FFCP PHASE1:Mm9::chr19:40562058..40562081,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=338|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:40562058..40562081,-|id=chr19:40562058..40562081,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.88e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.32e-09!66;UBERON:0002107!9.18e-09!22;UBERON:0007499!9.18e-09!22;UBERON:0006925!9.18e-09!22;UBERON:0009497!9.18e-09!22;UBERON:0000015!9.18e-09!22;UBERON:0002423!9.18e-09!22;UBERON:0006235!9.18e-09!22;UBERON:0008835!9.18e-09!22;UBERON:0003894!9.18e-09!22;UBERON:0004161!9.18e-09!22;UBERON:0008836!9.18e-09!22;UBERON:0003914!9.45e-09!47;UBERON:0005177!3.91e-08!85;UBERON:0009854!4.41e-08!23;UBERON:0009856!4.41e-08!23;UBERON:0002365!6.35e-08!25;UBERON:0002330!6.35e-08!25;UBERON:0005172!1.50e-07!49;UBERON:0005173!1.50e-07!49;UBERON:0002417!1.50e-07!49;UBERON:0000916!1.50e-07!49;UBERON:0002100!9.76e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.41e-18,49;UBERON:0005173,1.41e-18,49;UBERON:0002417,1.41e-18,49;UBERON:0000916,1.41e-18,49;UBERON:0002107,2.02e-18,22;UBERON:0007499,2.02e-18,22;UBERON:0006925,2.02e-18,22;UBERON:0009497,2.02e-18,22;UBERON:0000015,2.02e-18,22;UBERON:0002423,2.02e-18,22;UBERON:0006235,2.02e-18,22;UBERON:0008835,2.02e-18,22;UBERON:0003894,2.02e-18,22;UBERON:0004161,2.02e-18,22;UBERON:0008836,2.02e-18,22;UBERON:0009854,1.70e-17,23;UBERON:0009856,1.70e-17,23;UBERON:0005177,2.05e-16,79;UBERON:0002365,7.18e-16,25;UBERON:0002330,7.18e-16,25;UBERON:0009569,1.21e-15,66;UBERON:0003104,1.43e-15,61;UBERON:0009142,1.43e-15,61;UBERON:0002100,9.69e-14,90;UBERON:0003914,9.67e-10,47;UBERON:0002113,2.33e-09,14;UBERON:0003918,2.33e-09,14;UBERON:0011143,2.33e-09,14;UBERON:0005095,2.33e-09,14;UBERON:0007687,2.33e-09,14;UBERON:0006554,6.35e-09,18;UBERON:0005256,7.45e-09,45;UBERON:0001008,2.21e-08,19;UBERON:0000489,1.87e-07,21|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.319984845586813,0,0,0.86152399231815,0.861884930743556,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,2.68952813725088,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,3.2382191498269,1.94932925234301,4.03224198387602,3.23022166303029,0,0,0,0.281686839553361,0,0,0,0,0,0,4.68153906848146,0,0,0,0,0,0,0,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.509196819251581,0.870848794270651,0,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.804820204198858,1.16765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.939444931322602,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.216138049874694,0,0,0,2.25415471346161,0.407302655690628,1.93952487167626,1.61312385747733,5.75452487830741,12.251642282307,11.303908404579,7.52722699922983,4.15033677922008,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0,1.72617682470486,0.162135226775035,1.64736847912849,11.5014565221884,4.09355042435354,1.5601883655728,1.01031551178845,1.25578189465339,1.92977408545347,0.184753190166605,0,0,0,0.234690248288502,0.837531287209079,0.714130922658041,1.36593553500459,0.630540576424764,0.8858587585951,0.159454768657487,0.655453258862952,1.20879487306127,0.867894351489069,0,0,0,0.551873492609465,0.321101179975584,0,0,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0,0,0,0,1.18586333383957,0,0.425820255624806,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.404593039154462,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.578719832943424,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr19:40562058..40562081,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=338 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:40562058..40562081,- | |||
|description=CAGE_peak_at_chr19:40562058..40562081,- | |||
|id=chr19:40562058..40562081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.88e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.32e-09!66;UBERON:0002107!9.18e-09!22;UBERON:0007499!9.18e-09!22;UBERON:0006925!9.18e-09!22;UBERON:0009497!9.18e-09!22;UBERON:0000015!9.18e-09!22;UBERON:0002423!9.18e-09!22;UBERON:0006235!9.18e-09!22;UBERON:0008835!9.18e-09!22;UBERON:0003894!9.18e-09!22;UBERON:0004161!9.18e-09!22;UBERON:0008836!9.18e-09!22;UBERON:0003914!9.45e-09!47;UBERON:0005177!3.91e-08!85;UBERON:0009854!4.41e-08!23;UBERON:0009856!4.41e-08!23;UBERON:0002365!6.35e-08!25;UBERON:0002330!6.35e-08!25;UBERON:0005172!1.50e-07!49;UBERON:0005173!1.50e-07!49;