FFCP PHASE1:Mm9::chr5:136254517..136254533,+: Difference between revisions
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{{FFCP|EntrezGene=17448|HGNC=|MCL_coexpression_id=635|UniProt=P08249|association_with_transcript=0bp_to_ENSMUST00000138101,NM_008617,uc008zyz.1_5end|description=CAGE_peak_1_at_Mdh2_5end|id=chr5:136254517..136254533,+|ontology_enrichment_celltype=CL:0002371!1.34e-07!118;CL:0000144!5.23e-07!121;CL:0000012!5.23e-07!121;CL:0002321!5.39e-07!70;CL:0000220!5.39e-07!70;CL:0000548!7.11e-07!115;CL:0000004!7.11e-07!115;CL:0000255!7.11e-07!115;CL:0000066!7.85e-07!25|ontology_enrichment_celltype_v019_2=CL:0002321,5.39e-07,70;CL:0000066,7.85e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.32e-09!15;UBERON:0001242!1.11e-07!13;UBERON:0000060!1.11e-07!13;UBERON:0001262!1.11e-07!13;UBERON:0004786!1.11e-07!13;UBERON:0007100!2.42e-07!18;UBERON:0000948!2.42e-07!18;UBERON:0005498!2.42e-07!18;UBERON:0004140!2.42e-07!18;UBERON:0009881!2.42e-07!18;UBERON:0004141!2.42e-07!18;UBERON:0003084!2.42e-07!18;UBERON:0007005!2.42e-07!18;UBERON:0004139!2.42e-07!18;UBERON:0004291!2.42e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-10,31;UBERON:0000344,5.32e-09,15;UBERON:0001242,1.11e-07,13;UBERON:0001262,1.11e-07,13;UBERON:0004786,1.11e-07,13;UBERON:0007100,2.42e-07,18;UBERON:0000948,2.42e-07,18;UBERON:0005498,2.42e-07,18;UBERON:0004140,2.42e-07,18;UBERON:0009881,2.42e-07,18;UBERON:0004141,2.42e-07,18;UBERON:0003084,2.42e-07,18;UBERON:0007005,2.42e-07,18;UBERON:0004139,2.42e-07,18;UBERON:0004291,2.42e-07,18|phase1_expression=68.2234088666422,665.147126960622,607.87898382442,692.038115470027,558.498738890177,276.497160838883,310.237586710858,66.111141602087,107.844161168177,107.435617581795,104.271742649333,123.965935078753,53.4146277385362,62.1559061199072,142.570978057104,100.427732625354,143.41018501627,44.7956274808698,44.9735342226823,50.0779789121676,101.711775020679,103.064007346519,152.540676857138,709.086417820378,596.464130774642,702.28569211267,648.727566215567,610.214530966438,410.83063286468,415.849714103886,322.396162492813,298.464416526027,268.168247386873,396.204202538597,153.669061707678,198.650401203398,160.27294466596,226.425612228667,200.021848198093,174.333406743275,201.763400394638,198.083190637949,143.711064497221,77.5524398729556,75.5258137585383,91.7733760808408,64.9384815808872,241.571873269535,173.991456725702,191.902310386318,159.444534231288,287.505128729943,47.8180427264549,92.8463541774521,81.3346993924763,182.911459021558,132.378449251706,128.402350977083,140.81225675828,195.19767135138,167.965321929137,152.480039431109,177.858959222228,124.636110843474,156.240885285582,139.254102529436,143.508452938316,168.287617730841,91.6616172806942,96.3942399688271,100.114681603258,229.377740476254,232.353705081097,99.8300013601875,83.1938688438292,124.094536192353,355.674295628026,231.11408193419,277.259792527519,114.081638886618,112.895752205374,116.684595004714,287.558488971422,195.278625680993,219.418283807499,260.746298144196,221.815078685002,133.27560376509,165.083101466341,142.527962361397,55.0742528533188,127.342733793245,206.031314113448,262.835454327617,270.956766075678,245.966761016437,250.693289935177,101.406041933944,134.309364379683,130.028963419805,82.8159308286881,156.558302445468,96.8259910885254,127.9920065676,256.541883598289,244.745630048945,244.16830694214,191.714734048302,28.7421050848361,81.7916186247185,107.907873248537,126.048708021226,124.071137523759,115.905710584967,74.904006445444,113.728265153356,83.304704126484,256.519259175923,198.152763636772,132.001749557086,172.035542880647,145.462575940567,203.167019727753,84.9064311333487,80.4275354163668,471.062809804642,108.911948175882,155.374807327293,113.981993684539,110.096119962545,93.7876235778184,59.6858172536106,95.6033761057521,84.3861009190091,129.451951760606,94.5866563685027,45.5221956410914,91.6879373396386,65.4551944343218,77.6530448221089,78.592747549473,88.5123102068871,79.7675235037697,65.2551861228646,45.7205274296923,73.5372754435038,63.8108744251753,74.2478674020975,105.628316537093,67.1326584595758,65.9816715614808,71.0194173065342,53.3850718513148,69.9986854709555,53.2975733296574,59.9093143123664,174.148870453682,196.356453128528,158.563232