-derived structure | 3.93e-10 | 95 |
ectoderm | 3.93e-10 | 95 |
presumptive ectoderm | 3.93e-10 | 95 |
neurectoderm | 6.35e-10 | 64 |
neural plate | 6.35e-10 | 64 |
presumptive neural plate | 6.35e-10 | 64 |
regional part of brain | 3.74e-09 | 46 |
brain | 7.75e-09 | 47 |
future brain | 7.75e-09 | 47 |
ecto-epithelium | 1.26e-08 | 73 |
cerebral cortex | 2.12e-08 | 21 |
cerebral hemisphere | 2.12e-08 | 21 |
pallium | 2.12e-08 | 21 |
pre-chordal neural plate | 2.70e-08 | 49 |
regional part of spinal cord | 2.89e-07 | 5 |
gray matter of spinal cord | 2.89e-07 | 5 |
occipital lobe | 5.28e-07 | 10 |
visual cortex | 5.28e-07 | 10 |
neocortex | 5.28e-07 | 10 |