FFCP PHASE1:Mm9::chr7:116314043..116314071,-: Difference between revisions
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{{FFCP|EntrezGene=109594|HGNC=|MCL_coexpression_id=224|UniProt=Q924W9,Q3UZX1|association_with_transcript=-221bp_to_ENSMUST00000036992,NM_057173,uc009jdk.1_5end|description=CAGE_peak_1_at_Lmo1_5end|id=chr7:116314043..116314071,-|ontology_enrichment_celltype=CL:0000117!2.91e-20!23;CL:0000337!2.91e-20!23;CL:0000540!8.16e-20!33;CL:0000047!8.16e-20!33;CL:0000031!8.16e-20!33;CL:0000404!8.16e-20!33;CL:0002319!1.03e-16!43;CL:0000221!5.39e-16!44;CL:0000133!5.39e-16!44;CL:0000393!1.17e-14!39;CL:0000211!1.17e-14!39;CL:0000055!2.39e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.13e-36,23;CL:0000337,2.13e-36,23;CL:0000540,3.80e-25,33;CL:0000047,3.80e-25,33;CL:0000031,3.80e-25,33;CL:0000404,3.80e-25,33;CL:0002319,1.00e-20,43;CL:0000393,3.95e-20,39;CL:0000211,3.95e-20,39;CL:0000221,4.48e-20,44;CL:0000133,4.48e-20,44;CL:0002609,9.18e-11,6;CL:0002321,8.06e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.76e-34!102;UBERON:0000924!2.76e-34!102;UBERON:0006601!2.76e-34!102;UBERON:0002346!2.21e-30!71;UBERON:0003075!2.21e-30!71;UBERON:0007284!2.21e-30!71;UBERON:0000073!3.50e-29!75;UBERON:0001016!3.50e-29!75;UBERON:0001017!4.85e-29!73;UBERON:0005743!4.85e-29!73;UBERON:0000033!5.69e-23!63;UBERON:0001049!2.28e-22!52;UBERON:0005068!2.28e-22!52;UBERON:0006241!2.28e-22!52;UBERON:0007135!2.28e-22!52;UBERON:0003056!1.36e-20!49;UBERON:0000955!2.52e-20!50;UBERON:0006238!2.52e-20!50;UBERON:0002616!4.14e-20!49;UBERON:0003080!1.50e-16!40;UBERON:0002780!7.83e-16!39;UBERON:0001890!7.83e-16!39;UBERON:0006240!7.83e-16!39;UBERON:0002020!1.01e-14!34;UBERON:0000153!1.02e-12!94;UBERON:0007811!6.50e-12!86;UBERON:0002791!5.57e-11!29;UBERON:0003528!5.57e-11!29;UBERON:0001893!5.57e-11!29;UBERON:0000956!4.78e-07!21;UBERON:0001869!4.78e-07!21;UBERON:0000203!4.78e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.86e-29,73;UBERON:0000073,4.23e-28,54;UBERON:0001016,5.88e-28,75;UBERON:0001049,3.96e-25,52;UBERON:0005068,3.96e-25,52;UBERON:0006241,3.96e-25,52;UBERON:0007135,3.96e-25,52;UBERON:0004121,4.45e-25,95;UBERON:0000924,4.45e-25,95;UBERON:0006601,4.45e-25,95;UBERON:0002346,2.88e-23,64;UBERON:0003075,2.88e-23,64;UBERON:0007284,2.88e-23,64;UBERON:0010371,7.62e-22,73;UBERON:0002020,1.40e-20,34;UBERON:0003080,1.98e-18,40;UBERON:0003056,3.49e-18,49;UBERON:0002616,5.57e-18,46;UBERON:0000955,1.95e-17,47;UBERON:0006238,1.95e-17,47;UBERON:0002780,2.78e-17,39;UBERON:0001890,2.78e-17,39;UBERON:0006240,2.78e-17,39;UBERON:0010314,2.52e-16,92;UBERON:0003528,3.53e-14,29;UBERON:0002791,3.53e-14,29;UBERON:0001893,3.53e-14,29;UBERON:0002240,1.15e-09,6;UBERON:0005174,1.15e-09,6;UBERON:0001137,1.15e-09,6;UBERON:0002420,2.07e-09,8;UBERON:0007245,2.07e-09,8;UBERON:0010009,2.07e-09,8;UBERON:0010011,2.07e-09,8;UBERON:0000454,2.07e-09,8;UBERON:0001948,7.11e-09,5;UBERON:0002315,7.11e-09,5;UBERON:0000956,2.74e-07,21;UBERON:0001869,2.74e-07,21;UBERON:0000203,2.74e-07,21;UBERON:0003076,2.86e-07,12;UBERON:0003057,2.86e-07,12|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,20.2316460859598,24.8625760257855,22.8179305262225,0,0,0,0,0,0,1.15265491596466,10.2652716185393,8.23536223823313,11.1472229516232,2.57085885963423,5.07997644188711,6.00204916153275,7.95517409451362,1.83843757322004,2.20231761998777,3.44755812830007,2.4577045320999,8.5726087024626,11.8019060247108,5.73004707612436,2.79182999001381,1.12552522006336,2.13917546887534,4.41942878210502,3.84403538157578,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,1.56136794089522,0.304465478312141,0