662741,176.056906655177,178.005279525652,186.184171550689,182.766935871782,191.058069026729,237.417086733675,261.368153899458,307.441318003964,244.973688286322,246.016975620653,374.630153028495,401.452744871078,511.115156038962,481.034302602692,450.799360616089,104.093524539243,57.6265829323993,862.062604804729,704.496309591682,71.0249874282329,74.5479716672008,105.800185745439,142.186884859456,163.225484182135,185.469985459745,426.127097266971,224.484675288827,150.298454862561,150.013179919028,136.084932809146,333.462000610716,366.137856487732,412.023294363286,104.507013425148,79.9739588268102,96.9286526788492,105.695039151718,112.298490070055,85.9865151855305,97.7636863941018,159.56656996595,176.780567549388,198.669433914099,129.549798037084,129.805492247121,129.728936774714,124.348748148824,119.28175137644,104.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17448 | |||
|HGNC= | |||
|MCL_coexpression_id=635 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P08249 | |||
|association_with_transcript=0bp_to_ENSMUST00000138101,NM_008617,uc008zyz.1_5end | |||
|cluster_id=chr5:136254517..136254533,+ | |||
|description=CAGE_peak_1_at_Mdh2_5end | |||
|id=chr5:136254517..136254533,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.34e-07!118;CL:0000144!5.23e-07!121;CL:0000012!5.23e-07!121;CL:0002321!5.39e-07!70;CL:0000220!5.39e-07!70;CL:0000548!7.11e-07!115;CL:0000004!7.11e-07!115;CL:0000255!7.11e-07!115;CL:0000066!7.85e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.39e-07,70;CL:0000066,7.85e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.32e-09!15;UBERON:0001242!1.11e-07!13;UBERON:0000060!1.11e-07!13;UBERON:0001262!1.11e-07!13;UBERON:0004786!1.11e-07!13;UBERON:0007100!2.42e-07!18;UBERON:0000948!2.42e-07!18;UBERON:0005498!2.42e-07!18;UBERON:0004140!2.42e-07!18;UBERON:0009881!2.42e-07!18;UBERON:0004141!2.42e-07!18;UBERON:0003084!2.42e-07!18;UBERON:0007005!2.42e-07!18;UBERON:0004139!2.42e-07!18;UBERON:0004291!2.42e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.83e-10,31;UBERON:0000344,5.32e-09,15;UBERON:0001242,1.11e-07,13;UBERON:0001262,1.11e-07,13;UBERON:0004786,1.11e-07,13;UBERON:0007100,2.42e-07,18;UBERON:0000948,2.42e-07,18;UBERON:0005498,2.42e-07,18;UBERON:0004140,2.42e-07,18;UBERON:0009881,2.42e-07,18;UBERON:0004141,2.42e-07,18;UBERON:0003084,2.42e-07,18;UBERON:0007005,2.42e-07,18;UBERON:0004139,2.42e-07,18;UBERON:0004291,2.42e-07,18 | |||
|phase1_expression=68.2234088666422,665.147126960622,607.87898382442,692.038115470027,558.498738890177,276.497160838883,310.237586710858,66.111141602087,107.844161168177,107.435617581795,104.271742649333,123.965935078753,53.4146277385362,62.1559061199072,142.570978057104,100.427732625354,143.41018501627,44.7956274808698,44.9735342226823,50.0779789121676,101.711775020679,103.064007346519,152.540676857138,709.086417820378,596.464130774642,702.28569211267,648.727566215567,610.214530966438,410.83063286468,415.849714103886,322.396162492813,298.464416526027,268.168247386873,396.204202538597,153.669061707678,198.650401203398,160.27294466596,226.425612228667,200.021848198093,174.333406743275,201.763400394638,198.083190637949,143.711064497221,77.5524398729556,75.5258137585383,91.7733760808408,64.9384815808872,241.571873269535,173.991456725702,191.902310386318,159.444534231288,287.505128729943,47.8180427264549,92.8463541774521,81.3346993924763,182.911459021558,132.378449251706,128.402350977083,140.81225675828,195.19767135138,167.965321929137,152.480039431109,177.858959222228,124.636110843474,156.240885285582,139.254102529436,143.508452938316,168.287617730841,91.6616172806942,96.3942399688271,100.114681603258,229.377740476254,232.353705081097,99.8300013601875,83.1938688438292,124.094536192353,355.674295628026,231.11408193419,277.259792527519,114.081638886618,112.895752205374,116.684595004714,287.558488971422,195.278625680993,219.418283807499,260.746298144196,221.815078685002,133.27560376509,165.083101466341,142.527962361397,55.0742528533188,127.342733793245,206.031314113448,262.835454327617,270.956766075678,245.966761016437,250.693289935177,101.406041933944,134.309364379683,130.028963419805,82.8159308286881,156.558302445468,96.8259910885254,127.9920065676,256.541883598289,244.745630048945,244.16830694