FFCP PHASE1:Hg19::chr9:77114317..77114328,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-274bp_to_ENST00000417576_5end | |association_with_transcript=-274bp_to_ENST00000417576_5end | ||
|cluster_id=chr9:77114317..77114328,- | |||
|coexpression_cluster_id=C990 | |coexpression_cluster_id=C990 | ||
|description=CAGE_peak_3_at_ENST00000417576_5end | |description=CAGE_peak_3_at_ENST00000417576_5end | ||
|id=chr9:77114317..77114328,- | |id=chr9:77114317..77114328,- | ||
|ontology_enrichment_celltype=CL:0002195;9.07e-18;2!CL:0002571;9.07e-18;2 | |ontology_enrichment_celltype=CL:0002195!2.92e-10!2;CL:0002571!2.92e-10!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002195;9.07e-18;2!CL:0002571;9.07e-18;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,9.07e-18,2;CL:0002571,9.07e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002902;1.84e-34;1!UBERON:0009899;1.84e-34;1!UBERON:0002021;2.08e-27;5!UBERON:0001905;9.07e-18;2!UBERON:0002757;9.07e-18;2!UBERON:0010134;9.07e-18;2!UBERON:0005408;9.07e-18;2!UBERON:0001899;9.07e-18;2!UBERON:0003296;1.44e-09;4!UBERON:0010133;1.44e-09;4!UBERON:0002784;1.44e-09;4!UBERON:0000955;6.35e-08;68!UBERON:0001950;2.60e-07;20!UBERON:0002619;9.39e-07;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!4.23e-39!20;UBERON:0002619!2.03e-35!22;UBERON:0001869!2.40e-31!32;UBERON:0000956!5.86e-31!25;UBERON:0000203!5.86e-31!25;UBERON:0002780!1.10e-30!41;UBERON:0001890!1.10e-30!41;UBERON:0006240!1.10e-30!41;UBERON:0003080!7.19e-30!42;UBERON:0003056!1.17e-29!61;UBERON:0001893!2.45e-29!34;UBERON:0002791!2.05e-26!33;UBERON:0002020!1.47e-25!34;UBERON:0003528!1.47e-25!34;UBERON:0007023!6.73e-24!115;UBERON:0003075!1.26e-21!86;UBERON:0007284!1.26e-21!86;UBERON:0001049!5.06e-21!57;UBERON:0005068!5.06e-21!57;UBERON:0006241!5.06e-21!57;UBERON:0007135!5.06e-21!57;UBERON:0000955!7.66e-21!69;UBERON:0006238!7.66e-21!69;UBERON:0002346!1.96e-20!90;UBERON:0002616!3.54e-20!59;UBERON:0005743!1.48e-19!86;UBERON:0000073!5.23e-19!94;UBERON:0001016!5.23e-19!94;UBERON:0001017!9.24e-19!82;UBERON:0000200!4.25e-18!6;UBERON:0000033!4.64e-18!123;UBERON:0000153!5.94e-17!129;UBERON:0007811!5.94e-17!129;UBERON:0002021!2.56e-15!5;UBERON:0004121!8.16e-14!169;UBERON:0001871!1.75e-13!7;UBERON:0002771!2.00e-13!3;UBERON:0000924!2.35e-13!173;UBERON:0006601!2.35e-13!173;UBERON:0001905!2.55e-10!2;UBERON:0002757!2.55e-10!2;UBERON:0010134!2.55e-10!2;UBERON:0002784!2.55e-10!2;UBERON:0005408!2.55e-10!2;UBERON:0001899!2.55e-10!2;UBERON:0001872!1.26e-08!5;UBERON:0000064!1.56e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.84e-34;1!UBERON:0009899;1.84e-34;1!UBERON:0002021;2.08e-27;5!UBERON:0001905;9.07e-18;2!UBERON:0002757;9.07e-18;2!UBERON:0010134;9.07e-18;2!UBERON:0005408;9.07e-18;2!UBERON:0001899;9.07e-18;2!UBERON:0003296;1.44e-09;4!UBERON:0010133;1.44e-09;4!UBERON:0002784;1.44e-09;4!UBERON:0000955;6.35e-08;68!UBERON:0001950;2.60e-07;20!UBERON:0002619;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,1.84e-34,1;UBERON:0009899,1.84e-34,1;UBERON:0002021,1.82e-27,5;UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0000955,4.00e-08,68;UBERON:0006238,4.00e-08,68;UBERON:0002780,7.94e-08,41;UBERON:0001890,7.94e-08,41;UBERON:0003080,7.94e-08,41;UBERON:0006240,7.94e-08,41;UBERON:0001950,2.52e-07,20;UBERON:0001017,6.33e-07,81;UBERON:0002619,9.13e-07,22 | |||
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| ||
|short_description=p3@ENST00000417576 | |short_description=p3@ENST00000417576 | ||
}} | }} |
Latest revision as of 02:44, 1 August 2015
Short description: | p3@ENST00000417576 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000417576_5end |
Coexpression cluster: | C990_pineal_occipital_merkel_Lens_medial_parietal_middle |
Association with transcript: | -274bp_to_ENST00000417576_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 9.07e-18 | 2 |
hepatic mesenchymal stem cell | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital pole | 1.84e-34 | 1 |
pole of cerebral hemisphere | 1.84e-34 | 1 |
occipital lobe | 1.82e-27 | 5 |
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
brain | 4.00e-08 | 68 |
future brain | 4.00e-08 | 68 |
regional part of forebrain | 7.94e-08 | 41 |
forebrain | 7.94e-08 | 41 |
anterior neural tube | 7.94e-08 | 41 |
future forebrain | 7.94e-08 | 41 |
neocortex | 2.52e-07 | 20 |
central nervous system | 6.33e-07 | 81 |
regional part of cerebral cortex | 9.13e-07 | 22 |