FFCP PHASE1:Mm9::chr10:115726435..115726454,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=264 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115726435..115726454,+ | |||
|description=CAGE_peak_at_chr10:115726435..115726454,+ | |description=CAGE_peak_at_chr10:115726435..115726454,+ | ||
|id=chr10:115726435..115726454,+ | |id=chr10:115726435..115726454,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.33e-13!66;UBERON:0005177!9.60e-10!85;UBERON:0002048!7.56e-09!14;UBERON:0000117!7.56e-09!14;UBERON:0000171!7.56e-09!14;UBERON:0000170!7.56e-09!14;UBERON:0005597!7.56e-09!14;UBERON:0000118!7.56e-09!14;UBERON:0005172!2.22e-08!49;UBERON:0005173!2.22e-08!49;UBERON:0002417!2.22e-08!49;UBERON:0000916!2.22e-08!49;UBERON:0000926!6.88e-08!193;UBERON:0004120!6.88e-08!193;UBERON:0006603!6.88e-08!193;UBERON:0004872!8.75e-08!33;UBERON:0005153!2.33e-07!17;UBERON:0001048!7.44e-07!147;UBERON:0003914!7.60e-07!47;UBERON:0005157!9.22e-07!27 | |ontology_enrichment_uberon=UBERON:0009569!1.33e-13!66;UBERON:0005177!9.60e-10!85;UBERON:0002048!7.56e-09!14;UBERON:0000117!7.56e-09!14;UBERON:0000171!7.56e-09!14;UBERON:0000170!7.56e-09!14;UBERON:0005597!7.56e-09!14;UBERON:0000118!7.56e-09!14;UBERON:0005172!2.22e-08!49;UBERON:0005173!2.22e-08!49;UBERON:0002417!2.22e-08!49;UBERON:0000916!2.22e-08!49;UBERON:0000926!6.88e-08!193;UBERON:0004120!6.88e-08!193;UBERON:0006603!6.88e-08!193;UBERON:0004872!8.75e-08!33;UBERON:0005153!2.33e-07!17;UBERON:0001048!7.44e-07!147;UBERON:0003914!7.60e-07!47;UBERON:0005157!9.22e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.13e-17,14;UBERON:0000117,1.13e-17,14;UBERON:0000171,1.13e-17,14;UBERON:0000170,1.13e-17,14;UBERON:0005597,1.13e-17,14;UBERON:0000118,1.13e-17,14;UBERON:0009569,9.69e-15,66;UBERON:0005153,3.38e-14,17;UBERON:0005178,3.38e-14,17;UBERON:0005181,3.38e-14,17;UBERON:0002224,3.38e-14,17;UBERON:0000915,3.38e-14,17;UBERON:0008947,3.38e-14,17;UBERON:0003258,3.38e-14,17;UBERON:0005157,9.10e-12,20;UBERON:0005177,1.70e-11,79;UBERON:0002100,1.73e-09,90;UBERON:0003914,2.16e-09,47;UBERON:0000025,2.87e-09,114;UBERON:0004111,2.67e-08,122;UBERON:0007100,3.04e-08,18;UBERON:0000948,3.04e-08,18;UBERON:0005498,3.04e-08,18;UBERON:0004140,3.04e-08,18;UBERON:0009881,3.04e-08,18;UBERON:0004141,3.04e-08,18;UBERON:0003084,3.04e-08,18;UBERON:0007005,3.04e-08,18;UBERON:0004139,3.04e-08,18;UBERON:0004291,3.04e-08,18;UBERON:0004535,6.50e-08,23;UBERON:0001009,6.50e-08,23;UBERON:0001048,7.26e-08,134;UBERON:0004872,1.58e-07,33;UBERON:0005911,1.85e-07,69;UBERON:0001041,8.68e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.904335843315735,0.823120949949934,0.502666365318702,0.494389935468748,0.433798070759735,0,0.970601099684455,0.662524555381181,0.969750506270444,0,0.292780797011547,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,1.57411385397923,1.07986979021165,2.55787339225449,1.87791380979733,0.934122738937356,1.15191894939436,5.08919138645195,0.891756905004413,2.04679982395465,1.97595103761946,0.805238512562231,0,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0.571242563048644,0,1.83286195060783,0.581857461502877,0.911765658574141,1.7706230394792,1.77132177575523,2.35498091762062,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,1.09824565275233,10.0637744569148,1.86070473834252,0.936113019343682,1.76805214562978,0.538192240565737,1.4473305640901,1.47802552133284,0,0.325929952884052,0.678980343100753,1.64283173801951,1.00503754465089,0.952174563544055,1.75620283072019,1.89162172927429,1.99318220683897,3.34855014180723,5.40748938561935,3.28101465545202,3.47157740595628,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,1.64270195644597,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.492422