FFCP PHASE1:Mm9::chr5:137542838..137542864,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137542838..137542864,+ | |||
|description=CAGE_peak_at_chr5:137542838..137542864,+ | |description=CAGE_peak_at_chr5:137542838..137542864,+ | ||
|id=chr5:137542838..137542864,+ | |id=chr5:137542838..137542864,+ | ||
|ontology_enrichment_celltype=CL:0000680!3.79e-10!6;CL:0000183!3.79e-10!6;CL:0000187!3.79e-10!6;CL:0000056!3.79e-10!6;CL:0000222!1.48e-08!7;CL:0000333!1.54e-07!10;CL:0000095!1.54e-07!10;CL:0000243!1.54e-07!10;CL:0000123!1.54e-07!10;CL:0000125!1.54e-07!10;CL:0000030!1.54e-07!10;CL:0000339!1.54e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.11e-19,3;CL:0000737,1.11e-19,3;CL:0000746,1.11e-19,3;CL:0000513,1.11e-19,3;CL:0002605,1.69e-13,2;CL:0002604,1.69e-13,2;CL:0000680,3.83e-10,6;CL:0000187,3.83e-10,6;CL:0000056,3.83e-10,6;CL:0002092,2.90e-09,3;CL:0002540,2.90e-09,3;CL:0000222,9.05e-09,7;CL:0000355,6.25e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!1.36e-08!5;UBERON:0005795!1.74e-07!4;UBERON:0000995!1.74e-07!4;UBERON:0003134!6.36e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.90e-14,2;UBERON:0003124,2.90e-14,2;UBERON:0004340,2.90e-14,2;UBERON:0005631,8.19e-10,3;UBERON:0000478,8.19e-10,3;UBERON:0000158,8.19e-10,3;UBERON:0005795,1.43e-07,4;UBERON:0000995,1.43e-07,4;UBERON:0001134,6.25e-07,9;UBERON:0002036,6.25e-07,9;UBERON:0002385,6.25e-07,9;UBERON:0000486,6.25e-07,9;UBERON:0007503,6.25e-07,9;UBERON:0001015,6.25e-07,9;UBERON:0002329,6.25e-07,9;UBERON:0003082,6.25e-07,9;UBERON:0003059,6.25e-07,9;UBERON:0007282,6.25e-07,9;UBERON:0004290,6.25e-07,9;UBERON:0009618,6.25e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0,1.5378032791413,1.94429899074283,0,0,0,0,0,16.2073444702647,2.0057340795713,1.03134418455488,0,0,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,0,0,4.75979933595425,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,9.1521966144847,15.8874053147865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.665957860122194,0.269141569828427,2.3503846290971,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0,1.5378032791413,1.94429899074283,0,0,0,0,0,16.2073444702647,2.0057340795713,1.03134418455488,0,0,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,0,0,4.75979933595425,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,9.1521966144847,15.8874053147865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.665957860122194,0.269141569828427,2.3503846290971,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr5:137542838..137542864,+ | |short_description=p@chr5:137542838..137542864,+ | ||
}} | }} |
Latest revision as of 20:56, 3 August 2015
Short description: | p@chr5:137542838..137542864, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137542838..137542864, + |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.11e-19 | 3 |
striated muscle cell | 1.11e-19 | 3 |
cardiac muscle cell | 1.11e-19 | 3 |
cardiac muscle myoblast | 1.11e-19 | 3 |
astrocyte of the cerebral cortex | 1.69e-13 | 2 |
astrocyte of the hippocampus | 1.69e-13 | 2 |
muscle precursor cell | 3.83e-10 | 6 |
muscle cell | 3.83e-10 | 6 |
myoblast | 3.83e-10 | 6 |
bone marrow cell | 2.90e-09 | 3 |
mesenchymal stem cell of the bone marrow | 2.90e-09 | 3 |
mesodermal cell | 9.05e-09 | 7 |
multi-potent skeletal muscle stem cell | 6.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.90e-14 | 2 |
chorion | 2.90e-14 | 2 |
allantois | 2.90e-14 | 2 |
extraembryonic membrane | 8.19e-10 | 3 |
extraembryonic structure | 8.19e-10 | 3 |
membranous layer | 8.19e-10 | 3 |
embryonic uterus | 1.43e-07 | 4 |
uterus | 1.43e-07 | 4 |
skeletal muscle tissue | 6.25e-07 | 9 |
striated muscle tissue | 6.25e-07 | 9 |
muscle tissue | 6.25e-07 | 9 |
multilaminar epithelium | 6.25e-07 | 9 |
epithelial vesicle | 6.25e-07 | 9 |
musculature | 6.25e-07 | 9 |
somite | 6.25e-07 | 9 |
myotome | 6.25e-07 | 9 |
presomitic mesoderm | 6.25e-07 | 9 |
presumptive segmental plate | 6.25e-07 | 9 |
dermomyotome | 6.25e-07 | 9 |
trunk paraxial mesoderm | 6.25e-07 | 9 |