FFCP PHASE1:Mm9::chr16:77421892..77421903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=437 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:77421892..77421903,+ | |||
|description=CAGE_peak_at_chr16:77421892..77421903,+ | |description=CAGE_peak_at_chr16:77421892..77421903,+ | ||
|id=chr16:77421892..77421903,+ | |id=chr16:77421892..77421903,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.67e-11!23;CL:0000337!6.67e-11!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.67e-12,23;CL:0000337,4.67e-12,23;CL:0000540,1.83e-08,33;CL:0000047,1.83e-08,33;CL:0000031,1.83e-08,33;CL:0000404,1.83e-08,33;CL:0002609,3.14e-08,6;CL:0000393,3.49e-07,39;CL:0000211,3.49e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.58e-12!34;UBERON:0001049!6.47e-10!52;UBERON:0005068!6.47e-10!52;UBERON:0006241!6.47e-10!52;UBERON:0007135!6.47e-10!52;UBERON:0000033!7.90e-09!63;UBERON:0002791!1.12e-08!29;UBERON:0003528!1.12e-08!29;UBERON:0001893!1.12e-08!29;UBERON:0001017!1.87e-08!73;UBERON:0005743!1.87e-08!73;UBERON:0002346!4.99e-08!71;UBERON:0003075!4.99e-08!71;UBERON:0007284!4.99e-08!71;UBERON:0000073!6.25e-08!75;UBERON:0001016!6.25e-08!75;UBERON:0000955!1.56e-07!50;UBERON:0006238!1.56e-07!50;UBERON:0003056!1.72e-07!49;UBERON:0002616!3.81e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.05e-11,34;UBERON:0003528,1.16e-09,29;UBERON:0002791,1.16e-09,29;UBERON:0001893,1.16e-09,29;UBERON:0000956,9.07e-09,21;UBERON:0001869,9.07e-09,21;UBERON:0000203,9.07e-09,21;UBERON:0001049,1.16e-07,52;UBERON:0005068,1.16e-07,52;UBERON:0006241,1.16e-07,52;UBERON:0007135,1.16e-07,52;UBERON:0000073,2.24e-07,54;UBERON:0001017,2.72e-07,73;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0001016,4.29e-07,75;UBERON:0003080,4.78e-07,40 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,0.285650984403804,0.441737081903227,0.857435594504678,0.287536413054709,0.919218786610021,0,0.255374676170375,0.307213066512487,0.395658863190582,0.0914876436024097,1.04182674111352,0.279182999001381,0,0.45839474333043,1.17851434189467,0.427115042397309,0.745597783301202,0,0,0,0,0,0,0,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0,0.973447578406546,0.101839363850316,0,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,5.04232600658494,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.749132059759059,0.512201219238954,0.746661096422973,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.953744759789284,0.726732083161643,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.711810108745045,0.492522411877817,0,0.464810523557898,0.578719832943424,1.49886346762768,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,1.03689612308478,0.540023753326763,1.05162480675691,0.285650984403804,0.441737081903227,0.857435594504678,0.287536413054709,0.919218786610021,0,0.255374676170375,0.307213066512487,0.395658863190582,0.0914876436024097,1.04182674111352,0.279182999001381,0,0.45839474333043,1.17851434189467,0.427115042397309,0.745597783301202,0,0,0,0,0,0,0,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0,0.973447578406546,0.101839363850316,0,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,5.04232600658494,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0,0,0,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0,0.749132059759059,0.512201219238954,0.746661096422973,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0,0.953744759789284,0.726732083161643,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.711810108745045,0.492522411877817,0,0.464810523557898,0.578719832943424,1.49886346762768,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr16:77421892..77421903,+ | |short_description=p@chr16:77421892..77421903,+ | ||
}} | }} |
Latest revision as of 02:16, 4 August 2015
Short description: | p@chr16:77421892..77421903, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:77421892..77421903, + |
Coexpression cluster: | MCL_coexpression_mm9:437 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.67e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.67e-12 | 23 |
neuron | 1.83e-08 | 33 |
neuronal stem cell | 1.83e-08 | 33 |
neuroblast | 1.83e-08 | 33 |
electrically signaling cell | 1.83e-08 | 33 |
neuron of cerebral cortex | 3.14e-08 | 6 |
electrically responsive cell | 3.49e-07 | 39 |
electrically active cell | 3.49e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.05e-11 | 34 |
brain grey matter | 1.16e-09 | 29 |
regional part of telencephalon | 1.16e-09 | 29 |
telencephalon | 1.16e-09 | 29 |
cerebral cortex | 9.07e-09 | 21 |
cerebral hemisphere | 9.07e-09 | 21 |
pallium | 9.07e-09 | 21 |
neural tube | 1.16e-07 | 52 |
neural rod | 1.16e-07 | 52 |
future spinal cord | 1.16e-07 | 52 |
neural keel | 1.16e-07 | 52 |
regional part of nervous system | 2.24e-07 | 54 |
central nervous system | 2.72e-07 | 73 |
regional part of forebrain | 3.17e-07 | 39 |
forebrain | 3.17e-07 | 39 |
future forebrain | 3.17e-07 | 39 |
nervous system | 4.29e-07 | 75 |
anterior neural tube | 4.78e-07 | 40 |