.691846491768175,1.50722640552623,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,2.09706895166752,0,1.38219787324151,0.173824320192276,0.255715457330331,1.87009240103604,1.29793010454206,0.305518091550949,0,0,0.210441855886474,0.520481771850815,1.83921683546778,1.80062129805349,0.90422890701429,0.884474488967262,0.768682321709099,1.59292931751539,0.258703370739016,0,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,7.9236551532049,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.477937595905104,0.668396022247182,0,0.809621403349789,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.968786560175433,1.44751019827574,0.596861720015682,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0,0.51776031175182,0.830298780673413,0.798049746802062,1.02440163452481,0.486213434136588,0.838452650511929,0.551530525350042,1.33348036680969,0.824140228955577,1.28367683836726,1.26348605881899,1.52087579934144,0.188626341386076,0.842773567228942,0.704276676453562,0.918967503289812,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,1.1921809497366,0.145346416632329,0.658765662907314,0.592302255241736,0.182927972872773,1.05227884575137,0.814824683075171,2.24456908663095,0.593175090620871,0.394017929502254,1.22769312950907,0.77468420592983,0.578719832943424,2.24829520144151,1.63752125911786,1.71896843238639,0,0,0|short_description=p1@Lmo1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109594 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q924W9,uniprot:Q3UZX1 | |||
|association_with_transcript=-221bp_to_ENSMUST00000036992,NM_057173,uc009jdk.1_5end | |||
|cluster_id=chr7:116314043..116314071,- | |||
|description=CAGE_peak_1_at_Lmo1_5end | |||
|id=chr7:116314043..116314071,- | |||
|ontology_enrichment_celltype=CL:0000117!2.91e-20!23;CL:0000337!2.91e-20!23;CL:0000540!8.16e-20!33;CL:0000047!8.16e-20!33;CL:0000031!8.16e-20!33;CL:0000404!8.16e-20!33;CL:0002319!1.03e-16!43;CL:0000221!5.39e-16!44;CL:0000133!5.39e-16!44;CL:0000393!1.17e-14!39;CL:0000211!1.17e-14!39;CL:0000055!2.39e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.13e-36,23;CL:0000337,2.13e-36,23;CL:0000540,3.80e-25,33;CL:0000047,3.80e-25,33;CL:0000031,3.80e-25,33;CL:0000404,3.80e-25,33;CL:0002319,1.00e-20,43;CL:0000393,3.95e-20,39;CL:0000211,3.95e-20,39;CL:0000221,4.48e-20,44;CL:0000133,4.48e-20,44;CL:0002609,9.18e-11,6;CL:0002321,8.06e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.76e-34!102;UBERON:0000924!2.76e-34!102;UBERON:0006601!2.76e-34!102;UBERON:0002346!2.21e-30!71;UBERON:0003075!2.21e-30!71;UBERON:0007284!2.21e-30!71;UBERON:0000073!3.50e-29!75;UBERON:0001016!3.50e-29!75;UBERON:0001017!4.85e-29!73;UBERON:0005743!4.85e-29!73;UBERON:0000033!5.69e-23!63;UBERON:0001049!2.28e-22!52;UBERON:0005068!2.28e-22!52;UBERON:0006241!2.28e-22!52;UBERON:0007135!2.28e-22!52;UBERON:0003056!1.36e-20!49;UBERON:0000955!2.52e-20!50;UBERON:0006238!2.52e-20!50;UBERON:0002616!4.14e-20!49;UBERON:0003080!1.50e-16!40;UBERON:0002780!7.83e-16!39;UBERON:0001890!7.83e-16!39;UBERON:0006240!7.83e-16!39;UBERON:0002020!1.01e-14!34;UBERON:0000153!1.02e-12!94;UBERON:0007811!6.50e-12!86;UBERON:0002791!5.57e-11!29;UBERON:0003528!5.57e-11!29;UBERON:0001893!5.57e-11!29;UBERON:0000956!4.78e-07!21;UBERON:0001869!4.78e-07!21;UBERON:0000203!4.78e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.86e-29,73;UBERON:0000073,4.23e-28,54;UBERON:0001016,5.88e-28,75;UBERON:0001049,3.96e-25,52;UBERON:0005068,3.96e-25,52;UBERON:0006241,3.96e-25,52;UBERON:0007135,3.96e-25,52;UBERON:0004121,4.45e-25,95;UBERON:0000924,4.45e-25,95;UBERON:0006601,4.45e-25,95;UBERON:0002346,2.88e-23,64;UBERON:0003075,2.88e-23,64;UBERON:0007284,2.88e-23,64;UBERON:0010371,7.62e-22,73;UBERON:0002020,1.40e-20,34;UBERON:0003080,1.98e-18,40;UBERON:0003056,3.49e-18,49;UBERON:0002616,5.57e-18,46;UBERON:0000955,1.95e-17,47;UBERON:0006238,1.95e-17,47;UBERON:0002780,2.78e-17,39;UBERON:0001890,2.78e-17,39;UBERON:0006240,2.78e-17,39;UBERON:0010314,2.52e-16,92;UBERON:0003528,3.53e-14,29;UBERON:0002791,3.53e-14,29;UBERON:0001893,3.53e-14,29;UBERON:0002240,1.15e-09,6;UBERON:0005174,1.15e-09,6;UBERON:0001137,1.15e-09,6;UBERON:0002420,2.07e-09,8;UBERON:0007245,2.07e-09,8;UBERON:0010009,2.07e-09,8;UBERON:0010011,2.07e-09,8;UBERON:0000454,2.07e-09,8;UBERON:0001948,7.11e-09,5;UBERON:0002315,7.11e-09,5;UBERON:0000956,2.74e-07,21;UBERON:0001869,2.74e-07,21;UBERON:0000203,2.74e-07,21;UBERON:0003076,2.86e-07,12;UBERON:0003057,2.86e-07,12 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,20.2316460859598,24.8625760257855,22.8179305262225,0,0,0,0,0,0,1.15265491596466,10.2652716185393,8.23536223823313,11.1472229516232,2.57085885963423,5.07997644188711,6.00204916153275,7.95517409451362,1.83843757322004,2.20231761998777,3.44755812830007,2.4577045320999,8.5726087024626,11.8019060247108,5.73004707612436,2.79182999001381,1.12552522006336,2.13917546887534,4.41942878210502,3.84403538157578,2.79599168737951,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,1.56136794089522,0.304465478312141,0.691846491768175,1.50722640552623,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,1.25668024088073,0,0,0,0,2.09706895166752,0,1.38219787324151,0.173824320192276,0.255715457330331,1.87009240103604,1.29793010454206,0.305518091550949,0,0,0.210441855886474,0.520481771850815,1.83921683546778,1.80062129805349,0.90422890701429,0.884474488967262,0.768682321709099,1.59292931751539,0.258703370739016,0,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,7.9236551532049,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.477937595905104,0.668396022247182,0,0.809621403349789,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.968786560175433,1.44751019827574,0.596861720015682,0.164140899745061,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,1.37016503954128,0.755393897389701,1.35004500046361,0.45032120322422,0,0.51776031175182,0.830298780673413,0.798049746802062,1.02440163452481,0.486213434136588,0.838452650511929,0.551530525350042,1.33348036680969,0.824140228955577,1.28367683836726,1.26348605881899,1.52087579934144,0.188626341386076,0.842773567228942,0.704276676453562,0.918967503289812,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,1.1921809497366,0.145346416632329,0.658765662907314,0.592302255241736,0.182927972872773,1.05227884575137,0.814824683075171,2.24456908663095,0.593175090620871,0.394017929502254,1.22769312950907,0.77468420592983,0.578719832943424,2.24829520144151,1.63752125911786,1.71896843238639,0,0,0 | |||
|short_description=p1@Lmo1 | |||
}} |
Revision as of 00:35, 4 August 2015
Short description: | p1@Lmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -221bp_to_ENSMUST00000036992, NM_057173, uc009jdk.1_5end |
EntrezGene: | 109594 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.13e-36 | 23 |
neuroblast (sensu Vertebrata) | 2.13e-36 | 23 |
neuron | 3.80e-25 | 33 |
neuronal stem cell | 3.80e-25 | 33 |
neuroblast | 3.80e-25 | 33 |
electrically signaling cell | 3.80e-25 | 33 |
neural cell | 1.00e-20 | 43 |
electrically responsive cell | 3.95e-20 | 39 |
electrically active cell | 3.95e-20 | 39 |
ectodermal cell | 4.48e-20 | 44 |
neurectodermal cell | 4.48e-20 | 44 |
neuron of cerebral cortex | 9.18e-11 | 6 |
embryonic cell | 8.06e-10 | 70 |