FFCP PHASE1:Mm9::chr10:114942702..114942717,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:114942702..114942717,-
|short_description=p@chr10:114942702..114942717,-
|description=CAGE_peak_at_chr10:114942702..114942717,-
|association_with_transcri...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:114942702..114942717,- | |||
|description=CAGE_peak_at_chr10:114942702..114942717,- | |||
|id=chr10:114942702..114942717,- | |||
|ontology_enrichment_celltype=CL:0002250!3.40e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.67e-34,3;CL:0002563,6.65e-12,9;CL:0002251,6.65e-12,9;CL:0002076,2.17e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.39e-20!43;UBERON:0005409!2.94e-17!59;UBERON:0000344!1.77e-08!15;UBERON:0001242!1.49e-07!13;UBERON:0000060!1.49e-07!13;UBERON:0001262!1.49e-07!13;UBERON:0004786!1.49e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-22,31;UBERON:0005409,7.01e-15,47;UBERON:0003350,6.65e-12,9;UBERON:0004808,6.65e-12,9;UBERON:0001277,6.65e-12,9;UBERON:0000485,7.37e-10,11;UBERON:0001242,1.95e-08,13;UBERON:0001262,1.95e-08,13;UBERON:0004786,1.95e-08,13;UBERON:0000344,2.17e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,14.4425809875637,10.472782657585,15.7210404322024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15980715189884,0.80673409849337,1.11189021922435,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,1.39269530428806,1.16978452271472,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,14.4425809875637,10.472782657585,15.7210404322024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15980715189884,0.80673409849337,1.11189021922435,0.570676878337677,0.949058123089023,0.658795818896044,0.754005626400808,1.39269530428806,1.16978452271472,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:114942702..114942717,- | |||
}} | }} |
Latest revision as of 21:39, 3 August 2015
Short description: | p@chr10:114942702..114942717, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114942702..114942717, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.67e-34 | 3 |
intestinal epithelial cell | 6.65e-12 | 9 |
epithelial cell of alimentary canal | 6.65e-12 | 9 |
endo-epithelial cell | 2.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.57e-22 | 31 |
gastrointestinal system | 7.01e-15 | 47 |
epithelium of mucosa | 6.65e-12 | 9 |
gastrointestinal system epithelium | 6.65e-12 | 9 |
intestinal epithelium | 6.65e-12 | 9 |
simple columnar epithelium | 7.37e-10 | 11 |
intestinal mucosa | 1.95e-08 | 13 |
wall of intestine | 1.95e-08 | 13 |
gastrointestinal system mucosa | 1.95e-08 | 13 |
mucosa | 2.17e-07 | 15 |