FFCP PHASE1:Hg19::chrX:129812794..129812795,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:129812794..129812795,+
|short_description=p@chrX:129812794..129812795,+
|description=CAGE_peak_at_chrX:129812794..129812795,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:129812794..129812795,+ | |||
|coexpression_cluster_id=C583 | |||
|description=CAGE_peak_at_chrX:129812794..129812795,+ | |||
|id=chrX:129812794..129812795,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.88e-114!42;CL:0000860!3.87e-106!45;CL:0002009!1.32e-88!65;CL:0002194!1.45e-87!63;CL:0000576!1.45e-87!63;CL:0000040!1.45e-87!63;CL:0000559!1.45e-87!63;CL:0000557!2.66e-80!71;CL:0000766!2.73e-78!76;CL:0000839!7.45e-78!70;CL:0000763!5.30e-60!112;CL:0000049!5.30e-60!112;CL:0002087!3.09e-48!119;CL:0000738!1.09e-47!140;CL:0002031!1.18e-43!124;CL:0000037!2.42e-40!172;CL:0000566!2.42e-40!172;CL:0002032!7.53e-39!165;CL:0000837!7.53e-39!165;CL:0000988!1.78e-37!182;CL:0000134!3.48e-13!358;CL:0002320!1.05e-12!365;CL:0002393!4.76e-12!9;CL:0002397!4.76e-12!9;CL:0000219!5.21e-11!390;CL:0000048!5.42e-09!430;CL:0000034!5.55e-09!444;CL:0000723!1.05e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-143;33!CL:0002057;1.39e-143;33!CL:0000473;6.62e-105;39!CL:0000234;6.62e-105;39!CL:0000576;4.53e-81;48!CL:0000766;2.70e-45;69!CL:0000763;7.14e-24;100!CL:0002087;1.56e-17;104!CL:0000738;1.41e-12;136!CL:0000988;9.55e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-146,42;CL:0002057,1.54e-146,42;CL:0000473,1.23e-134,48;CL:0000234,1.23e-134,48;CL:0002194,2.56e-106,59;CL:0000576,2.56e-106,59;CL:0000040,2.56e-106,59;CL:0000559,2.56e-106,59;CL:0002009,1.16e-102,61;CL:0000839,1.77e-94,66;CL:0000557,5.50e-93,67;CL:0000766,3.78e-91,72;CL:0000763,4.46e-62,108;CL:0000049,4.46e-62,108;CL:0002087,1.42e-51,115;CL:0002031,3.80e-49,120;CL:0000738,3.18e-45,136;CL:0002032,2.14e-39,161;CL:0000837,2.14e-39,161;CL:0000037,1.84e-37,168;CL:0000988,3.39e-35,177;CL:0000134,6.50e-14,354;CL:0002320,1.70e-13,361;CL:0000219,4.99e-12,386;CL:0000034,1.69e-10,441;CL:0000048,3.14e-10,427;CL:0000723,5.57e-10,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-106;42!CL:0000049;4.97e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.77e-70!80;UBERON:0001474!1.51e-64!86;UBERON:0002390!8.90e-61!102;UBERON:0003061!8.90e-61!102;UBERON:0002193!2.20e-54!112;UBERON:0004765!1.98e-53!101;UBERON:0001434!1.98e-53!101;UBERON:0002405!6.72e-48!115;UBERON:0002204!4.10e-28!167;UBERON:0003081!7.70e-23!216;UBERON:0002384!4.77e-12!375;UBERON:0000926!4.16e-08!448;UBERON:0004120!4.16e-08!448;UBERON:0006603!4.16e-08!448;UBERON:0003127!4.52e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.70e-81,76;UBERON:0001474,6.58e-75,82;UBERON:0004765,1.06e-67,90;UBERON:0002405,2.59e-65,93;UBERON:0002390,1.18e-61,98;UBERON:0003061,1.18e-61,98;UBERON:0001434,2.71e-60,100;UBERON:0002193,2.41e-55,108;UBERON:0002204,2.22e-33,167;UBERON:0003081,3.34e-26,203;UBERON:0000926,2.71e-14,315;UBERON:0004120,2.71e-14,315;UBERON:0006603,2.71e-14,315;UBERON:0002384,6.28e-13,371 | |||
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| ||
|short_description=p@chrX:129812794..129812795,+ | |||
}} | }} |
Latest revision as of 05:41, 1 August 2015
Short description: | p@chrX:129812794..129812795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:129812794..129812795, + |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.54e-146 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-146 | 42 |
defensive cell | 1.23e-134 | 48 |
phagocyte | 1.23e-134 | 48 |
monopoietic cell | 2.56e-106 | 59 |
monocyte | 2.56e-106 | 59 |
monoblast | 2.56e-106 | 59 |
promonocyte | 2.56e-106 | 59 |
macrophage dendritic cell progenitor | 1.16e-102 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-94 | 66 |
granulocyte monocyte progenitor cell | 5.50e-93 | 67 |
myeloid leukocyte | 3.78e-91 | 72 |
myeloid cell | 4.46e-62 | 108 |
common myeloid progenitor | 4.46e-62 | 108 |
nongranular leukocyte | 1.42e-51 | 115 |
hematopoietic lineage restricted progenitor cell | 3.80e-49 | 120 |
leukocyte | 3.18e-45 | 136 |
hematopoietic oligopotent progenitor cell | 2.14e-39 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-39 | 161 |
hematopoietic stem cell | 1.84e-37 | 168 |
hematopoietic cell | 3.39e-35 | 177 |
mesenchymal cell | 6.50e-14 | 354 |
connective tissue cell | 1.70e-13 | 361 |
motile cell | 4.99e-12 | 386 |
stem cell | 1.69e-10 | 441 |
multi fate stem cell | 3.14e-10 | 427 |
somatic stem cell | 5.57e-10 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.70e-81 | 76 |
bone element | 6.58e-75 | 82 |
skeletal element | 1.06e-67 | 90 |
immune system | 2.59e-65 | 93 |
hematopoietic system | 1.18e-61 | 98 |
blood island | 1.18e-61 | 98 |
skeletal system | 2.71e-60 | 100 |
hemolymphoid system | 2.41e-55 | 108 |
musculoskeletal system | 2.22e-33 | 167 |
lateral plate mesoderm | 3.34e-26 | 203 |
mesoderm | 2.71e-14 | 315 |
mesoderm-derived structure | 2.71e-14 | 315 |
presumptive mesoderm | 2.71e-14 | 315 |
connective tissue | 6.28e-13 | 371 |