FFCP PHASE1:Hg19::chrX:48770828..48770832,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48770828..48770832,- to FFCP PHASE1:Hg19::chrX:48770828..48770832,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:48770828..48770832,- | |||
|coexpression_cluster_id=C4873 | |||
|description=CAGE_peak_at_chrX:48770828..48770832,- | |||
|id=chrX:48770828..48770832,- | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-31!172;CL:0000566!1.12e-31!172;CL:0000988!1.99e-30!182;CL:0002032!5.30e-29!165;CL:0000837!5.30e-29!165;CL:0000738!3.52e-28!140;CL:0000542!2.21e-25!53;CL:0000051!2.21e-25!53;CL:0000838!9.52e-25!52;CL:0002031!1.48e-21!124;CL:0002087!1.24e-20!119;CL:0000945!2.19e-12!24;CL:0000826!2.19e-12!24;CL:0000084!5.15e-12!25;CL:0000827!5.15e-12!25;CL:0000791!2.59e-11!18;CL:0000789!2.59e-11!18;CL:0002420!2.59e-11!18;CL:0002419!2.59e-11!18;CL:0000790!2.59e-11!18;CL:0000763!8.02e-09!112;CL:0000049!8.02e-09!112;CL:0000236!2.07e-08!14;CL:0000625!1.60e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.09e-23;53!CL:0000084;7.18e-19;25!CL:0000791;7.33e-19;18!CL:0000789;7.33e-19;18!CL:0002419;7.33e-19;18!CL:0000945;1.26e-17;24!CL:0000625;4.37e-12;11!CL:0000236;4.54e-12;13!CL:0000094;2.74e-09;8!CL:0002087;3.94e-08;104!CL:0000624;2.80e-07;6!CL:0002322;7.19e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.10e-39,53;CL:0000051,2.10e-39,53;CL:0000838,2.69e-38,52;CL:0000037,4.33e-35,168;CL:0000988,6.63e-34,177;CL:0000738,2.81e-32,136;CL:0002032,4.69e-31,161;CL:0000837,4.69e-31,161;CL:0002031,1.41e-22,120;CL:0002087,3.15e-21,115;CL:0000084,6.51e-19,25;CL:0000827,6.51e-19,25;CL:0000791,7.40e-19,18;CL:0000789,7.40e-19,18;CL:0002420,7.40e-19,18;CL:0002419,7.40e-19,18;CL:0000790,7.40e-19,18;CL:0000945,1.39e-17,24;CL:0000826,1.39e-17,24;CL:0000236,7.17e-13,14;CL:0000625,3.85e-12,11;CL:0000094,2.17e-09,8;CL:0000624,3.13e-07,6;CL:0002322,6.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;5.09e-23;53!CL:0000790;7.33e-19;18 | |||
|ontology_enrichment_disease=DOID:2531!3.89e-07!51;DOID:0060083!3.89e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.64e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.71e-08,10;DOID:2531,7.74e-07,51;DOID:0060083,7.74e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.74e-09!102;UBERON:0003061!8.74e-09!102;UBERON:0002193!1.31e-08!112;UBERON:0000178!1.62e-08!15;UBERON:0000179!1.62e-08!15;UBERON:0000463!1.62e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.80e-12;15!UBERON:0000179;2.80e-12;15!UBERON:0000463;2.80e-12;15!UBERON:0002390;2.22e-09;32!UBERON:0002193;4.11e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.80e-12,15;UBERON:0000179,1.80e-12,15;UBERON:0000463,1.80e-12,15;UBERON:0002193,7.50e-07,108 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.612002073732759,0.940364164434263,0,0.410623275218653,0.376627918784408,1.22261449196722,0.821005894499457,1.10195093839151,10.2274711980715,1.53531759238885,1.39334510984468,1.83884244895785,0.6024118375565,1.10926203050036,3.95082722959538,6.53978469442139,2.34880351467878,0,3.20871115952227,1.51907609501096,0,0.647787332037959,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0.929119112685311,1.43846196161075,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,0,2.55734850319616,0.329851300186716,0.398927315243264,0,2.61188314765726,0,2.4912889959823,1.50749199154046,0,0.217188844705117,1.21079900526674,0.736555271975129,3.16462387440884,0.211255286311942,0.850417199860174,0.628975936525128,0.336985893439485,0.450530678524519,0,0.570025487482497,0.59675003159727,1.0959849225878,8.79981222306614,3.82297027883492,6.22656477704488,5.54749289336459,4.40435585739614,4.59801951963587,7.93253847341835,3.81621501814146,5.12291672198504,8.80855784056408,9.17455747500549,1.32171328579026,1.12101712596307,1.05353633910031,5.90129310341499,9.82526906872912,6.99045096598331,2.84217042164153,5.54067853277104,2.8406868344084,3.89653456815823,6.68462741311041,5.00830042707223,5.31681347000691,4.06205795647523,19.0856066391256,20.1591988717811,11.18177751305,8.5668505513613,2.60822777161547,3.41059095272739,4.28065324943541,6.27213142829