FFCP PHASE1:Hg19::chr9:91985535..91985584,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:91985535..91985584,- to FFCP PHASE1:Hg19::chr9:91985535..91985584,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:91985535..91985584,- | |||
|coexpression_cluster_id=C460 | |||
|description=CAGE_peak_at_chr9:91985535..91985584,- | |||
|id=chr9:91985535..91985584,- | |||
|ontology_enrichment_celltype=CL:0000037!1.72e-26!172;CL:0000566!1.72e-26!172;CL:0000738!1.11e-25!140;CL:0002032!1.13e-25!165;CL:0000837!1.13e-25!165;CL:0000988!1.55e-23!182;CL:0002087!1.87e-23!119;CL:0002031!5.57e-21!124;CL:0000542!1.45e-18!53;CL:0000051!1.45e-18!53;CL:0000838!3.28e-18!52;CL:0002057!9.65e-12!42;CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000860!6.42e-11!45;CL:0000791!1.55e-10!18;CL:0000789!1.55e-10!18;CL:0002420!1.55e-10!18;CL:0002419!1.55e-10!18;CL:0000790!1.55e-10!18;CL:0000763!1.10e-09!112;CL:0000049!1.10e-09!112;CL:0000766!3.54e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.94e-13;25!CL:0000791;4.34e-13;18!CL:0000789;4.34e-13;18!CL:0002419;4.34e-13;18!CL:0000542;2.97e-11;53!CL:0000624;2.10e-07;6!CL:0002087;2.13e-07;104!CL:0000625;7.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.44e-21,136;CL:0002032,1.85e-20,161;CL:0000837,1.85e-20,161;CL:0000037,2.68e-20,168;CL:0002087,5.62e-20,115;CL:0002031,1.29e-18,120;CL:0000988,4.29e-18,177;CL:0000542,4.49e-18,53;CL:0000051,4.49e-18,53;CL:0000838,1.52e-17,52;CL:0000084,2.10e-13,25;CL:0000827,2.10e-13,25;CL:0000791,4.10e-13,18;CL:0000789,4.10e-13,18;CL:0002420,4.10e-13,18;CL:0002419,4.10e-13,18;CL:0000790,4.10e-13,18;CL:0000860,5.73e-10,42;CL:0002057,5.73e-10,42;CL:0000473,7.28e-08,48;CL:0000234,7.28e-08,48;CL:0000624,1.51e-07,6;CL:0000766,2.02e-07,72;CL:0000625,8.75e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.34e-13;18!CL:0000051;2.97e-11;53!UBERON:0006601;3.77e-08;82!CL:0002057;6.20e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-30!115;UBERON:0001049!3.65e-29!57;UBERON:0005068!3.65e-29!57;UBERON:0006241!3.65e-29!57;UBERON:0007135!3.65e-29!57;UBERON:0002780!3.82e-25!41;UBERON:0001890!3.82e-25!41;UBERON:0006240!3.82e-25!41;UBERON:0003080!4.84e-24!42;UBERON:0002616!2.93e-23!59;UBERON:0001017!5.32e-23!82;UBERON:0000955!7.42e-22!69;UBERON:0006238!7.42e-22!69;UBERON:0005743!1.89e-21!86;UBERON:0002020!1.06e-20!34;UBERON:0003528!1.06e-20!34;UBERON:0001893!1.10e-20!34;UBERON:0000073!4.58e-20!94;UBERON:0001016!4.58e-20!94;UBERON:0002791!4.77e-20!33;UBERON:0001869!4.07e-19!32;UBERON:0003075!1.16e-15!86;UBERON:0007284!1.16e-15!86;UBERON:0002619!3.38e-15!22;UBERON:0000956!6.68e-15!25;UBERON:0000203!6.68e-15!25;UBERON:0002346!6.89e-15!90;UBERON:0001950!9.53e-14!20;UBERON:0003056!3.82e-13!61;UBERON:0000153!1.40e-08!129;UBERON:0007811!1.40e-08!129;UBERON:0002390!1.66e-08!102;UBERON:0003061!1.66e-08!102;UBERON:0000033!2.42e-07!123;UBERON:0002308!2.62e-07!9;UBERON:0000125!2.62e-07!9;UBERON:0002193!3.13e-07!112;UBERON:0002420!3.40e-07!9;UBERON:0007245!3.40e-07!9;UBERON:0010009!3.40e-07!9;UBERON:0010011!3.40e-07!9;UBERON:0000454!3.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.21e-26;41!UBERON:0001890;3.21e-26;41!UBERON:0003528;1.03e-24;34!UBERON:0002020;1.03e-24;34!UBERON:0001893;1.19e-24;34!UBERON:0000073;1.51e-24;53!UBERON:0002616;1.51e-24;53!UBERON:0002791;5.84e-24;32!UBERON:0001869;8.00e-24;32!UBERON:0002619;9.11e-24;22!UBERON:0001950;2.12e-21;20!UBERON:0000956;4.57e-20;25!UBERON:0000203;4.57e-20;25!UBERON:0000955;8.51e-15;68!UBERON:0001017;4.88e-14;75!UBERON:0001016;5.91e-13;83!UBERON:0000125;9.67e-11;9!UBERON:0002308;9.67e-11;9!UBERON:0002420;1.58e-10;9!UBERON:0007245;1.58e-10;9!UBERON:0010009;1.58e-10;9!UBERON:0010011;1.58e-10;9!UBERON:0000454;1.58e-10;9!UBERON:0007023;2.56e-09;114!UBERON:0004732;7.47e-09;13!UBERON:0001894;1.32e-08;7!UBERON:0009663;2.10e-08;7!UBERON:0002298;2.15e-08;6!UBERON:0001871;6.62e-08;6!UBERON:0004733;8.91e-08;12!UBERON:0002028;8.91e-08;12!UBERON:0000200;1.28e-07;6!UBERON:0000349;3.69e-07;5!UBERON:0001872;4.