UBERON:0002417!1.50e-07!49;UBERON:0000916!1.50e-07!49;UBERON:0002100!9.76e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.41e-18,49;UBERON:0005173,1.41e-18,49;UBERON:0002417,1.41e-18,49;UBERON:0000916,1.41e-18,49;UBERON:0002107,2.02e-18,22;UBERON:0007499,2.02e-18,22;UBERON:0006925,2.02e-18,22;UBERON:0009497,2.02e-18,22;UBERON:0000015,2.02e-18,22;UBERON:0002423,2.02e-18,22;UBERON:0006235,2.02e-18,22;UBERON:0008835,2.02e-18,22;UBERON:0003894,2.02e-18,22;UBERON:0004161,2.02e-18,22;UBERON:0008836,2.02e-18,22;UBERON:0009854,1.70e-17,23;UBERON:0009856,1.70e-17,23;UBERON:0005177,2.05e-16,79;UBERON:0002365,7.18e-16,25;UBERON:0002330,7.18e-16,25;UBERON:0009569,1.21e-15,66;UBERON:0003104,1.43e-15,61;UBERON:0009142,1.43e-15,61;UBERON:0002100,9.69e-14,90;UBERON:0003914,9.67e-10,47;UBERON:0002113,2.33e-09,14;UBERON:0003918,2.33e-09,14;UBERON:0011143,2.33e-09,14;UBERON:0005095,2.33e-09,14;UBERON:0007687,2.33e-09,14;UBERON:0006554,6.35e-09,18;UBERON:0005256,7.45e-09,45;UBERON:0001008,2.21e-08,19;UBERON:0000489,1.87e-07,21 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.319984845586813,0,0,0.86152399231815,0.861884930743556,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,2.68952813725088,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,3.2382191498269,1.94932925234301,4.03224198387602,3.23022166303029,0,0,0,0.281686839553361,0,0,0,0,0,0,4.68153906848146,0,0,0,0,0,0,0,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.509196819251581,0.870848794270651,0,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0.804820204198858,1.16765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.939444931322602,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0,0,0.444756087689741,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0.216138049874694,0,0,0,2.25415471346161,0.407302655690628,1.93952487167626,1.61312385747733,5.75452487830741,12.251642282307,11.303908404579,7.52722699922983,4.15033677922008,0,0,0.224862112384854,0.202860121388503,0.482354319504834,0,1.72617682470486,0.162135226775035,1.64736847912849,11.5014565221884,4.09355042435354,1.5601883655728,1.01031551178845,1.25578189465339,1.92977408545347,0.184753190166605,0,0,0,0.234690248288502,0.837531287209079,0.714130922658041,1.36593553500459,0.630540576424764,0.8858587585951,0.159454768657487,0.655453258862952,1.20879487306127,0.867894351489069,0,0,0,0.551873492609465,0.321101179975584,0,0,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0,0,0,0,1.18586333383957,0,0.425820255624806,0,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0,0,0.582961673259701,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.404593039154462,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.578719832943424,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr19:40562058..40562081,- | |||
}} |
Latest revision as of 01:35, 4 August 2015
Short description: | p@chr19:40562058..40562081, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:40562058..40562081, - |
Coexpression cluster: | MCL_coexpression_mm9:338 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.88e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.41e-18 | 49 |
abdominal segment element | 1.41e-18 | 49 |
abdominal segment of trunk | 1.41e-18 | 49 |
abdomen | 1.41e-18 | 49 |
liver | 2.02e-18 | 22 |
epithelial sac | 2.02e-18 | 22 |
digestive gland | 2.02e-18 | 22 |
epithelium of foregut-midgut junction | 2.02e-18 | 22 |
anatomical boundary | 2.02e-18 | 22 |
hepatobiliary system | 2.02e-18 | 22 |
foregut-midgut junction | 2.02e-18 | 22 |
hepatic diverticulum | 2.02e-18 | 22 |
liver primordium | 2.02e-18 | 22 |
septum transversum | 2.02e-18 | 22 |
liver bud | 2.02e-18 | 22 |
digestive tract diverticulum | 1.70e-17 | 23 |
sac | 1.70e-17 | 23 |
trunk region element | 2.05e-16 | 79 |
exocrine gland | 7.18e-16 | 25 |
exocrine system | 7.18e-16 | 25 |
subdivision of trunk | 1.21e-15 | 66 |
mesenchyme | 1.43e-15 | 61 |
entire embryonic mesenchyme | 1.43e-15 | 61 |
trunk | 9.69e-14 | 90 |
epithelial tube | 9.67e-10 | 47 |
kidney | 2.33e-09 | 14 |
kidney mesenchyme | 2.33e-09 | 14 |
upper urinary tract | 2.33e-09 | 14 |
kidney rudiment | 2.33e-09 | 14 |
kidney field | 2.33e-09 | 14 |
urinary system structure | 6.35e-09 | 18 |
trunk mesenchyme | 7.45e-09 | 45 |
renal system | 2.21e-08 | 19 |
cavitated compound organ | 1.87e-07 | 21 |