FFCP PHASE1:Hg19::chr9:90728611..90728622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:90728611..90728622,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr9:90728611..90728622,+ | |description=CAGE_peak_at_chr9:90728611..90728622,+ | ||
|id=chr9:90728611..90728622,+ | |id=chr9:90728611..90728622,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.31e-08!7;CL:0000586!1.31e-08!7 | |ontology_enrichment_celltype=CL:0000039!1.31e-08!7;CL:0000586!1.31e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.85e-12;2!CL:0000137;1.85e-12;2!CL:0000092;1.85e-12;2!CL:0000322;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.85e-12,2;CL:0000137,1.85e-12,2;CL:0000092,1.85e-12,2;CL:0000322,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.06e-12!8;DOID:0060085!7.50e-08!1;DOID:3165!7.50e-08!1;DOID:0060121!7.50e-08!1;DOID:2438!7.50e-08!1;DOID:4418!7.50e-08!1;DOID:2355!9.71e-08!1;DOID:0050619!2.21e-07!1;DOID:1357!2.21e-07!1;DOID:6193!3.40e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.67e-23;1!DOID:3165;1.67e-23;1!DOID:0060121;1.67e-23;1!DOID:2438;1.67e-23;1!DOID:4418;1.67e-23;1!DOID:2355;4.10e-23;1!DOID:200;1.85e-12;2!DOID:4305;1.85e-12;2!DOID:74;2.90e-12;2!DOID:3910;2.90e-12;2!DOID:0060058;1.01e-09;10!DOID:0060072;7.27e-07;4!DOID:1287;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.67e-23,1;DOID:3165,1.67e-23,1;DOID:0060121,1.67e-23,1;DOID:2438,1.67e-23,1;DOID:4418,1.67e-23,1;DOID:2355,4.10e-23,1;DOID:200,1.85e-12,2;DOID:4305,1.85e-12,2;DOID:74,2.90e-12,2;DOID:3910,3.62e-12,2;DOID:0060058,9.24e-10,10;DOID:0060072,7.27e-07,4;DOID:1287,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.93e-07!8;UBERON:0001764!2.21e-07!1;UBERON:0001825!2.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.90e-12;2!UBERON:0002173;2.90e-12;2!UBERON:0002186;2.90e-12;2!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0000014;7.27e-07;4!UBERON:0009856;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0000014,7.27e-07,4 | |||
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|short_description=p@chr9:90728611..90728622,+ | |short_description=p@chr9:90728611..90728622,+ | ||
}} | }} |
Latest revision as of 03:16, 1 August 2015
Short description: | p@chr9:90728611..90728622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:90728611..90728622, + |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.85e-12 | 2 |
osteocyte | 1.85e-12 | 2 |
osteoclast | 1.85e-12 | 2 |
pneumocyte | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.62e-12 | 2 |
alveolar duct | 3.62e-12 | 2 |
bronchiole | 3.62e-12 | 2 |
pulmonary alveolus epithelium | 1.51e-08 | 3 |
alveolus | 1.51e-08 | 3 |
pulmonary lobule | 1.51e-08 | 3 |
lobule | 1.51e-08 | 3 |
alveolus of lung | 1.51e-08 | 3 |
alveolar system | 1.51e-08 | 3 |
pulmonary acinus | 1.51e-08 | 3 |
alveolar sac | 1.51e-08 | 3 |
alveolar wall | 1.51e-08 | 3 |
zone of skin | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.67e-23 | 1 |
skin benign neoplasm | 1.67e-23 | 1 |
integumentary system benign neoplasm | 1.67e-23 | 1 |
dermis tumor | 1.67e-23 | 1 |
cutaneous fibrous histiocytoma | 1.67e-23 | 1 |
anemia | 4.10e-23 | 1 |
giant cell tumor | 1.85e-12 | 2 |
bone giant cell tumor | 1.85e-12 | 2 |
hematopoietic system disease | 2.90e-12 | 2 |
lung adenocarcinoma | 3.62e-12 | 2 |
lymphoma | 9.24e-10 | 10 |
benign neoplasm | 7.27e-07 | 4 |
cardiovascular system disease | 9.11e-07 | 4 |