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.06e-46,56;UBERON:0005068,4.06e-46,56;UBERON:0006241,4.06e-46,56;UBERON:0007135,4.06e-46,56;UBERON:0000073,1.14e-42,53;UBERON:0002616,1.14e-42,53;UBERON:0002780,2.45e-36,41;UBERON:0001890,2.45e-36,41;UBERON:0003080,2.45e-36,41;UBERON:0006240,2.45e-36,41;UBERON:0000955,1.66e-34,68;UBERON:0006238,1.66e-34,68;UBERON:0001017,4.02e-32,81;UBERON:0003528,3.39e-29,34;UBERON:0002020,3.39e-29,34;UBERON:0001893,3.61e-29,34;UBERON:0001016,1.61e-28,89;UBERON:0003075,1.97e-28,82;UBERON:0007284,1.97e-28,82;UBERON:0007023,2.90e-28,114;UBERON:0002791,7.31e-27,32;UBERON:0001869,1.12e-26,32;UBERON:0002346,2.93e-26,86;UBERON:0002619,1.28e-23,22;UBERON:0003056,1.00e-22,61;UBERON:0001950,2.87e-21,20;UBERON:0000956,6.13e-20,25;UBERON:0000203,6.13e-20,25;UBERON:0010371,1.15e-18,104;UBERON:0010314,4.27e-12,132;UBERON:0000125,7.36e-11,9;UBERON:0002308,7.36e-11,9;UBERON:0003076,9.02e-11,15;UBERON:0003057,9.02e-11,15;UBERON:0002420,1.12e-10,9;UBERON:0007245,1.12e-10,9;UBERON:0010009,1.12e-10,9;UBERON:0010011,1.12e-10,9;UBERON:0000454,1.12e-10,9;UBERON:0004732,8.74e-09,13;UBERON:0001894,1.41e-08,7;UBERON:0006222,1.41e-08,7;UBERON:0009663,1.60e-08,7;UBERON:0002298,2.44e-08,6;UBERON:0001871,5.60e-08,6;UBERON:0004121,8.34e-08,171;UBERON:0000924,8.34e-08,171;UBERON:0006601,8.34e-08,171;UBERON:0004733,1.04e-07,12;UBERON:0002028,1.04e-07,12;UBERON:0007277,1.04e-07,12;UBERON:0000200,1.37e-07,6;UBERON:0000349,3.31e-07,5;UBERON:0001872,4.53e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,0.125542639594803,0.305653622991805,0.246301768349837,0.472264687882075,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,4.26069603191659,1.70603078984906,0,1.10799081706375,3.40925560699241,2.38711957787437,0,0,0,3.78035420826868,1.51150377475524,2.42584061187816,0.929716147622738,0.411167888021826,0.619412741790207,1.1507695692886,1.5369642391746,0,0.689491361473237,2.5819387343353,0,1.69418105588344,1.09162460023138,0.674170453335254,0,0,0,0.659702600373432,4.58766412529753,0.852449501065388,2.03146467040009,2.26954089876456,0.622822248995575,2.51248665256743,6.77927793946262,0.434377689410233,3.02699751316684,0.736555271975129,1.26584954976354,1.69004229049553,3.18906449947565,2.09658645508376,3.36985893439485,2.70318407114711,5.6253955343978,1.42506371870624,1.59133341759272,0.730656615058536,0,1.63841583378639,1.77901850772711,0.426730222566507,0,2.29900975981793,1.32208974556972,1.90810750907073,2.84606484554724,2.34894875748376,1.14681968437569,0,0,0,7.47497126432566,7.8602152549833,5.75684197198626,1.33749196312542,7.49621213257258,8.04861269749047,0,0.557052284425868,1.76763544484902,2.21533894583621,4.06205795647523,2.5618263945135,1.69077151827842,3.78207180588455,3.31620021343018,3.47763702882063,13.4940772477475,6.68852070224283,9.40819714244791,2.15287751125376,2.29932296161153,4.81078423675682,5.56643322442906,1.27426165729639,3.90650072313851,0.950452044448374,1.80690142893327,1.02389288923535,2.49861453104692,1.18388626022008,0.821127996921047,6.8546292696409,8.82552646085574,6.80674698249155,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,1.30979075497713,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.738651018262192,0,0,0,0,0,0,0,0,14.2872338989824,4.57851856868775,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