FFCP PHASE1:Mm9::chr5:137547102..137547119,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=214|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:137547102..137547119,-|id=chr5:137547102..137547119,-|ontology_enrichment_celltype=CL:0000680!4.15e-12!6;CL:0000183!4.15e-12!6;CL:0000187!4.15e-12!6;CL:0000056!4.15e-12!6;CL:0000222!3.00e-10!7;CL:0000333!1.31e-08!10;CL:0000095!1.31e-08!10;CL:0000243!1.31e-08!10;CL:0000123!1.31e-08!10;CL:0000125!1.31e-08!10;CL:0000030!1.31e-08!10;CL:0000339!1.31e-08!10;CL:0000548!2.04e-08!115;CL:0000004!2.04e-08!115;CL:0000255!2.04e-08!115;CL:0002371!5.13e-08!118;CL:0000355!8.99e-08!9;CL:0002494!1.21e-07!3;CL:0000737!1.21e-07!3;CL:0000746!1.21e-07!3;CL:0000513!1.21e-07!3;CL:0000144!1.23e-07!121;CL:0000012!1.23e-07!121;CL:0002092!2.57e-07!3;CL:0002540!2.57e-07!3;CL:0000349!6.14e-07!3;CL:0000351!6.14e-07!3|ontology_enrichment_celltype_v019_2=CL:0002494,5.84e-22,3;CL:0000737,5.84e-22,3;CL:0000746,5.84e-22,3;CL:0000513,5.84e-22,3;CL:0002092,7.30e-21,3;CL:0002540,7.30e-21,3;CL:0000680,2.73e-11,6;CL:0000187,2.73e-11,6;CL:0000056,2.73e-11,6;CL:0000222,9.37e-10,7;CL:0000068,1.14e-09,3;CL:0002202,1.14e-09,3;CL:0000069,1.14e-09,3;CL:0002632,1.14e-09,3;CL:0002368,1.14e-09,3;CL:0000307,1.14e-09,3;CL:0000377,1.14e-09,3;CL:0000355,1.06e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!8.99e-08!9;UBERON:0002036!8.99e-08!9;UBERON:0002385!8.99e-08!9;UBERON:0000486!8.99e-08!9;UBERON:0001015!8.99e-08!9;UBERON:0004290!8.99e-08!9;UBERON:0003082!8.99e-08!9;UBERON:0000947!2.19e-07!4;UBERON:0001637!2.19e-07!4;UBERON:0003509!2.19e-07!4;UBERON:0004573!2.19e-07!4;UBERON:0004571!2.19e-07!4;UBERON:0010191!2.19e-07!4;UBERON:0004572!2.19e-07!4;UBERON:0005631!5.36e-07!3;UBERON:0000478!5.36e-07!3;UBERON:0000158!5.36e-07!3;UBERON:0000358!6.14e-07!3;UBERON:0000307!6.14e-07!3;UBERON:0000383!6.60e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.65e-14,2;UBERON:0003124,3.65e-14,2;UBERON:0004340,3.65e-14,2;UBERON:0005631,9.30e-10,3;UBERON:0000478,9.30e-10,3;UBERON:0000158,9.30e-10,3;UBERON:0003126,1.14e-09,3;UBERON:0001005,1.14e-09,3;UBERON:0007196,1.14e-09,3;UBERON:0001558,1.14e-09,3;UBERON:0001134,1.06e-07,9;UBERON:0002036,1.06e-07,9;UBERON:0002385,1.06e-07,9;UBERON:0000486,1.06e-07,9;UBERON:0007503,1.06e-07,9;UBERON:0001015,1.06e-07,9;UBERON:0002329,1.06e-07,9;UBERON:0003082,1.06e-07,9;UBERON:0003059,1.06e-07,9;UBERON:0007282,1.06e-07,9;UBERON:0004290,1.06e-07,9;UBERON:0009618,1.06e-07,9;UBERON:0005795,1.54e-07,4;UBERON:0000995,1.54e-07,4;UBERON:0002204,1.56e-07,32;UBERON:0000383,5.62e-07,10|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0.878744730937887,4.86074747685709,0.139986421625363,0,0,0,0,23.4106086792712,4.58453503902011,9.28209766099396,0,0,0,0,0,1.3498495759221,2.96659908770092,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.151143120213571,0,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,1.01343946190039,1.51657333504435,0,0,0,0,0,0,0,0,0,0.741584903203122,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.0591603543191,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.897138566094757,2.68615386182526,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr5:137547102..137547119,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:137547102..137547119,- | |||
|description=CAGE_peak_at_chr5:137547102..137547119,- | |||
|id=chr5:137547102..137547119,- | |||
|ontology_enrichment_celltype=CL:0000680!4.15e-12!6;CL:0000183!4.15e-12!6;CL:0000187!4.15e-12!6;CL:0000056!4.15e-12!6;CL:0000222!3.00e-10!7;CL:0000333!1.31e-08!10;CL:0000095!1.31e-08!10;CL:0000243!1.31e-08!10;CL:0000123!1.31e-08!10;CL:0000125!1.31e-08!10;CL:0000030!1.31e-08!10;CL:0000339!1.31e-08!10;CL:0000548!2.04e-08!115;CL:0000004!2.04e-08!115;CL:0000255!2.04e-08!115;CL:0002371!5.13e-08!118;CL:0000355!8.99e-08!9;CL:0002494!1.21e-07!3;CL:0000737!1.21e-07!3;CL:0000746!1.21e-07!3;CL:0000513!1.21e-07!3;CL:0000144!1.23e-07!121;CL:0000012!1.23e-07!121;CL:0002092!2.57e-07!3;CL:0002540!2.57e-07!3;CL:0000349!6.14e-07!3;CL:0000351!6.14e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,5.84e-22,3;CL:0000737,5.84e-22,3;CL:0000746,5.84e-22,