Personal tools

FFCP PHASE1:Mm9::chr19:37858699..37858749,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1129
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr19:37858699..37858749,+
|description=CAGE_peak_at_chr19:37858699..37858749,+
|description=CAGE_peak_at_chr19:37858699..37858749,+
|id=chr19:37858699..37858749,+
|id=chr19:37858699..37858749,+
|ontology_enrichment_celltype=CL:0000988!5.97e-08!32;CL:0002032!5.97e-08!32;CL:0000037!5.97e-08!32;CL:0000566!5.97e-08!32;CL:0000837!5.97e-08!32;CL:0000063!2.46e-07!66;CL:0000838!8.67e-07!12;CL:0000791!8.82e-07!9;CL:0000789!8.82e-07!9;CL:0002420!8.82e-07!9;CL:0002419!8.82e-07!9;CL:0000790!8.82e-07!9
|ontology_enrichment_celltype=CL:0000988!5.97e-08!32;CL:0002032!5.97e-08!32;CL:0000037!5.97e-08!32;CL:0000566!5.97e-08!32;CL:0000837!5.97e-08!32;CL:0000063!2.46e-07!66;CL:0000838!8.67e-07!12;CL:0000791!8.82e-07!9;CL:0000789!8.82e-07!9;CL:0002420!8.82e-07!9;CL:0002419!8.82e-07!9;CL:0000790!8.82e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002031,8.96e-17,25;CL:0000084,3.50e-16,11;CL:0000827,3.50e-16,11;CL:0000791,9.31e-16,9;CL:0000789,9.31e-16,9;CL:0002420,9.31e-16,9;CL:0002419,9.31e-16,9;CL:0000790,9.31e-16,9;CL:0000738,1.85e-15,17;CL:0002087,1.85e-15,17;CL:0000838,1.05e-14,12;CL:0000219,1.74e-14,54;CL:0000988,2.81e-14,32;CL:0002032,2.81e-14,32;CL:0000037,2.81e-14,32;CL:0000837,2.81e-14,32;CL:0000893,4.94e-14,6;CL:0002489,4.94e-14,6;CL:0000898,4.94e-14,6;CL:0000809,4.94e-14,6;CL:0000810,4.94e-14,6;CL:0000895,4.94e-14,6;CL:0000808,4.94e-14,6;CL:0000894,4.94e-14,6;CL:0000806,4.94e-14,6;CL:0000807,4.94e-14,6;CL:0000805,4.94e-14,6;CL:0002425,4.94e-14,6;CL:0002436,4.94e-14,6;CL:0002427,4.94e-14,6;CL:0002428,4.94e-14,6;CL:0002429,4.94e-14,6;CL:0002433,4.94e-14,6;CL:0002431,4.94e-14,6;CL:0002432,4.94e-14,6;CL:0000624,7.27e-14,8;CL:0002320,1.07e-13,46;CL:0000134,1.07e-13,46;CL:0000542,1.88e-13,13;CL:0000051,1.88e-13,13;CL:0000215,4.27e-09,3;CL:0000349,6.52e-09,3;CL:0000351,6.52e-09,3;CL:0000068,2.38e-08,3;CL:0002202,2.38e-08,3;CL:0000069,2.38e-08,3;CL:0002632,2.38e-08,3;CL:0002368,2.38e-08,3;CL:0000307,2.38e-08,3;CL:0000377,2.38e-08,3;CL:0000034,9.60e-08,97;CL:0002076,3.72e-07,15;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-13,46;UBERON:0000358,6.52e-09,3;UBERON:0000307,6.52e-09,3;UBERON:0007010,6.52e-09,3;UBERON:0003126,2.38e-08,3;UBERON:0001005,2.38e-08,3;UBERON:0007196,2.38e-08,3;UBERON:0001558,2.38e-08,3;UBERON:0002193,1.84e-07,48;UBERON:0002405,1.84e-07,48;UBERON:0000072,2.27e-07,27
|phase1_expression=0.160148847104794,0.348975407639361,0,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0.903863264091034,1.267098499365,1.63845168425395,3.08192342805909,2.15384829287408,1.36960583944965,1.83582845079895,0,5.06188168474565,3.49780939064073,0.788655413395594,0.959801035240171,0,0,0,2.35079810225042,3.51983330145495,2.52350209173887,0,0,0,1.90023419456374,0,0.886922042621219,1.90509202037889,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.45839474333043,0,0,0,8.85996461998253,8.16172849153284,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,3.11743205523443,2.47337702157238,0.422530259330042,0,2.54805239706646,0,3.030874574157,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,0,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0,0,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,3.01582567878545,5.4390568381871,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.0974578807397524,0.0962118416403295,0.116876902181569,0,4.43971906748129,5.38283139656854,2.3503846290971,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,4.98374228796694,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421
|phase1_expression=0.160148847104794,0.348975407639361,0,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0.903863264091034,1.267098499365,1.63845168425395,3.08192342805909,2.15384829287408,1.36960583944965,1.83582845079895,0,5.06188168474565,3.49780939064073,0.788655413395594,0.959801035240171,0,0,0,2.35079810225042,3.51983330145495,2.52350209173887,0,0,0,1.90023419456374,0,0.886922042621219,1.90509202037889,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.45839474333043,0,0,0,8.85996461998253,8.16172849153284,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,3.11743205523443,2.47337702157238,0.422530259330042,0,2.54805239706646,0,3.030874574157,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,0,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0,0,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,3.01582567878545,5.4390568381871,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.0974578807397524,0.0962118416403295,0.116876902181569,0,4.43971906748129,5.38283139656854,2.3503846290971,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,4.98374228796694,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421
|short_description=p@chr19:37858699..37858749,+
|short_description=p@chr19:37858699..37858749,+
}}
}}