,2.12961773587702,6.10795356625974,4.9594342217689,5.77543663258868,0.76228387266739,2.60279707715243,0,0.335032530668698,0.637938751653163,12.7331194071021,14.9580729602012,5.38740167466846,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,8.06395301879261,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.184161977871793,0,0,0,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.412164046590889,0.915694648183434,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,3.82318603571188,6.26611905891579,2.85878130549347,2.87953591160336,7.13320642311989,4.86028293514303,4.75875105776562,0.213648142254946,0,0.245040215981032,1.30062222588003,1.58696134274089,4.97992903438899,4.46393563640703,2.99369057149225,1.1490322207942,0.635020748171649,1.62310970137278,0.842391534340376,0.228234679033192,0.156679895773023,10.0253790836027,1.35433422241283,0.481764225311099,0.403599414382095,0.425846237690326,1.71752672377882,0.307240764308458,0,0,1.75849285861836,0,0,2.16364542780786,0.66614393599564,0,0.37428108081644,0.146508179271894,0,0.445773537109913,0,0.23874448473769,0,0,4.97073823883149,7.45547906975718,0.333926115068718,0.16480387422676,1.90012867315194,0.19924798825107,0.276283915531148,0.755798243562828,0,1.72318727645497,0,0.269605053441981,0,0,0.197286811273867,0,0,1.93866549219044,5.47331779154922,0,0,0,0,0,0,0,0.689486746482929,0,0.868124974666461,1.77148277162768,2.17073589525734,4.5774520895125,6.85591411573593,2.06883333267483,0.219385397153973,0.21787692703798,0.557694977114413,0.384751292518985,0.227884111694002,0,1.16684937732704,0,0,0,0,1.02193298195737,1.2558420511602,0,0,0,0,0.189753732724185,1.11255605286265,1.05499032264014,0.652931232636591,0,0.649165919226273,0,0.530745387020035,0,0,0.370691816839509,0.626531697032732,27.1626565912128,0,1.40558667435203,2.00700268137233,0.19566461893209,0,3.15667522279512,1.20990716048664,1.83643656978294,0.947798694427319,0,0.207376382794494,0,0,0.313932918407225,2.38944859545918,0,0,0.347119476670262,0,0.174118413160805,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0,0,0.353024506766001,0,0.137041924646751,0,6.01452561580848,1.36885967914362,0.0801588202515337,0.213452994739353,0.599428828746391,0.144090417154106,0.114536596165916,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| ||
|short_description=p@chr9:91985535..91985584,- | |||
}} | }} |
Latest revision as of 03:21, 1 August 2015
Short description: | p@chr9:91985535..91985584, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:91985535..91985584, - |
Coexpression cluster: | C460_Neutrophils_corpus_thalamus_substantia_parietal_globus_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.44e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.85e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-20 | 161 |
hematopoietic stem cell | 2.68e-20 | 168 |
nongranular leukocyte | 5.62e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 1.29e-18 | 120 |
hematopoietic cell | 4.29e-18 | 177 |
lymphocyte | 4.49e-18 | 53 |
common lymphoid progenitor | 4.49e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.52e-17 | 52 |
T cell | 2.10e-13 | 25 |
pro-T cell | 2.10e-13 | 25 |
mature alpha-beta T cell | 4.10e-13 | 18 |
alpha-beta T cell | 4.10e-13 | 18 |
immature T cell | 4.10e-13 | 18 |
mature T cell | 4.10e-13 | 18 |
immature alpha-beta T cell | 4.10e-13 | 18 |
classical monocyte | 5.73e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-10 | 42 |
defensive cell | 7.28e-08 | 48 |
phagocyte | 7.28e-08 | 48 |
CD4-positive, alpha-beta T cell | 1.51e-07 | 6 |
myeloid leukocyte | 2.02e-07 | 72 |
CD8-positive, alpha-beta T cell | 8.75e-07 | 11 |