214,191.714734048302,28.7421050848361,81.7916186247185,107.907873248537,126.048708021226,124.071137523759,115.905710584967,74.904006445444,113.728265153356,83.304704126484,256.519259175923,198.152763636772,132.001749557086,172.035542880647,145.462575940567,203.167019727753,84.9064311333487,80.4275354163668,471.062809804642,108.911948175882,155.374807327293,113.981993684539,110.096119962545,93.7876235778184,59.6858172536106,95.6033761057521,84.3861009190091,129.451951760606,94.5866563685027,45.5221956410914,91.6879373396386,65.4551944343218,77.6530448221089,78.592747549473,88.5123102068871,79.7675235037697,65.2551861228646,45.7205274296923,73.5372754435038,63.8108744251753,74.2478674020975,105.628316537093,67.1326584595758,65.9816715614808,71.0194173065342,53.3850718513148,69.9986854709555,53.2975733296574,59.9093143123664,174.148870453682,196.356453128528,158.563232662741,176.056906655177,178.005279525652,186.184171550689,182.766935871782,191.058069026729,237.417086733675,261.368153899458,307.441318003964,244.973688286322,246.016975620653,374.630153028495,401.452744871078,511.115156038962,481.034302602692,450.799360616089,104.093524539243,57.6265829323993,862.062604804729,704.496309591682,71.0249874282329,74.5479716672008,105.800185745439,142.186884859456,163.225484182135,185.469985459745,426.127097266971,224.484675288827,150.298454862561,150.013179919028,136.084932809146,333.462000610716,366.137856487732,412.023294363286,104.507013425148,79.9739588268102,96.9286526788492,105.695039151718,112.298490070055,85.9865151855305,97.7636863941018,159.56656996595,176.780567549388,198.669433914099,129.549798037084,129.805492247121,129.728936774714,124.348748148824,119.28175137644,104.912064492301,111.526123080262,102.707521069939,94.8491076633957,135.9078995281,76.1971494594979,97.8730692368164,97.6677916848575,115.681126099777,173.836093702733,185.258312203533,44.3407656399851,101.188413885439,83.4380679383172,64.3333875087963,62.1929157964531,65.49494665975,59.2728665806174,48.1980110208763,37.3595291531673,46.0646554469452,38.7475087837694,49.8144476735844,54.9138242333548,42.5268232229644,88.9668575241706,170.242479035256,91.9599190545598,73.3991745170588,161.834994707694,129.636125370977,91.8035694109382,451.418017841419,132.197943935412,149.538039065613,125.591840878222,120.201305370134,102.932987426066,100.209091899247,120.633589099119,136.483485644583,107.122987823508,107.963962317727,72.5313835414253,66.0623389605517,47.2372182125371,53.615289966074,53.0980553359851,104.152892910487,93.1156555451433,102.789768466964,101.583851150986,78.7033978736454,89.1577611430363,46.8958511025982,74.8644494607915,66.0516824085855,71.6846538309992,59.8186150839484,69.7901191795265,70.5839488602736,89.1281331263178,75.6609733661521,74.8375785970395,83.2982378201669,78.6544318478138,94.993064123755,106.540955460924,102.526722298089,60.4247810670596,74.3637000766075,61.0335532910523,65.8617140215462,60.6411507535933,53.0175106176548,302.557108421785,157.426081406923,81.5054101405757,66.2501846161944,81.6707865700428,84.3890687381016,83.3834789098254,76.8694661973916,90.5985031867249,86.2100946313733,80.4323847541746,197.616817929129,69.4357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| |||
|short_description=p1@Mdh2 | |||
}} |
Revision as of 19:37, 3 August 2015
Short description: | p1@Mdh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mdh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:635 |
Association with transcript: | 0bp_to_ENSMUST00000138101, NM_008617, uc008zyz.1_5end |
EntrezGene: | 17448 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.39e-07 | 70 |
epithelial cell | 7.85e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.83e-10 | 31 |
mucosa | 5.32e-09 | 15 |
intestinal mucosa | 1.11e-07 | 13 |
wall of intestine | 1.11e-07 | 13 |
gastrointestinal system mucosa | 1.11e-07 | 13 |
primary circulatory organ | 2.42e-07 | 18 |
heart | 2.42e-07 | 18 |
primitive heart tube | 2.42e-07 | 18 |
primary heart field | 2.42e-07 | 18 |
anterior lateral plate mesoderm | 2.42e-07 | 18 |
heart tube | 2.42e-07 | 18 |
heart primordium | 2.42e-07 | 18 |
cardiac mesoderm | 2.42e-07 | 18 |
cardiogenic plate | 2.42e-07 | 18 |
heart rudiment | 2.42e-07 | 18 |