3;CL:0000513,5.84e-22,3;CL:0002092,7.30e-21,3;CL:0002540,7.30e-21,3;CL:0000680,2.73e-11,6;CL:0000187,2.73e-11,6;CL:0000056,2.73e-11,6;CL:0000222,9.37e-10,7;CL:0000068,1.14e-09,3;CL:0002202,1.14e-09,3;CL:0000069,1.14e-09,3;CL:0002632,1.14e-09,3;CL:0002368,1.14e-09,3;CL:0000307,1.14e-09,3;CL:0000377,1.14e-09,3;CL:0000355,1.06e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!8.99e-08!9;UBERON:0002036!8.99e-08!9;UBERON:0002385!8.99e-08!9;UBERON:0000486!8.99e-08!9;UBERON:0001015!8.99e-08!9;UBERON:0004290!8.99e-08!9;UBERON:0003082!8.99e-08!9;UBERON:0000947!2.19e-07!4;UBERON:0001637!2.19e-07!4;UBERON:0003509!2.19e-07!4;UBERON:0004573!2.19e-07!4;UBERON:0004571!2.19e-07!4;UBERON:0010191!2.19e-07!4;UBERON:0004572!2.19e-07!4;UBERON:0005631!5.36e-07!3;UBERON:0000478!5.36e-07!3;UBERON:0000158!5.36e-07!3;UBERON:0000358!6.14e-07!3;UBERON:0000307!6.14e-07!3;UBERON:0000383!6.60e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.65e-14,2;UBERON:0003124,3.65e-14,2;UBERON:0004340,3.65e-14,2;UBERON:0005631,9.30e-10,3;UBERON:0000478,9.30e-10,3;UBERON:0000158,9.30e-10,3;UBERON:0003126,1.14e-09,3;UBERON:0001005,1.14e-09,3;UBERON:0007196,1.14e-09,3;UBERON:0001558,1.14e-09,3;UBERON:0001134,1.06e-07,9;UBERON:0002036,1.06e-07,9;UBERON:0002385,1.06e-07,9;UBERON:0000486,1.06e-07,9;UBERON:0007503,1.06e-07,9;UBERON:0001015,1.06e-07,9;UBERON:0002329,1.06e-07,9;UBERON:0003082,1.06e-07,9;UBERON:0003059,1.06e-07,9;UBERON:0007282,1.06e-07,9;UBERON:0004290,1.06e-07,9;UBERON:0009618,1.06e-07,9;UBERON:0005795,1.54e-07,4;UBERON:0000995,1.54e-07,4;UBERON:0002204,1.56e-07,32;UBERON:0000383,5.62e-07,10 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0.878744730937887,4.86074747685709,0.139986421625363,0,0,0,0,23.4106086792712,4.58453503902011,9.28209766099396,0,0,0,0,0,1.3498495759221,2.96659908770092,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.151143120213571,0,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,1.01343946190039,1.51657333504435,0,0,0,0,0,0,0,0,0,0.741584903203122,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.0591603543191,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.897138566094757,2.68615386182526,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr5:137547102..137547119,- | |||
}} |
Latest revision as of 20:57, 3 August 2015
Short description: | p@chr5:137547102..137547119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137547102..137547119, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 5.84e-22 | 3 |
striated muscle cell | 5.84e-22 | 3 |
cardiac muscle cell | 5.84e-22 | 3 |
cardiac muscle myoblast | 5.84e-22 | 3 |
bone marrow cell | 7.30e-21 | 3 |
mesenchymal stem cell of the bone marrow | 7.30e-21 | 3 |
muscle precursor cell | 2.73e-11 | 6 |
muscle cell | 2.73e-11 | 6 |
myoblast | 2.73e-11 | 6 |
mesodermal cell | 9.37e-10 | 7 |
duct epithelial cell | 1.14e-09 | 3 |
epithelial cell of tracheobronchial tree | 1.14e-09 | 3 |
branched duct epithelial cell | 1.14e-09 | 3 |
epithelial cell of lower respiratory tract | 1.14e-09 | 3 |
respiratory epithelial cell | 1.14e-09 | 3 |
tracheal epithelial cell | 1.14e-09 | 3 |
tracheoblast | 1.14e-09 | 3 |
multi-potent skeletal muscle stem cell | 1.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.65e-14 | 2 |
chorion | 3.65e-14 | 2 |
allantois | 3.65e-14 | 2 |
extraembryonic membrane | 9.30e-10 | 3 |
extraembryonic structure | 9.30e-10 | 3 |
membranous layer | 9.30e-10 | 3 |
trachea | 1.14e-09 | 3 |
respiratory airway | 1.14e-09 | 3 |
tracheobronchial tree | 1.14e-09 | 3 |
lower respiratory tract | 1.14e-09 | 3 |
skeletal muscle tissue | 1.06e-07 | 9 |
striated muscle tissue | 1.06e-07 | 9 |
muscle tissue | 1.06e-07 | 9 |
multilaminar epithelium | 1.06e-07 | 9 |
epithelial vesicle | 1.06e-07 | 9 |
musculature | 1.06e-07 | 9 |
somite | 1.06e-07 | 9 |
myotome | 1.06e-07 | 9 |
presomitic mesoderm | 1.06e-07 | 9 |
presumptive segmental plate | 1.06e-07 | 9 |
dermomyotome | 1.06e-07 | 9 |
trunk paraxial mesoderm | 1.06e-07 | 9 |
embryonic uterus | 1.54e-07 | 4 |
uterus | 1.54e-07 | 4 |
musculoskeletal system | 1.56e-07 | 32 |
musculature of body | 5.62e-07 | 10 |