FFCP PHASE1:Mm9::chr5:140023924..140023936,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=173|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:140023924..140023936,+|id=chr5:140023924..140023936,+|ontology_enrichment_celltype=CL:0000117!2.73e-14!23;CL:0000337!2.73e-14!23;CL:0000540!9.76e-09!33;CL:0000047!9.76e-09!33;CL:0000031!9.76e-09!33;CL:0000404!9.76e-09!33;CL:0000393!8.22e-07!39;CL:0000211!8.22e-07!39|ontology_enrichment_celltype_v019_2=CL:0000120,5.56e-10,3;CL:0002613,1.40e-09,3;CL:0000117,3.44e-07,23;CL:0000337,3.44e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.72e-11!21;UBERON:0002113!5.12e-09!14;UBERON:0003918!5.12e-09!14;UBERON:0005095!5.12e-09!14;UBERON:0007687!5.12e-09!14;UBERON:0002420!1.22e-07!8;UBERON:0007245!1.22e-07!8;UBERON:0010009!1.22e-07!8;UBERON:0010011!1.22e-07!8;UBERON:0000454!1.22e-07!8;UBERON:0006554!1.23e-07!16;UBERON:0001008!4.52e-07!17;UBERON:0002950!8.53e-07!4;UBERON:0001891!8.53e-07!4;UBERON:0009616!8.53e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.60e-18,14;UBERON:0003918,7.60e-18,14;UBERON:0011143,7.60e-18,14;UBERON:0005095,7.60e-18,14;UBERON:0007687,7.60e-18,14;UBERON:0006554,7.91e-14,18;UBERON:0001008,4.36e-13,19;UBERON:0000489,8.17e-12,21;UBERON:0002037,1.67e-07,4;UBERON:0002680,1.67e-07,4;UBERON:0001895,1.67e-07,4;UBERON:0010092,1.67e-07,4;UBERON:0006215,1.67e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,1.10115880999389,0.383062014255563,0.307213066512487,1.05509030184155,0.914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,0.45839474333043,0,0.284743361598206,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46568271239006,3.19895835307241,2.25415471346161,6.31319116320474,3.68509725618489,3.99774173374816,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.399024873401031,0,0.486213434136588,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0,0,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr5:140023924..140023936,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:140023924..140023936,+ | |||
|description=CAGE_peak_at_chr5:140023924..140023936,+ | |||
|id=chr5:140023924..140023936,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.73e-14!23;CL:0000337!2.73e-14!23;CL:0000540!9.76e-09!33;CL:0000047!9.76e-09!33;CL:0000031!9.76e-09!33;CL:0000404!9.76e-09!33;CL:0000393!8.22e-07!39;CL:0000211!8.22e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,5.56e-10,3;CL:0002613,1.40e-09,3;CL:0000117,3.44e-07,23;CL:0000337,3.44e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.72e-11!21;UBERON:0002113!5.12e-09!14;UBERON:0003918!5.12e-09!14;UBERON:0005095!5.12e-09!14;UBERON:0007687!5.12e-09!14;UBERON:0002420!1.22e-07!8;UBERON:0007245!1.22e-07!8;UBERON:0010009!1.22e-07!8;UBERON:0010011!1.22e-07!8;UBERON:0000454!1.22e-07!8;UBERON:0006554!1.23e-07!16;UBERON:0001008!4.52e-07!17;UBERON:0002950!8.53e-07!4;UBERON:0001891!8.53e-07!4;UBERON:0009616!8.53e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.60e-18,14;UBERON:0003918,7.60e-18,14;UBERON:0011143,7.60e-18,14;UBERON:0005095,7.60e-18,14;UBERON:0007687,7.60e-18,14;UBERON:0006554,7.91e-14,18;UBERON:0001008,4.36e-13,19;UBERON:0000489,8.17e-12,21;UBERON:0002037,1.67e-07,4;UBERON:0002680,1.67e-07,4;UBERON:0001895,1.67e-07,4;UBERON:0010092,1.67e-07,4;UBERON:0006215,1.67e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,1.10115880999389,0.383062014255563,0.307213066512487,1.05509030184155,0.914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,0.45839474333043,0,0.284743361598206,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46568271239006,3.19895835307241,2.25415471346161,6.31319116320474,3.68509725618489,3.99774173374816,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0.399024873401031,0,0.486213434136588,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0,0,0.115884325944855,0.38581844092741,0,0,0,0.354951612318675,0.476872379894642,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:140023924..140023936,+ | |||
}} |
Latest revision as of 23:09, 3 August 2015
Short description: | p@chr5:140023924..140023936, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:140023924..140023936, + |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 5.56e-10 | 3 |
striatum neuron | 1.40e-09 | 3 |
CNS neuron (sensu Vertebrata) | 3.44e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.44e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.60e-18 | 14 |
kidney mesenchyme | 7.60e-18 | 14 |
upper urinary tract | 7.60e-18 | 14 |
kidney rudiment | 7.60e-18 | 14 |
kidney field | 7.60e-18 | 14 |
urinary system structure | 7.91e-14 | 18 |
renal system | 4.36e-13 | 19 |
cavitated compound organ | 8.17e-12 | 21 |
cerebellum | 1.67e-07 | 4 |
regional part of metencephalon | 1.67e-07 | 4 |
metencephalon | 1.67e-07 | 4 |
future metencephalon | 1.67e-07 | 4 |
rhombic lip | 1.67e-07 | 4 |