FFCP PHASE1:Hg19::chrX:83004216..83004220,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:83004216..83004220,-
|short_description=p@chrX:83004216..83004220,-
|description=CAGE_peak_at_chrX:83004216..83004220,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:83004216..83004220,- | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chrX:83004216..83004220,- | |||
|id=chrX:83004216..83004220,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.86e-43;5!CL:0000540;4.70e-24;6!CL:0000404;4.70e-24;6!CL:0002321;2.49e-14;15!CL:0000039;9.07e-12;7!CL:0000586;9.07e-12;7!CL:0002379;6.05e-10;1!CL:0000148;2.06e-08;10!CL:0002319;4.49e-08;25!CL:0000710;3.80e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.04e-43,5;CL:0000540,5.46e-24,6;CL:0000031,5.46e-24,6;CL:0000404,5.46e-24,6;CL:0000047,4.62e-18,8;CL:0000039,1.13e-11,7;CL:0000586,1.13e-11,7;CL:0000133,2.32e-10,59;CL:0002379,8.99e-10,1;CL:0000148,1.72e-08,10;CL:0000541,1.72e-08,10;CL:0000221,2.59e-08,72;CL:0002319,4.57e-08,25;CL:0000710,3.65e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;4.70e-24;6!UBERON:0009117;2.17e-08;10!UBERON:0005564;2.17e-08;10!CL:0000133;6.50e-08;59 | |||
|ontology_enrichment_disease=DOID:162!5.99e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3620;6.05e-10;1!DOID:3565;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.99e-10,1;DOID:3565,8.99e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.30e-10;8!UBERON:0000922;4.37e-09;49!UBERON:0003135;1.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.80e-10,8;UBERON:0003135,1.31e-07,11 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,1.95157929807353,1.19276791489337,3.71820617182459,1.7622379352613,1.51392510525377,7.66452454059243,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0,0,0.464841513839837,0.120859449591622,0.40101294060657,0.0920809889358963,0,0.364182336013434,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.330569830721956,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0.403599414382095,0.851692475380653,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0.63337622438398,0,0,0,0.409074730008619,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.520874984799877,0.885741385813839,0.482385754501632,1.52581736317083,0,0.295547618953547,0.438770794307945,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.179515288819544,0,0,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.269604531922708,0,0.702793337176017,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,0,0.207376382794494,0.664653872707185,0,0,0,0,0.138674673013139,0.867798691675654,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0.977756913674015,0.0801588202515337,0.213452994739353,0.39961921916426,0,0.114536596165916,1.02956998717179,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.136203406111576,3.3758161177654,5.22649859069488,20.7720169014593,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,3.90484047686282,0.3755727921195,0,0.110929051536852,0,0.553394539744923,0,0,0.285465333544967,1.17632909849086,1.40500471742064,0,0,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0.796191777397232,0.400027764663154,0.343395705182793,0,0,0,0.643324774124777,0.521988583930423,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0.192914038270915,0.337884881306145,0.256241518587947,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0.436838552768056,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0.6124909547064,0.321146125482298,0,0,0,0,0,0.645902582527404,0,0.196295437002051,0.11796972334774,0.366857197043358,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0.992422356778588,0.527613733078862,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0,0.236387681767936,0.111231401892069,0,0.314231179832004,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0.632054446930906,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.994753875806841,0.594600453887843,0,0,0.150962843566674,0.154348316215889,0.655678681511872,1.88126918544609,0.490296643507811,0.235676547101626,0.588925401344836,0,0.4226557275834,0.509781344063451,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0.705789743431384,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,1.0580536810308,0,0,1.29787968637137,0.126166424835079,0.218531143927391,0.126698501011437,0.713921808193872,1.06886962106224,1.28652859348783,2.25636785363138,0.0757786982182394,0.267964130156178,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,1.95157929807353,1.19276791489337,3.71820617182459,1.7622379352613,1.51392510525377,7.66452454059243,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0,0,0.464841513839837,0.120859449591622,0.40101294060657,0.0920809889358963,0,0.364182336013434,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.330569830721956,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0.403599414382095,0.851692475380653,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0.63337622438398,0,0,0,0.409074730008619,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.520874984799877,0.885741385813839,0.482385754501632,1.52581736317083,0,0.295547618953547,0.438770794307945,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.179515288819544,0,0,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.269604531922708,0,0.702793337176017,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,0,0.207376382794494,0.664653872707185,0,0,0,0,0.138674673013139,0.867798691675654,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0.977756913674015,0.0801588202515337,0.213452994739353,0.39961921916426,0,0.114536596165916,1.02956998717179,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.136203406111576,3.3758161177654,5.22649859069488,20.7720169014593,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,3.90484047686282,0.3755727921195,0,0.110929051536852,0,0.553394539744923,0,0,0.285465333544967,1.17632909849086,1.40500471742064,0,0,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0.796191777397232,0.400027764663154,0.343395705182793,0,0,0,0.643324774124777,0.521988583930423,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0.438568099157414,0.176689145945881,0.192914038270915,0.337884881306145,0.256241518587947,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0.436838552768056,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0.6124909547064,0.321146125482298,0,0,0,0,0,0.645902582527404,0,0.196295437002051,0.11796972334774,0.366857197043358,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0.992422356778588,0.527613733078862,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0,0.236387681767936,0.111231401892069,0,0.314231179832004,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0.632054446930906,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.994753875806841,0.594600453887843,0,0,0.150962843566674,0.154348316215889,0.655678681511872,1.88126918544609,0.490296643507811,0.235676547101626,0.588925401344836,0,0.4226557275834,0.509781344063451,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0.705789743431384,0,0,0.458729283404541,0,0.157771562193185,0.0679914901909147,0,1.0580536810308,0,0,1.29787968637137,0.126166424835079,0.218531143927391,0.126698501011437,0.713921808193872,1.06886962106224,1.28652859348783,2.25636785363138,0.0757786982182394,0.267964130156178,0,0.20686599172379,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chrX:83004216..83004220,- | |||
}} | }} |
Latest revision as of 09:46, 1 August 2015
Short description: | p@chrX:83004216..83004220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:83004216..83004220, - |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.04e-43 | 5 |
neuron | 5.46e-24 | 6 |
neuroblast | 5.46e-24 | 6 |
electrically signaling cell | 5.46e-24 | 6 |
neuronal stem cell | 4.62e-18 | 8 |
germ line cell | 1.13e-11 | 7 |
germ cell | 1.13e-11 | 7 |
neurectodermal cell | 2.32e-10 | 59 |
meningothelial cell | 8.99e-10 | 1 |
melanocyte | 1.72e-08 | 10 |
melanoblast | 1.72e-08 | 10 |
ectodermal cell | 2.59e-08 | 72 |
neural cell | 4.57e-08 | 25 |
neurecto-epithelial cell | 3.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 2.80e-10 | 8 |
male reproductive organ | 1.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.99e-10 | 1 |
meningioma | 8.99e-10 | 1 |