Latest revision as of 00:10, 4 August 2015

Short description:p@chr19:37858699..37858749, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr19:37858699..37858749, +
Coexpression cluster:MCL_coexpression_mm9:1129
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr19:37858699..37858749+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D98.86
Mouse Schwann, donor2.CNhs12573.11746-123F98.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell8.96e-1725
T cell3.50e-1611
pro-T cell3.50e-1611
mature alpha-beta T cell9.31e-169
alpha-beta T cell9.31e-169
immature T cell9.31e-169
mature T cell9.31e-169
immature alpha-beta T cell9.31e-169
leukocyte1.85e-1517
nongranular leukocyte1.85e-1517
lymphoid lineage restricted progenitor cell1.05e-1412
motile cell1.74e-1454
hematopoietic cell2.81e-1432
hematopoietic oligopotent progenitor cell2.81e-1432
hematopoietic stem cell2.81e-1432
hematopoietic multipotent progenitor cell2.81e-1432
thymocyte4.94e-146
double negative thymocyte4.94e-146
naive T cell4.94e-146
double-positive, alpha-beta thymocyte4.94e-146
CD4-positive, alpha-beta thymocyte4.94e-146
naive thymus-derived CD4-positive, alpha-beta T cell4.94e-146
DN4 thymocyte4.94e-146
DN1 thymic pro-T cell4.94e-146
DN2 thymocyte4.94e-146
DN3 thymocyte4.94e-146
immature single positive thymocyte4.94e-146
early T lineage precursor4.94e-146
mature CD4 single-positive thymocyte4.94e-146
resting double-positive thymocyte4.94e-146
double-positive blast4.94e-146
CD69-positive double-positive thymocyte4.94e-146
CD69-positive, CD4-positive single-positive thymocyte4.94e-146
CD4-positive, CD8-intermediate double-positive thymocyte4.94e-146
CD24-positive, CD4 single-positive thymocyte4.94e-146
CD4-positive, alpha-beta T cell7.27e-148
connective tissue cell1.07e-1346
mesenchymal cell1.07e-1346
lymphocyte1.88e-1313
common lymphoid progenitor1.88e-1313
barrier cell4.27e-093
extraembryonic cell6.52e-093
trophoblast cell6.52e-093
duct epithelial cell2.38e-083
epithelial cell of tracheobronchial tree2.38e-083
branched duct epithelial cell2.38e-083
epithelial cell of lower respiratory tract2.38e-083
respiratory epithelial cell2.38e-083
tracheal epithelial cell2.38e-083
tracheoblast2.38e-083
stem cell9.60e-0897
endo-epithelial cell3.72e-0715
insulating cell6.26e-072
myelin accumulating cell6.26e-072
Schwann cell6.26e-072
non-myelinating Schwann cell6.26e-072
myelinating Schwann cell;;Schwann cell6.26e-072
terminal Schwann cell6.26e-072
immature Schwann cell6.26e-072
Schwann cell precursor6.26e-072

Uber anatomy
Ontology termp-valuen
connective tissue1.07e-1346
blastocyst6.52e-093
blastula6.52e-093
cleaving embryo6.52e-093
trachea2.38e-083
respiratory airway2.38e-083
tracheobronchial tree2.38e-083
lower respiratory tract2.38e-083
hemolymphoid system1.84e-0748
immune system1.84e-0748
segment of respiratory tract2.27e-0727
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:37858699..37858749,%2B&oldid=3715963"