FFCP PHASE1:Mm9::chr11:73093259..73093293,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:73093259..73093293,+ | |||
|description=CAGE_peak_at_chr11:73093259..73093293,+ | |description=CAGE_peak_at_chr11:73093259..73093293,+ | ||
|id=chr11:73093259..73093293,+ | |id=chr11:73093259..73093293,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.61e-11,3;CL:0000351,4.61e-11,3;CL:0000213,4.39e-09,1;CL:0002078,4.39e-09,1;CL:0000115,4.39e-09,1;CL:0002262,4.39e-09,1;CL:1000398,4.39e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!6.61e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.80e-11,6;UBERON:0004457,2.80e-11,6;UBERON:0000042,2.80e-11,6;UBERON:0004854,2.80e-11,6;UBERON:0009034,2.80e-11,6;UBERON:0002095,2.80e-11,6;UBERON:0004782,2.80e-11,6;UBERON:0003281,2.80e-11,6;UBERON:0009664,2.80e-11,6;UBERON:0002296,2.80e-11,6;UBERON:0005602,2.80e-11,6;UBERON:0001179,2.80e-11,6;UBERON:0006293,2.80e-11,6;UBERON:0000358,4.61e-11,3;UBERON:0000307,4.61e-11,3;UBERON:0007010,4.61e-11,3;UBERON:0002394,4.39e-09,1;UBERON:0001281,4.39e-09,1;UBERON:0000353,4.39e-09,1;UBERON:0003497,4.39e-09,1;UBERON:0003909,4.39e-09,1;UBERON:0003928,4.39e-09,1;UBERON:0003835,4.39e-09,1;UBERON:0003513,4.39e-09,1;UBERON:0001280,4.39e-09,1;UBERON:0004647,4.39e-09,1;UBERON:0002294,4.39e-09,1;UBERON:0001173,4.39e-09,1;UBERON:0004912,4.39e-09,1;UBERON:0005171,4.39e-09,1;UBERON:0003887,5.44e-07,10;UBERON:0002323,8.55e-07,37;UBERON:0004458,8.55e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66688324013859,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.60289056221049,0.117588707135705,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,1.16266972375204,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0.994782360205754,0.779856348476481,1.79763881730844,0.216138049874694,0,0,0.456994050438915,0,0.407302655690628,0.193952487167626,0.49095073923223,1.45444035385792,0.885660887877613,0.784993639206874,0.987177311374404,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0,1.02522528478712,0,0.740778109478847,1.13021074202815,0.956859594047176,1.37266903923914,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0.66183396182839,0.777804753376191,1.16243841129958,1.35164900392623,1.87771581833206,0.13020438484395,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,1.77588762699252,2.33256027184637,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.883193520806384,0,0.177475806159338,0,0,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66688324013859,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.60289056221049,0.117588707135705,0,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,1.16266972375204,0.268273401399619,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0.994782360205754,0.779856348476481,1.79763881730844,0.216138049874694,0,0,0.456994050438915,0,0.407302655690628,0.193952487167626,0.49095073923223,1.45444035385792,0.885660887877613,0.784993639206874,0.987177311374404,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0,1.02522528478712,0,0.740778109478847,1.13021074202815,0.956859594047176,1.37266903923914,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0.66183396182839,0.777804753376191,1.16243841129958,1.35164900392623,1.87771581833206,0.13020438484395,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,1.77588762699252,2.33256027184637,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.883193520806384,0,0.177475806159338,0,0,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0 | ||
|short_description=p@chr11:73093259..73093293,+ | |short_description=p@chr11:73093259..73093293,+ | ||
}} | }} |
Latest revision as of 22:43, 3 August 2015
Short description: | p@chr11:73093259..73093293, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:73093259..73093293, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.61e-11 | 3 |
trophoblast cell | 4.61e-11 | 3 |
lining cell | 4.39e-09 | 1 |
meso-epithelial cell | 4.39e-09 | 1 |
endothelial cell | 4.39e-09 | 1 |
endothelial cell of sinusoid | 4.39e-09 | 1 |
endothelial cell of hepatic sinusoid | 4.39e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.80e-11 | 6 |
cavity lining | 2.80e-11 | 6 |
serous membrane | 2.80e-11 | 6 |
gastrointestinal system mesentery | 2.80e-11 | 6 |
stomach region | 2.80e-11 | 6 |
mesentery | 2.80e-11 | 6 |
gastrointestinal system serosa | 2.80e-11 | 6 |
mesentery of stomach | 2.80e-11 | 6 |
gut mesentery | 2.80e-11 | 6 |
dorsal mesentery | 2.80e-11 | 6 |
dorsal mesogastrium | 2.80e-11 | 6 |
peritoneal cavity | 2.80e-11 | 6 |
spleen primordium | 2.80e-11 | 6 |
blastocyst | 4.61e-11 | 3 |
blastula | 4.61e-11 | 3 |
cleaving embryo | 4.61e-11 | 3 |
bile duct | 4.39e-09 | 1 |
hepatic sinusoid | 4.39e-09 | 1 |
parenchyma | 4.39e-09 | 1 |
abdomen blood vessel | 4.39e-09 | 1 |
sinusoid | 4.39e-09 | 1 |
digestive system duct | 4.39e-09 | 1 |
abdominal segment blood vessel | 4.39e-09 | 1 |
trunk blood vessel | 4.39e-09 | 1 |
liver parenchyma | 4.39e-09 | 1 |
liver lobule | 4.39e-09 | 1 |
biliary system | 4.39e-09 | 1 |
biliary tree | 4.39e-09 | 1 |
biliary bud | 4.39e-09 | 1 |
hepatic duct | 4.39e-09 | 1 |
intraembryonic coelom | 5.44e-07 | 10 |
body cavity | 8.55e-07 | 37 |
body cavity or lining | 8.55e-07 | 37 |