699235184,0,0,0.683483523191411,0,0.925972636848558,0.565105371014073,0.410082683163076,1.14389086603261,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,1.21553358534147,0,0,0.44449345560323,1.03017528619447,0,0,0,0,0.187283014939765,0.128050304809739,0.287177344778066,1.42888107384922,0.579421629724277,0,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,0.788035859004508,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.904335843315735,0.823120949949934,0.502666365318702,0.494389935468748,0.433798070759735,0,0.970601099684455,0.662524555381181,0.969750506270444,0,0.292780797011547,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0.469052119962192,0.540186184383045,0.473489471170421,1.57411385397923,1.07986979021165,2.55787339225449,1.87791380979733,0.934122738937356,1.15191894939436,5.08919138645195,0.891756905004413,2.04679982395465,1.97595103761946,0.805238512562231,0,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0.571242563048644,0,1.83286195060783,0.581857461502877,0.911765658574141,1.7706230394792,1.77132177575523,2.35498091762062,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,1.09824565275233,10.0637744569148,1.86070473834252,0.936113019343682,1.76805214562978,0.538192240565737,1.4473305640901,1.47802552133284,0,0.325929952884052,0.678980343100753,1.64283173801951,1.00503754465089,0.952174563544055,1.75620283072019,1.89162172927429,1.99318220683897,3.34855014180723,5.40748938561935,3.28101465545202,3.47157740595628,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,1.64270195644597,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.492422699235184,0,0,0.683483523191411,0,0.925972636848558,0.565105371014073,0.410082683163076,1.14389086603261,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,1.21553358534147,0,0,0.44449345560323,1.03017528619447,0,0,0,0,0.187283014939765,0.128050304809739,0.287177344778066,1.42888107384922,0.579421629724277,0,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,0.788035859004508,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr10:115726435..115726454,+ | |short_description=p@chr10:115726435..115726454,+ | ||
}} | }} |
Latest revision as of 21:50, 3 August 2015
Short description: | p@chr10:115726435..115726454, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115726435..115726454, + |
Coexpression cluster: | MCL_coexpression_mm9:264 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.13e-17 | 14 |
respiratory tube | 1.13e-17 | 14 |
respiration organ | 1.13e-17 | 14 |
pair of lungs | 1.13e-17 | 14 |
lung primordium | 1.13e-17 | 14 |
lung bud | 1.13e-17 | 14 |
subdivision of trunk | 9.69e-15 | 66 |
epithelial bud | 3.38e-14 | 17 |
thoracic cavity element | 3.38e-14 | 17 |
thoracic segment organ | 3.38e-14 | 17 |
thoracic cavity | 3.38e-14 | 17 |
thoracic segment of trunk | 3.38e-14 | 17 |
respiratory primordium | 3.38e-14 | 17 |
endoderm of foregut | 3.38e-14 | 17 |
epithelial fold | 9.10e-12 | 20 |
trunk region element | 1.70e-11 | 79 |
trunk | 1.73e-09 | 90 |
epithelial tube | 2.16e-09 | 47 |
tube | 2.87e-09 | 114 |
anatomical conduit | 2.67e-08 | 122 |
primary circulatory organ | 3.04e-08 | 18 |
heart | 3.04e-08 | 18 |
primitive heart tube | 3.04e-08 | 18 |
primary heart field | 3.04e-08 | 18 |
anterior lateral plate mesoderm | 3.04e-08 | 18 |
heart tube | 3.04e-08 | 18 |
heart primordium | 3.04e-08 | 18 |
cardiac mesoderm | 3.04e-08 | 18 |
cardiogenic plate | 3.04e-08 | 18 |
heart rudiment | 3.04e-08 | 18 |
cardiovascular system | 6.50e-08 | 23 |
circulatory system | 6.50e-08 | 23 |
primordium | 7.26e-08 | 134 |
splanchnic layer of lateral plate mesoderm | 1.58e-07 | 33 |
endo-epithelium | 1.85e-07 | 69 |
foregut | 8.68e-07 | 80 |