861,1.35971211237079,1.14966148080576,3.4362744548263,4.04831507231205,11.1497895013434,7.81300144627702,5.70271226669025,2.86092726247768,2.8157054453972,3.74792179657038,4.02521328474829,9.03240796613151,4.03213486449465,4.54648332831962,5.35850294366356,0,1.34140171940727,0.383587685530591,0.722878304769133,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.614843499851882,0.589405839739707,0,0.370784442784429,0.649094787309367,0.522389211897802,0.664789802594326,8.10868122638163,1.14398982156026,1.11437250398869,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0.732186172644509,0,0.81014194788176,0,0,0,0,0,0.183201743930407,9.22462922052443,15.511210565933,2.61656431285521,0,0,0,0,0.354668382198357,0,1.06748995729705,1.2333377420858,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0.491337269247072,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0,8.53815942907168,6.22889911110981,10.4574548582567,2.90250954043037,10.5974757367764,5.47466038613745,0,0,0,0,0,1.18306800039844,0.505754070234305,0.964044119533928,0.661763836394364,0.871517776369625,0.71181185733329,0.674156540800822,0.392442930250692,1.53898862778556,0,0,0,0,0,0,0,1.32438929824395,0.368965315629341,0.857839051492628,0.219500570817251,2.24803506515239,0.301586917234893,0.462942225792648,0.325808305310325,0,0,0.34779121492523,0.117408694235822,1.01056513432752,2.77791307545966,0.380508304469197,0.790204397959275,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0,0.616339038092582,3.93923419527467,16.8620345497845,2.27236380167484,0.253991577168676,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,2.83698264046557,0.532844358032199,0,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0,7.06136407159222,2.75843064282698,6.90008239550455,3.85029108839245,0.254094624222463,0,0,0.167516265334349,0,13.4821264310493,20.9413021442817,3.31532410748828,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0,1.6541442089831,4.52999821719095,1.70764092485511,0.909382714338778,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0,0.262248829918848,0.451199612907412,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.812839312631559,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,2.19259876645935,4.18296721639841,0.512900250232778,0.984043937099117,0,0.206082023295445,0.27470839445503,0.495056999523528,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0.6970372701606,0.3080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| ||
|short_description=p@chrX:48770828..48770832,- | |||
}} | }} |
Latest revision as of 08:35, 1 August 2015
Short description: | p@chrX:48770828..48770832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:48770828..48770832, - |
Coexpression cluster: | C4873_lymphangiectasia_Eosinophils_Mast_Neutrophils_CD4_b_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.10e-39 | 53 |
common lymphoid progenitor | 2.10e-39 | 53 |
lymphoid lineage restricted progenitor cell | 2.69e-38 | 52 |
hematopoietic stem cell | 4.33e-35 | 168 |
hematopoietic cell | 6.63e-34 | 177 |
leukocyte | 2.81e-32 | 136 |
hematopoietic oligopotent progenitor cell | 4.69e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.69e-31 | 161 |
hematopoietic lineage restricted progenitor cell | 1.41e-22 | 120 |
nongranular leukocyte | 3.15e-21 | 115 |
T cell | 6.51e-19 | 25 |
pro-T cell | 6.51e-19 | 25 |
mature alpha-beta T cell | 7.40e-19 | 18 |
alpha-beta T cell | 7.40e-19 | 18 |
immature T cell | 7.40e-19 | 18 |
mature T cell | 7.40e-19 | 18 |
immature alpha-beta T cell | 7.40e-19 | 18 |
lymphocyte of B lineage | 1.39e-17 | 24 |
pro-B cell | 1.39e-17 | 24 |
B cell | 7.17e-13 | 14 |
CD8-positive, alpha-beta T cell | 3.85e-12 | 11 |
granulocyte | 2.17e-09 | 8 |
CD4-positive, alpha-beta T cell | 3.13e-07 | 6 |
embryonic stem cell | 6.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 1.80e-12 | 15 |
haemolymphatic fluid | 1.80e-12 | 15 |
organism substance | 1.80e-12 | 15 |
hemolymphoid system | 7.50e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.71e-08 | 10 |
hematologic cancer | 7.74e-07 | 51 |
immune system cancer | 7.74e-07 | 51 |